RNA–Protein interactions for RNA: ENST00000378198.8

TDP2-202, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TDP2, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-202ENST00000378198 IRX3P78415 501 aaPredicted RBP19.07■□□□□ 0.64
TDP2-202ENST00000378198 TFDP1Q14186 410 aa19.07■□□□□ 0.64
TDP2-202ENST00000378198 LVRNQ6Q4G3 990 aa19.07■□□□□ 0.64
TDP2-202ENST00000378198 C3orf62Q6ZUJ4 267 aa19.07■□□□□ 0.64
TDP2-202ENST00000378198 XYLT1Q86Y38 959 aa19.07■□□□□ 0.64
TDP2-202ENST00000378198 KIAA0319LQ8IZA0 1049 aa19.07■□□□□ 0.64
TDP2-202ENST00000378198 LRRC71Q8N4P6 559 aa19.07■□□□□ 0.64
TDP2-202ENST00000378198 KCTD6Q8NC69 237 aa19.07■□□□□ 0.64
TDP2-202ENST00000378198 CMASQ8NFW8 434 aaPredicted RBP19.07■□□□□ 0.64
TDP2-202ENST00000378198 SPOCK2Q92563 424 aa19.07■□□□□ 0.64
TDP2-202ENST00000378198 FZD8Q9H461 694 aa19.07■□□□□ 0.64
TDP2-202ENST00000378198 CXorf56Q9H5V9 222 aa19.07■□□□□ 0.64
TDP2-202ENST00000378198 SYNCQ9H7C4 482 aa19.07■□□□□ 0.64
TDP2-202ENST00000378198 SLCO1B3Q9NPD5 702 aa19.07■□□□□ 0.64
TDP2-202ENST00000378198 METTL5Q9NRN9 209 aaKnown RBP19.07■□□□□ 0.64
TDP2-202ENST00000378198 BTBD7Q9P203 1132 aa19.07■□□□□ 0.64
TDP2-202ENST00000378198 TJP2Q9UDY2 1190 aa19.07■□□□□ 0.64
TDP2-202ENST00000378198 TRIM33Q9UPN9 1127 aa19.07■□□□□ 0.64
TDP2-202ENST00000378198 APOC4-APOC2K7ER74 178 aa19.06■□□□□ 0.64
TDP2-202ENST00000378198 HGSO14964 777 aaPredicted RBP19.06■□□□□ 0.64
TDP2-202ENST00000378198 LGR5O75473 907 aa19.06■□□□□ 0.64
TDP2-202ENST00000378198 APOC2P02655 101 aa19.06■□□□□ 0.64
TDP2-202ENST00000378198 RAD23BP54727 409 aa19.06■□□□□ 0.64
TDP2-202ENST00000378198 ATP11AP98196 1134 aa19.06■□□□□ 0.64
TDP2-202ENST00000378198 LY6KQ17RY6 165 aa19.06■□□□□ 0.64
TDP2-202ENST00000378198 PARP6Q2NL67 630 aa19.06■□□□□ 0.64
TDP2-202ENST00000378198 TLDC1Q6P9B6 456 aa19.06■□□□□ 0.64
TDP2-202ENST00000378198 PLPPR4Q7Z2D5 763 aa19.06■□□□□ 0.64
TDP2-202ENST00000378198 RFX6Q8HWS3 928 aa19.06■□□□□ 0.64
TDP2-202ENST00000378198 PALM2Q8IXS6 379 aa19.06■□□□□ 0.64
TDP2-202ENST00000378198 FBXO36Q8NEA4 188 aa19.06■□□□□ 0.64
TDP2-202ENST00000378198 ALKBH8Q96BT7 664 aaKnown RBP19.06■□□□□ 0.64
TDP2-202ENST00000378198 ERP27Q96DN0 273 aa19.06■□□□□ 0.64
TDP2-202ENST00000378198 STAMBPL1Q96FJ0 436 aa19.06■□□□□ 0.64
TDP2-202ENST00000378198 CHKBQ9Y259 395 aa19.06■□□□□ 0.64
TDP2-202ENST00000378198 RNF8O76064 485 aa19.05■□□□□ 0.64
TDP2-202ENST00000378198 KRT19P08727 400 aa19.05■□□□□ 0.64
TDP2-202ENST00000378198 ATP2A2P16615 1042 aaKnown RBP19.05■□□□□ 0.64
TDP2-202ENST00000378198 IBSPP21815 317 aaPredicted RBP19.05■□□□□ 0.64
TDP2-202ENST00000378198 MARK3P27448 753 aa19.05■□□□□ 0.64
TDP2-202ENST00000378198 PSMC4P43686 418 aa19.05■□□□□ 0.64
TDP2-202ENST00000378198 RAP1GAPP47736 663 aa19.05■□□□□ 0.64
TDP2-202ENST00000378198 GAD2Q05329 585 aa19.05■□□□□ 0.64
TDP2-202ENST00000378198 MSS51Q4VC12 460 aa19.05■□□□□ 0.64
TDP2-202ENST00000378198 SPDYAQ5MJ70 313 aa19.05■□□□□ 0.64
TDP2-202ENST00000378198 UNC45BQ8IWX7 931 aa19.05■□□□□ 0.64
TDP2-202ENST00000378198 PDIK1LQ8N165 341 aa19.05■□□□□ 0.64
TDP2-202ENST00000378198 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.05■□□□□ 0.64
TDP2-202ENST00000378198 C10orf82Q8WW14 230 aa19.05■□□□□ 0.64
TDP2-202ENST00000378198 ZNF75CPQ92670 426 aaPredicted RBP19.05■□□□□ 0.64
TDP2-202ENST00000378198 CPXM1Q96SM3 734 aa19.05■□□□□ 0.64
TDP2-202ENST00000378198 PAFAH2Q99487 392 aa19.05■□□□□ 0.64
TDP2-202ENST00000378198 GPR20Q99678 358 aa19.05■□□□□ 0.64
TDP2-202ENST00000378198 C10orf88Q9H8K7 445 aa19.05■□□□□ 0.64
TDP2-202ENST00000378198 RPF1Q9H9Y2 349 aaKnown RBP19.05■□□□□ 0.64
TDP2-202ENST00000378198 NOP53Q9NZM5 478 aaKnown RBP19.05■□□□□ 0.64
TDP2-202ENST00000378198 ZBTB42B2RXF5 422 aa19.05■□□□□ 0.64
TDP2-202ENST00000378198 WFS1O76024 890 aa19.05■□□□□ 0.64
TDP2-202ENST00000378198 ANP32DO95626 131 aa19.05■□□□□ 0.64
TDP2-202ENST00000378198 EIF3EP60228 445 aaKnown RBP19.05■□□□□ 0.64
TDP2-202ENST00000378198 OSTNP61366 133 aa19.05■□□□□ 0.64
TDP2-202ENST00000378198 SEPT7Q16181 437 aaKnown RBP19.05■□□□□ 0.64
TDP2-202ENST00000378198 TMEM132AQ24JP5 1023 aa19.05■□□□□ 0.64
TDP2-202ENST00000378198 NCAPG2Q86XI2 1143 aa19.05■□□□□ 0.64
TDP2-202ENST00000378198 EMC1Q8N766 993 aa19.05■□□□□ 0.64
TDP2-202ENST00000378198 INPP5DQ92835 1189 aa19.05■□□□□ 0.64
TDP2-202ENST00000378198 THOC1Q96FV9 657 aaKnown RBP19.05■□□□□ 0.64
TDP2-202ENST00000378198 MPHOSPH6Q99547 160 aaKnown RBP19.05■□□□□ 0.64
TDP2-202ENST00000378198 LRMDAQ9H2I8 198 aa19.05■□□□□ 0.64
TDP2-202ENST00000378198 RSAD1Q9HA92 442 aa19.05■□□□□ 0.64
TDP2-202ENST00000378198 CYLDQ9NQC7 956 aa19.05■□□□□ 0.64
TDP2-202ENST00000378198 L3MBTL1Q9Y468 752 aa19.05■□□□□ 0.64
TDP2-202ENST00000378198 LTBP3Q9NS15 1303 aa19.04■□□□□ 0.64
TDP2-202ENST00000378198 GOLGB1Q14789 3259 aaKnown RBP19.04■□□□□ 0.64
TDP2-202ENST00000378198 TM9SF1O15321 606 aa19.04■□□□□ 0.64
TDP2-202ENST00000378198 ERBB2P04626 1255 aa19.04■□□□□ 0.64
TDP2-202ENST00000378198 CD48P09326 243 aa19.04■□□□□ 0.64
TDP2-202ENST00000378198 GABRB2P47870 512 aa19.04■□□□□ 0.64
TDP2-202ENST00000378198 EFTUD2Q15029 972 aaKnown RBP eCLIP19.04■□□□□ 0.641e-8■■■■■ 36.9
TDP2-202ENST00000378198 TREML2Q5T2D2 321 aa19.04■□□□□ 0.64
TDP2-202ENST00000378198 EEPD1Q7L9B9 569 aa19.04■□□□□ 0.64
TDP2-202ENST00000378198 AGGF1Q8N302 714 aaeCLIP19.04■□□□□ 0.64
TDP2-202ENST00000378198 ZNF398Q8TD17 642 aa19.04■□□□□ 0.64
TDP2-202ENST00000378198 MZB1Q8WU39 189 aa19.04■□□□□ 0.64
TDP2-202ENST00000378198 MCRS1Q96EZ8 462 aa19.04■□□□□ 0.64
TDP2-202ENST00000378198 ASNSD1Q9NWL6 643 aa19.04■□□□□ 0.64
TDP2-202ENST00000378198 PCSK1NQ9UHG2 260 aa19.04■□□□□ 0.64
TDP2-202ENST00000378198 XPO7Q9UIA9 1087 aaKnown RBP19.04■□□□□ 0.64
TDP2-202ENST00000378198 POLR2AP24928 1970 aaKnown RBP19.04■□□□□ 0.64
TDP2-202ENST00000378198 A8MUI8 341 aa19.04■□□□□ 0.64
TDP2-202ENST00000378198 INO80B-WBP1J3KQ70 363 aa19.04■□□□□ 0.64
TDP2-202ENST00000378198 NOP56O00567 594 aaKnown RBP19.04■□□□□ 0.64
TDP2-202ENST00000378198 MCF2LO15068 1137 aa19.04■□□□□ 0.64
TDP2-202ENST00000378198 PEX10O60683 326 aa19.04■□□□□ 0.64
TDP2-202ENST00000378198 TRUB2O95900 331 aaKnown RBP19.04■□□□□ 0.64
TDP2-202ENST00000378198 MIPP30301 263 aa19.04■□□□□ 0.64
TDP2-202ENST00000378198 RNASELQ05823 741 aaKnown RBP19.04■□□□□ 0.64
TDP2-202ENST00000378198 PTPN11Q06124 597 aaPredicted RBP19.04■□□□□ 0.64
TDP2-202ENST00000378198 DPYSL3Q14195 570 aa19.04■□□□□ 0.64
TDP2-202ENST00000378198 BBS9Q3SYG4 887 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms