RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 DDR2Q16832 855 aa14.05□□□□□ -0.16
CKAP2-202ENST00000378034 FILIP1LQ4L180 1135 aa14.05□□□□□ -0.16
CKAP2-202ENST00000378034 ARHGAP17Q68EM7 881 aa14.05□□□□□ -0.16
CKAP2-202ENST00000378034 TMEM270Q6UE05 265 aa14.05□□□□□ -0.16
CKAP2-202ENST00000378034 PDZD4Q76G19 769 aaPredicted RBP14.05□□□□□ -0.16
CKAP2-202ENST00000378034 LUZP1Q86V48 1076 aa14.05□□□□□ -0.16
CKAP2-202ENST00000378034 C12orf29Q8N999 325 aa14.05□□□□□ -0.16
CKAP2-202ENST00000378034 SLC2A14Q8TDB8 520 aa14.05□□□□□ -0.16
CKAP2-202ENST00000378034 ACSF2Q96CM8 615 aaPredicted RBP14.05□□□□□ -0.16
CKAP2-202ENST00000378034 UXTQ9UBK9 157 aaPredicted RBP14.05□□□□□ -0.16
CKAP2-202ENST00000378034 SPTBN5Q9NRC6 3674 aaKnown RBP14.05□□□□□ -0.16
CKAP2-202ENST00000378034 C19orf67A6NJJ6 358 aa14.05□□□□□ -0.16
CKAP2-202ENST00000378034 LOC730098B7Z3J9 87 aa14.05□□□□□ -0.16
CKAP2-202ENST00000378034 CLDN5O00501 218 aa14.05□□□□□ -0.16
CKAP2-202ENST00000378034 NOL4O94818 638 aa14.05□□□□□ -0.16
CKAP2-202ENST00000378034 VDRP11473 427 aa14.05□□□□□ -0.16
CKAP2-202ENST00000378034 CCDC130P13994 396 aa14.05□□□□□ -0.16
CKAP2-202ENST00000378034 CDR1P51861 262 aa14.05□□□□□ -0.16
CKAP2-202ENST00000378034 UBXN1Q04323 297 aa14.05□□□□□ -0.16
CKAP2-202ENST00000378034 ZP2Q05996 745 aa14.05□□□□□ -0.16
CKAP2-202ENST00000378034 SGO2Q562F6 1265 aa14.05□□□□□ -0.16
CKAP2-202ENST00000378034 PRSS36Q5K4E3 855 aa14.05□□□□□ -0.16
CKAP2-202ENST00000378034 KLHDC7AQ5VTJ3 777 aa14.05□□□□□ -0.16
CKAP2-202ENST00000378034 DPY19L2P1Q6NXN4 242 aa14.05□□□□□ -0.16
CKAP2-202ENST00000378034 PLCD3Q8N3E9 789 aa14.05□□□□□ -0.16
CKAP2-202ENST00000378034 ADAMTS19Q8TE59 1207 aa14.05□□□□□ -0.16
CKAP2-202ENST00000378034 GIPC2Q8TF65 315 aa14.05□□□□□ -0.16
CKAP2-202ENST00000378034 TRMT2BQ96GJ1 504 aaKnown RBP14.05□□□□□ -0.16
CKAP2-202ENST00000378034 MYRFLQ96LU7 910 aa14.05□□□□□ -0.16
CKAP2-202ENST00000378034 ERGIC2Q96RQ1 377 aa14.05□□□□□ -0.16
CKAP2-202ENST00000378034 NOTCH4Q99466 2003 aa14.05□□□□□ -0.16
CKAP2-202ENST00000378034 LRRC3Q9BY71 257 aa14.05□□□□□ -0.16
CKAP2-202ENST00000378034 CSNK1G1Q9HCP0 422 aa14.05□□□□□ -0.16
CKAP2-202ENST00000378034 DMAP1Q9NPF5 467 aaPredicted RBP14.05□□□□□ -0.16
CKAP2-202ENST00000378034 FAM49BQ9NUQ9 324 aa14.05□□□□□ -0.16
CKAP2-202ENST00000378034 MRPS23Q9Y3D9 190 aaKnown RBP14.05□□□□□ -0.16
CKAP2-202ENST00000378034 SLC38A8A6NNN8 435 aa14.04□□□□□ -0.16
CKAP2-202ENST00000378034 AP1G2O75843 785 aa14.04□□□□□ -0.16
CKAP2-202ENST00000378034 FAM200BP0CF97 657 aa14.04□□□□□ -0.16
CKAP2-202ENST00000378034 ZNF132P52740 706 aa14.04□□□□□ -0.16
CKAP2-202ENST00000378034 NTHL1P78549 312 aa14.04□□□□□ -0.16
CKAP2-202ENST00000378034 STILQ15468 1287 aa14.04□□□□□ -0.16
CKAP2-202ENST00000378034 TMC8Q8IU68 726 aa14.04□□□□□ -0.16
CKAP2-202ENST00000378034 RBBP8NLQ8NC74 664 aaPredicted RBP14.04□□□□□ -0.16
CKAP2-202ENST00000378034 SHC3Q92529 594 aa14.04□□□□□ -0.16
CKAP2-202ENST00000378034 LSM14BQ9BX40 385 aaKnown RBP14.04□□□□□ -0.16
CKAP2-202ENST00000378034 DNAJC12Q9UKB3 198 aa14.04□□□□□ -0.16
CKAP2-202ENST00000378034 TCF20Q9UGU0 1960 aaKnown RBP14.04□□□□□ -0.16
CKAP2-202ENST00000378034 F8VP50 259 aa14.03□□□□□ -0.16
CKAP2-202ENST00000378034 HMGA1P17096 107 aaKnown RBP14.03□□□□□ -0.16
CKAP2-202ENST00000378034 GPR15P49685 360 aa14.03□□□□□ -0.16
CKAP2-202ENST00000378034 PPP1R26Q5T8A7 1209 aaPredicted RBP14.03□□□□□ -0.16
CKAP2-202ENST00000378034 DENND5BQ6ZUT9 1274 aa14.03□□□□□ -0.16
CKAP2-202ENST00000378034 ZDHHC14Q8IZN3 488 aa14.03□□□□□ -0.16
CKAP2-202ENST00000378034 HS6ST3Q8IZP7 471 aa14.03□□□□□ -0.16
CKAP2-202ENST00000378034 TDRD5Q8NAT2 981 aaKnown RBP14.03□□□□□ -0.16
CKAP2-202ENST00000378034 RPGRIP1Q96KN7 1286 aa14.03□□□□□ -0.16
CKAP2-202ENST00000378034 DUSP16Q9BY84 665 aa14.03□□□□□ -0.16
CKAP2-202ENST00000378034 PNPLA8Q9NP80 782 aa14.03□□□□□ -0.16
CKAP2-202ENST00000378034 RTN4Q9NQC3 1192 aaKnown RBP14.03□□□□□ -0.16
CKAP2-202ENST00000378034 KRT82Q9NSB4 513 aa14.03□□□□□ -0.16
CKAP2-202ENST00000378034 COMMD8Q9NX08 183 aa14.03□□□□□ -0.16
CKAP2-202ENST00000378034 SIK3Q9Y2K2 1263 aa14.03□□□□□ -0.16
CKAP2-202ENST00000378034 GREB1Q4ZG55 1949 aa14.03□□□□□ -0.16
CKAP2-202ENST00000378034 SERPINC1P01008 464 aa14.03□□□□□ -0.16
CKAP2-202ENST00000378034 MYL4P12829 197 aa14.03□□□□□ -0.16
CKAP2-202ENST00000378034 UCHL3P15374 230 aa14.03□□□□□ -0.16
CKAP2-202ENST00000378034 CD19P15391 556 aa14.03□□□□□ -0.16
CKAP2-202ENST00000378034 ADORA2BP29275 332 aa14.03□□□□□ -0.16
CKAP2-202ENST00000378034 CDC25CP30307 473 aa14.03□□□□□ -0.16
CKAP2-202ENST00000378034 SLC8A3P57103 927 aa14.03□□□□□ -0.16
CKAP2-202ENST00000378034 APBA1Q02410 837 aa14.03□□□□□ -0.16
CKAP2-202ENST00000378034 ARHGAP44Q17R89 818 aa14.03□□□□□ -0.16
CKAP2-202ENST00000378034 GJB7Q6PEY0 223 aa14.03□□□□□ -0.16
CKAP2-202ENST00000378034 ANKRD52Q8NB46 1076 aa14.03□□□□□ -0.16
CKAP2-202ENST00000378034 GPR152Q8TDT2 470 aa14.03□□□□□ -0.16
CKAP2-202ENST00000378034 SMOQ99835 787 aa14.03□□□□□ -0.16
CKAP2-202ENST00000378034 UBXN6Q9BZV1 441 aa14.03□□□□□ -0.16
CKAP2-202ENST00000378034 GPR88Q9GZN0 384 aa14.03□□□□□ -0.16
CKAP2-202ENST00000378034 GDE1Q9NZC3 331 aa14.03□□□□□ -0.16
CKAP2-202ENST00000378034 EPS15L1Q9UBC2 864 aa14.03□□□□□ -0.16
CKAP2-202ENST00000378034 ZMYM5Q9UJ78 669 aa14.03□□□□□ -0.16
CKAP2-202ENST00000378034 CDH7Q9ULB5 785 aa14.03□□□□□ -0.16
CKAP2-202ENST00000378034 DOCK6Q96HP0 2047 aa14.02□□□□□ -0.16
CKAP2-202ENST00000378034 A0A1B0GTH6 734 aa14.02□□□□□ -0.16
CKAP2-202ENST00000378034 SOBPA7XYQ1 873 aa14.02□□□□□ -0.16
CKAP2-202ENST00000378034 RNF225M0QZC1 329 aaPredicted RBP14.02□□□□□ -0.16
CKAP2-202ENST00000378034 RTN3O95197 1032 aaPredicted RBP14.02□□□□□ -0.16
CKAP2-202ENST00000378034 KRT5P13647 590 aa14.02□□□□□ -0.16
CKAP2-202ENST00000378034 NPR3P17342 541 aa14.02□□□□□ -0.16
CKAP2-202ENST00000378034 GBP2P32456 591 aaPredicted RBP14.02□□□□□ -0.16
CKAP2-202ENST00000378034 CACNA2D1P54289 1103 aa14.02□□□□□ -0.16
CKAP2-202ENST00000378034 SYCP1Q15431 976 aa14.02□□□□□ -0.16
CKAP2-202ENST00000378034 CNGA2Q16280 664 aa14.02□□□□□ -0.16
CKAP2-202ENST00000378034 SLC5A9Q2M3M2 681 aa14.02□□□□□ -0.16
CKAP2-202ENST00000378034 SDHAF4Q5VUM1 108 aa14.02□□□□□ -0.16
CKAP2-202ENST00000378034 CLEC20AQ6ZU45 233 aa14.02□□□□□ -0.16
CKAP2-202ENST00000378034 GET4Q7L5D6 327 aaPredicted RBP14.02□□□□□ -0.16
CKAP2-202ENST00000378034 NUP93Q8N1F7 819 aa14.02□□□□□ -0.16
CKAP2-202ENST00000378034 ITFG1Q8TB96 612 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms