RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 ASAP1Q9ULH1 1129 aa5.14□□□□□ -1.59
PCDH9-201ENST00000377861 QSOX1O00391 747 aa5.14□□□□□ -1.59
PCDH9-201ENST00000377861 KPNA4O00629 521 aaPredicted RBP5.14□□□□□ -1.59
PCDH9-201ENST00000377861 GCLCP48506 637 aaPredicted RBP5.14□□□□□ -1.59
PCDH9-201ENST00000377861 MMRN1Q13201 1228 aa5.14□□□□□ -1.59
PCDH9-201ENST00000377861 VSIG10LQ86VR7 867 aa5.14□□□□□ -1.59
PCDH9-201ENST00000377861 GTF2IP78347 998 aa5.14□□□□□ -1.59
PCDH9-201ENST00000377861 PSMD5Q16401 504 aa5.14□□□□□ -1.59
PCDH9-201ENST00000377861 CNDP1Q96KN2 507 aa5.14□□□□□ -1.59
PCDH9-201ENST00000377861 VPS28Q9UK41 221 aa5.14□□□□□ -1.59
PCDH9-201ENST00000377861 SUFUQ9UMX1 484 aa5.14□□□□□ -1.59
PCDH9-201ENST00000377861 H7C0C1 242 aa5.14□□□□□ -1.59
PCDH9-201ENST00000377861 ARHGEF9O43307 516 aa5.14□□□□□ -1.59
PCDH9-201ENST00000377861 C6orf222P0C671 652 aaPredicted RBP5.14□□□□□ -1.59
PCDH9-201ENST00000377861 GYG1P46976 350 aa5.14□□□□□ -1.59
PCDH9-201ENST00000377861 ATP5OP48047 213 aa5.14□□□□□ -1.59
PCDH9-201ENST00000377861 SCUBE1Q8IWY4 988 aa5.14□□□□□ -1.59
PCDH9-201ENST00000377861 DIP2AQ14689 1571 aa5.14□□□□□ -1.59
PCDH9-201ENST00000377861 DPYSQ14117 519 aa5.14□□□□□ -1.59
PCDH9-201ENST00000377861 ERO1BQ86YB8 467 aa5.14□□□□□ -1.59
PCDH9-201ENST00000377861 ERLEC1Q96DZ1 483 aa5.14□□□□□ -1.59
PCDH9-201ENST00000377861 CD3EAPO15446 510 aaKnown RBP5.14□□□□□ -1.59
PCDH9-201ENST00000377861 NIM1KQ8IY84 436 aa5.14□□□□□ -1.59
PCDH9-201ENST00000377861 C4orf32Q8N8J7 132 aa5.14□□□□□ -1.59
PCDH9-201ENST00000377861 TRIM56Q9BRZ2 755 aaKnown RBP5.14□□□□□ -1.59
PCDH9-201ENST00000377861 NOD2Q9HC29 1040 aa5.14□□□□□ -1.59
PCDH9-201ENST00000377861 STXBP5LQ9Y2K9 1186 aa5.14□□□□□ -1.59
PCDH9-201ENST00000377861 PUS3Q9BZE2 481 aaKnown RBP5.14□□□□□ -1.59
PCDH9-201ENST00000377861 EBF2Q9HAK2 575 aa5.14□□□□□ -1.59
PCDH9-201ENST00000377861 TIFABQ6ZNK6 161 aa5.13□□□□□ -1.59
PCDH9-201ENST00000377861 TBC1D1Q86TI0 1168 aaPredicted RBP5.13□□□□□ -1.59
PCDH9-201ENST00000377861 LRRC57Q8N9N7 239 aa5.13□□□□□ -1.59
PCDH9-201ENST00000377861 HM13Q8TCT9 377 aa5.13□□□□□ -1.59
PCDH9-201ENST00000377861 L3MBTL3Q96JM7 780 aaPredicted RBP5.13□□□□□ -1.59
PCDH9-201ENST00000377861 ARHGAP20Q9P2F6 1191 aa5.13□□□□□ -1.59
PCDH9-201ENST00000377861 PTPN21Q16825 1174 aa5.13□□□□□ -1.59
PCDH9-201ENST00000377861 ZNF354CQ86Y25 554 aa5.13□□□□□ -1.59
PCDH9-201ENST00000377861 REM2Q8IYK8 340 aaPredicted RBP5.13□□□□□ -1.59
PCDH9-201ENST00000377861 SLC40A1Q9NP59 571 aa5.13□□□□□ -1.59
PCDH9-201ENST00000377861 NIF3L1Q9GZT8 377 aa5.13□□□□□ -1.59
PCDH9-201ENST00000377861 AGO2Q9UKV8 859 aaKnown RBP5.13□□□□□ -1.59
PCDH9-201ENST00000377861 BBIP1A8MTZ0 92 aa5.13□□□□□ -1.59
PCDH9-201ENST00000377861 FAM25AB3EWG3 89 aa5.13□□□□□ -1.59
PCDH9-201ENST00000377861 FAM25CB3EWG5 89 aa5.13□□□□□ -1.59
PCDH9-201ENST00000377861 FAM25GB3EWG6 89 aa5.13□□□□□ -1.59
PCDH9-201ENST00000377861 LDOC1O95751 146 aaPredicted RBP5.13□□□□□ -1.59
PCDH9-201ENST00000377861 STAU1O95793 577 aaKnown RBP5.13□□□□□ -1.59
PCDH9-201ENST00000377861 S100BP04271 92 aaPredicted RBP5.13□□□□□ -1.59
PCDH9-201ENST00000377861 TGFB2P61812 414 aa5.13□□□□□ -1.59
PCDH9-201ENST00000377861 KYNUQ16719 465 aa5.13□□□□□ -1.59
PCDH9-201ENST00000377861 ETNPPLQ8TBG4 499 aa5.13□□□□□ -1.59
PCDH9-201ENST00000377861 PSMD12O00232 456 aaPredicted RBP5.13□□□□□ -1.59
PCDH9-201ENST00000377861 RECQL5O94762 991 aaPredicted RBP5.13□□□□□ -1.59
PCDH9-201ENST00000377861 KRT20P35900 424 aa5.13□□□□□ -1.59
PCDH9-201ENST00000377861 CSE1LP55060 971 aaKnown RBP5.13□□□□□ -1.59
PCDH9-201ENST00000377861 SNX30Q5VWJ9 437 aa5.13□□□□□ -1.59
PCDH9-201ENST00000377861 DCLK3Q9C098 648 aa5.13□□□□□ -1.59
PCDH9-201ENST00000377861 ALOX5P09917 674 aa5.13□□□□□ -1.59
PCDH9-201ENST00000377861 DLG4P78352 724 aa5.13□□□□□ -1.59
PCDH9-201ENST00000377861 MDH1BQ5I0G3 518 aa5.13□□□□□ -1.59
PCDH9-201ENST00000377861 EFCAB14O75071 495 aa5.13□□□□□ -1.59
PCDH9-201ENST00000377861 SOAT2O75908 522 aa5.13□□□□□ -1.59
PCDH9-201ENST00000377861 CCDC166P0CW27 439 aa5.13□□□□□ -1.59
PCDH9-201ENST00000377861 RALGPS1Q5JS13 557 aa5.13□□□□□ -1.59
PCDH9-201ENST00000377861 TTYH3Q9C0H2 523 aa5.13□□□□□ -1.59
PCDH9-201ENST00000377861 EIF2B3Q9NR50 452 aaKnown RBP5.13□□□□□ -1.59
PCDH9-201ENST00000377861 TBCCD1Q9NVR7 557 aa5.13□□□□□ -1.59
PCDH9-201ENST00000377861 RNF103-CHMP3A0A140T963 221 aa5.13□□□□□ -1.59
PCDH9-201ENST00000377861 ANXA1P04083 346 aa5.13□□□□□ -1.59
PCDH9-201ENST00000377861 PACS1Q6VY07 963 aa5.13□□□□□ -1.59
PCDH9-201ENST00000377861 ZNF560Q96MR9 790 aa5.13□□□□□ -1.59
PCDH9-201ENST00000377861 LRRC4BQ9NT99 713 aa5.13□□□□□ -1.59
PCDH9-201ENST00000377861 NAALADL1Q9UQQ1 740 aa5.13□□□□□ -1.59
PCDH9-201ENST00000377861 ZNF451Q9Y4E5 1061 aa5.13□□□□□ -1.59
PCDH9-201ENST00000377861 RARBP10826 455 aa5.13□□□□□ -1.59
PCDH9-201ENST00000377861 RAB25P57735 213 aa5.13□□□□□ -1.59
PCDH9-201ENST00000377861 ENDOVQ8N8Q3 282 aaKnown RBP5.13□□□□□ -1.59
PCDH9-201ENST00000377861 USP6NLQ92738 828 aa5.13□□□□□ -1.59
PCDH9-201ENST00000377861 FOPNLQ96NB1 174 aa5.13□□□□□ -1.59
PCDH9-201ENST00000377861 HDAC6Q9UBN7 1215 aa5.13□□□□□ -1.59
PCDH9-201ENST00000377861 MOCS3O95396 460 aa5.13□□□□□ -1.59
PCDH9-201ENST00000377861 MRNIPQ6NTE8 343 aa5.13□□□□□ -1.59
PCDH9-201ENST00000377861 SH2D3CQ8N5H7 860 aa5.13□□□□□ -1.59
PCDH9-201ENST00000377861 TNFRSF25Q93038 417 aa5.13□□□□□ -1.59
PCDH9-201ENST00000377861 ARHGAP23Q9P227 1491 aa5.13□□□□□ -1.59
PCDH9-201ENST00000377861 GRXCR2A6NFK2 248 aa5.13□□□□□ -1.59
PCDH9-201ENST00000377861 S100A1P23297 94 aa5.13□□□□□ -1.59
PCDH9-201ENST00000377861 MAPK1P28482 360 aa5.13□□□□□ -1.59
PCDH9-201ENST00000377861 PMLP29590 882 aa5.13□□□□□ -1.59
PCDH9-201ENST00000377861 CYP2J2P51589 502 aa5.13□□□□□ -1.59
PCDH9-201ENST00000377861 PARD3BQ8TEW8 1205 aa5.13□□□□□ -1.59
PCDH9-201ENST00000377861 MFSD14AQ96MC6 490 aa5.13□□□□□ -1.59
PCDH9-201ENST00000377861 C15orf41Q9Y2V0 281 aa5.13□□□□□ -1.59
PCDH9-201ENST00000377861 PIGBOS1A0A0B4J2F0 54 aa5.13□□□□□ -1.59
PCDH9-201ENST00000377861 GSAPA4D1B5 854 aa5.13□□□□□ -1.59
PCDH9-201ENST00000377861 APOL1O14791 398 aa5.13□□□□□ -1.59
PCDH9-201ENST00000377861 CHN1P15882 459 aa5.13□□□□□ -1.59
PCDH9-201ENST00000377861 PTPN5P54829 565 aa5.13□□□□□ -1.59
PCDH9-201ENST00000377861 BASP1P80723 227 aaKnown RBP5.13□□□□□ -1.59
PCDH9-201ENST00000377861 ZNF420Q8TAQ5 688 aaPredicted RBP5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms