RNA–Protein interactions for RNA: ENST00000377298.8

CLSTN1-202, Transcript of calsyntenin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN1, Length 5,221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-202ENST00000377298 BRSK2Q8IWQ3 736 aa18.62■□□□□ 0.57
CLSTN1-202ENST00000377298 ABRAQ8N0Z2 381 aa18.62■□□□□ 0.57
CLSTN1-202ENST00000377298 TBC1D19Q8N5T2 526 aa18.62■□□□□ 0.57
CLSTN1-202ENST00000377298 FAM172AQ8WUF8 416 aa18.62■□□□□ 0.57
CLSTN1-202ENST00000377298 HMX1Q9NP08 348 aaPredicted RBP18.62■□□□□ 0.57
CLSTN1-202ENST00000377298 ADCYAP1R1P41586 468 aa18.62■□□□□ 0.57
CLSTN1-202ENST00000377298 RAP1GAPP47736 663 aa18.62■□□□□ 0.57
CLSTN1-202ENST00000377298 RGS4P49798 205 aa18.62■□□□□ 0.57
CLSTN1-202ENST00000377298 GEMP55040 296 aa18.62■□□□□ 0.57
CLSTN1-202ENST00000377298 PTK7Q13308 1070 aa18.62■□□□□ 0.57
CLSTN1-202ENST00000377298 TFDP3Q5H9I0 405 aa18.62■□□□□ 0.57
CLSTN1-202ENST00000377298 LATS2Q9NRM7 1088 aa18.62■□□□□ 0.57
CLSTN1-202ENST00000377298 CCDC78A2IDD5 438 aa18.62■□□□□ 0.57
CLSTN1-202ENST00000377298 ETFBP38117 255 aa18.62■□□□□ 0.57
CLSTN1-202ENST00000377298 GCNT1Q02742 428 aa18.62■□□□□ 0.57
CLSTN1-202ENST00000377298 KYNUQ16719 465 aa18.62■□□□□ 0.57
CLSTN1-202ENST00000377298 AGBL2Q5U5Z8 902 aa18.62■□□□□ 0.57
CLSTN1-202ENST00000377298 RASIP1Q5U651 963 aa18.62■□□□□ 0.57
CLSTN1-202ENST00000377298 MIB1Q86YT6 1006 aa18.62■□□□□ 0.57
CLSTN1-202ENST00000377298 FUCA2Q9BTY2 467 aa18.62■□□□□ 0.57
CLSTN1-202ENST00000377298 TRIM45Q9H8W5 580 aaPredicted RBP18.62■□□□□ 0.57
CLSTN1-202ENST00000377298 PROSCO94903 275 aa18.61■□□□□ 0.57
CLSTN1-202ENST00000377298 UBA1P22314 1058 aaKnown RBP18.61■□□□□ 0.57
CLSTN1-202ENST00000377298 SLC12A3P55017 1021 aa18.61■□□□□ 0.57
CLSTN1-202ENST00000377298 CLEC16AQ2KHT3 1053 aa18.61■□□□□ 0.57
CLSTN1-202ENST00000377298 KCNMB3Q9NPA1 279 aa18.61■□□□□ 0.57
CLSTN1-202ENST00000377298 LGALS2P05162 132 aa18.61■□□□□ 0.57
CLSTN1-202ENST00000377298 C1QBPQ07021 282 aaKnown RBP18.61■□□□□ 0.57
CLSTN1-202ENST00000377298 GRAMD1BQ3KR37 738 aa18.61■□□□□ 0.57
CLSTN1-202ENST00000377298 ZNF571Q7Z3V5 609 aaPredicted RBP18.61■□□□□ 0.57
CLSTN1-202ENST00000377298 SLC47A2Q86VL8 602 aa18.61■□□□□ 0.57
CLSTN1-202ENST00000377298 PCDHGB4Q9UN71 923 aa18.61■□□□□ 0.57
CLSTN1-202ENST00000377298 FZD1Q9UP38 647 aa18.61■□□□□ 0.57
CLSTN1-202ENST00000377298 TFR2Q9UP52 801 aa18.61■□□□□ 0.57
CLSTN1-202ENST00000377298 ZMYM2Q9UBW7 1377 aa18.61■□□□□ 0.57
CLSTN1-202ENST00000377298 HMOX2P30519 316 aa18.61■□□□□ 0.57
CLSTN1-202ENST00000377298 HIPK4Q8NE63 616 aa18.61■□□□□ 0.57
CLSTN1-202ENST00000377298 STAMBPL1Q96FJ0 436 aa18.61■□□□□ 0.57
CLSTN1-202ENST00000377298 TINF2Q9BSI4 451 aa18.61■□□□□ 0.57
CLSTN1-202ENST00000377298 VPS9D1Q9Y2B5 631 aa18.61■□□□□ 0.57
CLSTN1-202ENST00000377298 PKP3Q9Y446 797 aa18.61■□□□□ 0.57
CLSTN1-202ENST00000377298 PMS1P54277 932 aaKnown RBP18.61■□□□□ 0.57
CLSTN1-202ENST00000377298 PHEXP78562 749 aa18.61■□□□□ 0.57
CLSTN1-202ENST00000377298 MAPK7Q13164 816 aa18.61■□□□□ 0.57
CLSTN1-202ENST00000377298 PTK2BQ14289 1009 aa18.61■□□□□ 0.57
CLSTN1-202ENST00000377298 MDH1BQ5I0G3 518 aa18.61■□□□□ 0.57
CLSTN1-202ENST00000377298 TIGD7Q6NT04 549 aaPredicted RBP18.61■□□□□ 0.57
CLSTN1-202ENST00000377298 ILDR1Q86SU0 546 aaPredicted RBP18.61■□□□□ 0.57
CLSTN1-202ENST00000377298 SLC4A7Q9Y6M7 1214 aa18.61■□□□□ 0.57
CLSTN1-202ENST00000377298 CASTOR2A6NHX0 329 aa18.6■□□□□ 0.57
CLSTN1-202ENST00000377298 CHUKO15111 745 aa18.6■□□□□ 0.57
CLSTN1-202ENST00000377298 MBL2P11226 248 aaPredicted RBP18.6■□□□□ 0.57
CLSTN1-202ENST00000377298 CARSP49589 748 aaKnown RBP18.6■□□□□ 0.57
CLSTN1-202ENST00000377298 PTRHD1Q6GMV3 140 aaKnown RBP18.6■□□□□ 0.57
CLSTN1-202ENST00000377298 TRAPPC12Q8WVT3 735 aa18.6■□□□□ 0.57
CLSTN1-202ENST00000377298 ZNF669Q96BR6 464 aaPredicted RBP18.6■□□□□ 0.57
CLSTN1-202ENST00000377298 ACSF2Q96CM8 615 aaPredicted RBP18.6■□□□□ 0.57
CLSTN1-202ENST00000377298 SYT15Q9BQS2 421 aa18.6■□□□□ 0.57
CLSTN1-202ENST00000377298 DPP7Q9UHL4 492 aa18.6■□□□□ 0.57
CLSTN1-202ENST00000377298 TRPV2Q9Y5S1 764 aa18.6■□□□□ 0.57
CLSTN1-202ENST00000377298 CYP3A7-CYP3A51PA0A087WV96 503 aa18.6■□□□□ 0.57
CLSTN1-202ENST00000377298 FAM47DPA6NHR8 397 aa18.6■□□□□ 0.57
CLSTN1-202ENST00000377298 PPP1R37O75864 691 aa18.6■□□□□ 0.57
CLSTN1-202ENST00000377298 CYP3A7P24462 503 aa18.6■□□□□ 0.57
CLSTN1-202ENST00000377298 FKBP1BP68106 108 aa18.6■□□□□ 0.57
CLSTN1-202ENST00000377298 STX3Q13277 289 aa18.6■□□□□ 0.57
CLSTN1-202ENST00000377298 ENTPD7Q9NQZ7 604 aa18.6■□□□□ 0.57
CLSTN1-202ENST00000377298 SLC15A5A6NIM6 579 aa18.6■□□□□ 0.57
CLSTN1-202ENST00000377298 MAP3K7CLP57077 242 aa18.6■□□□□ 0.57
CLSTN1-202ENST00000377298 CELF3Q5SZQ8 465 aaKnown RBP18.6■□□□□ 0.57
CLSTN1-202ENST00000377298 OVOS1Q6IE37 1185 aa18.6■□□□□ 0.57
CLSTN1-202ENST00000377298 CASS4Q9NQ75 786 aa18.6■□□□□ 0.57
CLSTN1-202ENST00000377298 DDX43Q9NXZ2 648 aaKnown RBP18.6■□□□□ 0.57
CLSTN1-202ENST00000377298 MRC1P22897 1456 aa18.6■□□□□ 0.57
CLSTN1-202ENST00000377298 PSMD10O75832 226 aa18.6■□□□□ 0.57
CLSTN1-202ENST00000377298 CABYRO75952 493 aa18.6■□□□□ 0.57
CLSTN1-202ENST00000377298 CKMP06732 381 aa18.6■□□□□ 0.57
CLSTN1-202ENST00000377298 KPNA1P52294 538 aaPredicted RBP18.6■□□□□ 0.57
CLSTN1-202ENST00000377298 BTNL9Q6UXG8 535 aa18.6■□□□□ 0.57
CLSTN1-202ENST00000377298 CCNJLQ8IV13 435 aa18.6■□□□□ 0.57
CLSTN1-202ENST00000377298 TASP1Q9H6P5 420 aa18.6■□□□□ 0.57
CLSTN1-202ENST00000377298 SYNDIG1Q9H7V2 258 aa18.6■□□□□ 0.57
CLSTN1-202ENST00000377298 PCDHB12Q9Y5F1 795 aa18.6■□□□□ 0.57
CLSTN1-202ENST00000377298 GHRP10912 638 aa18.59■□□□□ 0.57
CLSTN1-202ENST00000377298 MDH1P40925 334 aaKnown RBP18.59■□□□□ 0.57
CLSTN1-202ENST00000377298 C1orf146Q5VVC0 180 aa18.59■□□□□ 0.57
CLSTN1-202ENST00000377298 SRLQ86TD4 932 aa18.59■□□□□ 0.57
CLSTN1-202ENST00000377298 SMYD3Q9H7B4 428 aa18.59■□□□□ 0.57
CLSTN1-202ENST00000377298 ARHGAP20Q9P2F6 1191 aa18.59■□□□□ 0.57
CLSTN1-202ENST00000377298 DOLKQ9UPQ8 538 aa18.59■□□□□ 0.57
CLSTN1-202ENST00000377298 AAR2Q9Y312 384 aaKnown RBP18.59■□□□□ 0.57
CLSTN1-202ENST00000377298 UBIAD1Q9Y5Z9 338 aa18.59■□□□□ 0.57
CLSTN1-202ENST00000377298 MEIS2O14770 477 aa18.59■□□□□ 0.57
CLSTN1-202ENST00000377298 EPHB3P54753 998 aa18.59■□□□□ 0.57
CLSTN1-202ENST00000377298 KCNA1Q09470 495 aa18.59■□□□□ 0.57
CLSTN1-202ENST00000377298 C2CD6Q53TS8 623 aa18.59■□□□□ 0.57
CLSTN1-202ENST00000377298 EXD1Q8NHP7 514 aa18.59■□□□□ 0.57
CLSTN1-202ENST00000377298 TATDN2Q93075 761 aa18.59■□□□□ 0.57
CLSTN1-202ENST00000377298 SLC35C1Q96A29 364 aa18.59■□□□□ 0.57
CLSTN1-202ENST00000377298 PORCNQ9H237 461 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms