RNA–Protein interactions for RNA: ENST00000377153.5

UBE4B-203, Transcript of ubiquitination factor E4B, humanhuman

TSL 3 BASIC

Gene UBE4B, Length 1,273 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-203ENST00000377153 UBE2TQ9NPD8 197 aaPredicted RBP15.4■□□□□ 0.06
UBE4B-203ENST00000377153 LIMA1Q9UHB6 759 aaKnown RBP15.4■□□□□ 0.06
UBE4B-203ENST00000377153 MAGED2Q9UNF1 606 aaPredicted RBP15.4■□□□□ 0.06
UBE4B-203ENST00000377153 PCDHB4Q9Y5E5 795 aa15.4■□□□□ 0.06
UBE4B-203ENST00000377153 ZNF638Q14966 1978 aaKnown RBP15.4■□□□□ 0.06
UBE4B-203ENST00000377153 NOTCH4Q99466 2003 aa15.39■□□□□ 0.05
UBE4B-203ENST00000377153 DOCK8Q8NF50 2099 aa15.39■□□□□ 0.05
UBE4B-203ENST00000377153 F8VP50 259 aa15.39■□□□□ 0.05
UBE4B-203ENST00000377153 AP1G2O75843 785 aa15.39■□□□□ 0.05
UBE4B-203ENST00000377153 KRT5P13647 590 aa15.39■□□□□ 0.05
UBE4B-203ENST00000377153 ZNF18P17022 549 aa15.39■□□□□ 0.05
UBE4B-203ENST00000377153 SLC9A1P19634 815 aa15.39■□□□□ 0.05
UBE4B-203ENST00000377153 PON1P27169 355 aa15.39■□□□□ 0.05
UBE4B-203ENST00000377153 CDC25CP30307 473 aa15.39■□□□□ 0.05
UBE4B-203ENST00000377153 NTHL1P78549 312 aa15.39■□□□□ 0.05
UBE4B-203ENST00000377153 NCAPHQ15003 741 aa15.39■□□□□ 0.05
UBE4B-203ENST00000377153 FILIP1LQ4L180 1135 aa15.39■□□□□ 0.05
UBE4B-203ENST00000377153 SGO2Q562F6 1265 aa15.39■□□□□ 0.05
UBE4B-203ENST00000377153 DENND5BQ6ZUT9 1274 aa15.39■□□□□ 0.05
UBE4B-203ENST00000377153 DNAJB7Q7Z6W7 309 aaPredicted RBP15.39■□□□□ 0.05
UBE4B-203ENST00000377153 DHX40Q8IX18 779 aaKnown RBP15.39■□□□□ 0.05
UBE4B-203ENST00000377153 GJD3Q8N144 294 aa15.39■□□□□ 0.05
UBE4B-203ENST00000377153 FEZF2Q8TBJ5 459 aa15.39■□□□□ 0.05
UBE4B-203ENST00000377153 GPR152Q8TDT2 470 aa15.39■□□□□ 0.05
UBE4B-203ENST00000377153 CYFIP2Q96F07 1278 aa15.39■□□□□ 0.05
UBE4B-203ENST00000377153 SPATA17Q96L03 361 aa15.39■□□□□ 0.05
UBE4B-203ENST00000377153 C8orf48Q96LL4 319 aa15.39■□□□□ 0.05
UBE4B-203ENST00000377153 PCMTD1Q96MG8 357 aaPredicted RBP15.39■□□□□ 0.05
UBE4B-203ENST00000377153 SLITRK6Q9H5Y7 841 aa15.39■□□□□ 0.05
UBE4B-203ENST00000377153 SLC38A8A6NNN8 435 aa15.38■□□□□ 0.05
UBE4B-203ENST00000377153 LGALS16A8MUM7 142 aa15.38■□□□□ 0.05
UBE4B-203ENST00000377153 C2CD4DB7Z1M9 353 aa15.38■□□□□ 0.05
UBE4B-203ENST00000377153 LOC730098B7Z3J9 87 aa15.38■□□□□ 0.05
UBE4B-203ENST00000377153 CLDN5O00501 218 aa15.38■□□□□ 0.05
UBE4B-203ENST00000377153 MICAL2O94851 1124 aa15.38■□□□□ 0.05
UBE4B-203ENST00000377153 PAEPP09466 180 aa15.38■□□□□ 0.05
UBE4B-203ENST00000377153 GPR15P49685 360 aa15.38■□□□□ 0.05
UBE4B-203ENST00000377153 COPB1P53618 953 aaKnown RBP15.38■□□□□ 0.05
UBE4B-203ENST00000377153 RAD23BP54727 409 aa15.38■□□□□ 0.05
UBE4B-203ENST00000377153 EPHA5P54756 1037 aa15.38■□□□□ 0.05
UBE4B-203ENST00000377153 PHLDB3Q6NSJ2 640 aa15.38■□□□□ 0.05
UBE4B-203ENST00000377153 FUKQ8N0W3 1084 aa15.38■□□□□ 0.05
UBE4B-203ENST00000377153 C12orf29Q8N999 325 aa15.38■□□□□ 0.05
UBE4B-203ENST00000377153 SLC4A11Q8NBS3 891 aa15.38■□□□□ 0.05
UBE4B-203ENST00000377153 RBBP8NLQ8NC74 664 aaPredicted RBP15.38■□□□□ 0.05
UBE4B-203ENST00000377153 WHAMMQ8TF30 809 aa15.38■□□□□ 0.05
UBE4B-203ENST00000377153 ING5Q8WYH8 240 aa15.38■□□□□ 0.05
UBE4B-203ENST00000377153 FGF13Q92913 245 aa15.38■□□□□ 0.05
UBE4B-203ENST00000377153 TRMT2BQ96GJ1 504 aaKnown RBP15.38■□□□□ 0.05
UBE4B-203ENST00000377153 NECAB3Q96P71 396 aaPredicted RBP15.38■□□□□ 0.05
UBE4B-203ENST00000377153 HNRNPABQ99729 332 aaKnown RBP15.38■□□□□ 0.05
UBE4B-203ENST00000377153 TSPY26PQ9H489 355 aa15.38■□□□□ 0.05
UBE4B-203ENST00000377153 HESX1Q9UBX0 185 aa15.38■□□□□ 0.05
UBE4B-203ENST00000377153 CDH7Q9ULB5 785 aa15.38■□□□□ 0.05
UBE4B-203ENST00000377153 KIAA1257Q9ULG3 409 aa15.38■□□□□ 0.05
UBE4B-203ENST00000377153 A0A1W2PRU2 124 aa15.37■□□□□ 0.05
UBE4B-203ENST00000377153 RTN3O95197 1032 aaPredicted RBP15.37■□□□□ 0.05
UBE4B-203ENST00000377153 NPR3P17342 541 aa15.37■□□□□ 0.05
UBE4B-203ENST00000377153 GABRR2P28476 465 aa15.37■□□□□ 0.05
UBE4B-203ENST00000377153 USP8P40818 1118 aa15.37■□□□□ 0.05
UBE4B-203ENST00000377153 UBXN1Q04323 297 aa15.37■□□□□ 0.05
UBE4B-203ENST00000377153 RAPGEF1Q13905 1077 aa15.37■□□□□ 0.05
UBE4B-203ENST00000377153 SLC5A9Q2M3M2 681 aa15.37■□□□□ 0.05
UBE4B-203ENST00000377153 PRSS36Q5K4E3 855 aa15.37■□□□□ 0.05
UBE4B-203ENST00000377153 SDHAF4Q5VUM1 108 aa15.37■□□□□ 0.05
UBE4B-203ENST00000377153 MTSS1LQ765P7 747 aa15.37■□□□□ 0.05
UBE4B-203ENST00000377153 LUZP1Q86V48 1076 aa15.37■□□□□ 0.05
UBE4B-203ENST00000377153 TMC8Q8IU68 726 aa15.37■□□□□ 0.05
UBE4B-203ENST00000377153 NPAS3Q8IXF0 933 aa15.37■□□□□ 0.05
UBE4B-203ENST00000377153 ZDHHC14Q8IZN3 488 aa15.37■□□□□ 0.05
UBE4B-203ENST00000377153 HS6ST3Q8IZP7 471 aa15.37■□□□□ 0.05
UBE4B-203ENST00000377153 UBR7Q8N806 425 aa15.37■□□□□ 0.05
UBE4B-203ENST00000377153 ITFG1Q8TB96 612 aa15.37■□□□□ 0.05
UBE4B-203ENST00000377153 LSM14BQ9BX40 385 aaKnown RBP15.37■□□□□ 0.05
UBE4B-203ENST00000377153 GPR88Q9GZN0 384 aa15.37■□□□□ 0.05
UBE4B-203ENST00000377153 ATXN3LQ9H3M9 355 aa15.37■□□□□ 0.05
UBE4B-203ENST00000377153 CBX8Q9HC52 389 aa15.37■□□□□ 0.05
UBE4B-203ENST00000377153 GDE1Q9NZC3 331 aa15.37■□□□□ 0.05
UBE4B-203ENST00000377153 ZMYM5Q9UJ78 669 aa15.37■□□□□ 0.05
UBE4B-203ENST00000377153 HELZP42694 1942 aaKnown RBP15.37■□□□□ 0.05
UBE4B-203ENST00000377153 C19orf67A6NJJ6 358 aa15.36■□□□□ 0.05
UBE4B-203ENST00000377153 NOL4O94818 638 aa15.36■□□□□ 0.05
UBE4B-203ENST00000377153 SERPINC1P01008 464 aa15.36■□□□□ 0.05
UBE4B-203ENST00000377153 VDRP11473 427 aa15.36■□□□□ 0.05
UBE4B-203ENST00000377153 LAMP2P13473 410 aa15.36■□□□□ 0.05
UBE4B-203ENST00000377153 ATP1A3P13637 1013 aa15.36■□□□□ 0.05
UBE4B-203ENST00000377153 CEBPBP17676 345 aa15.36■□□□□ 0.05
UBE4B-203ENST00000377153 MAP3K7CLP57077 242 aa15.36■□□□□ 0.05
UBE4B-203ENST00000377153 IFRD2Q12894 506 aaPredicted RBP15.36■□□□□ 0.05
UBE4B-203ENST00000377153 IQCB1Q15051 598 aa15.36■□□□□ 0.05
UBE4B-203ENST00000377153 STILQ15468 1287 aa15.36■□□□□ 0.05
UBE4B-203ENST00000377153 ARHGAP44Q17R89 818 aa15.36■□□□□ 0.05
UBE4B-203ENST00000377153 PPP1R26Q5T8A7 1209 aaPredicted RBP15.36■□□□□ 0.05
UBE4B-203ENST00000377153 SMYD5Q6GMV2 418 aa15.36■□□□□ 0.05
UBE4B-203ENST00000377153 LRSAM1Q6UWE0 723 aa15.36■□□□□ 0.05
UBE4B-203ENST00000377153 NUP93Q8N1F7 819 aa15.36■□□□□ 0.05
UBE4B-203ENST00000377153 STKLD1Q8NE28 680 aa15.36■□□□□ 0.05
UBE4B-203ENST00000377153 MRPS31Q92665 395 aaKnown RBP15.36■□□□□ 0.05
UBE4B-203ENST00000377153 KAT5Q92993 513 aa15.36■□□□□ 0.05
UBE4B-203ENST00000377153 KREMEN1Q96MU8 473 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms