RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 HLA-DPA1P20036 260 aa14.16□□□□□ -0.14
GPC6-201ENST00000377047 KLRC2P26717 231 aa14.16□□□□□ -0.14
GPC6-201ENST00000377047 PTGISQ16647 500 aa14.16□□□□□ -0.14
GPC6-201ENST00000377047 SLFN11Q7Z7L1 901 aa14.16□□□□□ -0.14
GPC6-201ENST00000377047 CIPCQ9C0C6 399 aa14.16□□□□□ -0.14
GPC6-201ENST00000377047 BRD8Q9H0E9 1235 aa14.16□□□□□ -0.14
GPC6-201ENST00000377047 YY1AP1Q9H869 796 aa14.16□□□□□ -0.14
GPC6-201ENST00000377047 NPHS2Q9NP85 383 aa14.16□□□□□ -0.14
GPC6-201ENST00000377047 NMRK2Q9NPI5 230 aa14.16□□□□□ -0.14
GPC6-201ENST00000377047 TIMM13Q9Y5L4 95 aaPredicted RBP14.16□□□□□ -0.14
GPC6-201ENST00000377047 SYNCRIPO60506 623 aaKnown RBP14.16□□□□□ -0.14
GPC6-201ENST00000377047 AGTP01019 485 aa14.16□□□□□ -0.14
GPC6-201ENST00000377047 ALDH5A1P51649 535 aaPredicted RBP14.16□□□□□ -0.14
GPC6-201ENST00000377047 HIST2H2ACQ16777 129 aaPredicted RBP14.16□□□□□ -0.14
GPC6-201ENST00000377047 HIST2H2AA3Q6FI13 130 aa14.16□□□□□ -0.14
GPC6-201ENST00000377047 WDR49Q8IV35 697 aa14.16□□□□□ -0.14
GPC6-201ENST00000377047 PPIL6Q8IXY8 311 aa14.16□□□□□ -0.14
GPC6-201ENST00000377047 C4orf19Q8IY42 314 aa14.16□□□□□ -0.14
GPC6-201ENST00000377047 CAPN10Q9HC96 672 aa14.16□□□□□ -0.14
GPC6-201ENST00000377047 PKD2L2Q9NZM6 624 aa14.16□□□□□ -0.14
GPC6-201ENST00000377047 DCCP43146 1447 aa14.16□□□□□ -0.14
GPC6-201ENST00000377047 LRRIQ1Q96JM4 1722 aa14.16□□□□□ -0.14
GPC6-201ENST00000377047 FOXN3O00409 490 aaPredicted RBP14.16□□□□□ -0.14
GPC6-201ENST00000377047 AKAP5P24588 427 aa14.16□□□□□ -0.14
GPC6-201ENST00000377047 USP50Q70EL3 339 aaPredicted RBP14.16□□□□□ -0.14
GPC6-201ENST00000377047 ITIH5Q86UX2 942 aa14.16□□□□□ -0.14
GPC6-201ENST00000377047 CELF4Q9BZC1 486 aaKnown RBP14.16□□□□□ -0.14
GPC6-201ENST00000377047 HMX1Q9NP08 348 aaPredicted RBP14.16□□□□□ -0.14
GPC6-201ENST00000377047 KCNQ5Q9NR82 932 aa14.16□□□□□ -0.14
GPC6-201ENST00000377047 TRMT6Q9UJA5 497 aaKnown RBP14.16□□□□□ -0.14
GPC6-201ENST00000377047 ANKRD65E5RJM6 399 aa14.16□□□□□ -0.14
GPC6-201ENST00000377047 STRNO43815 780 aa14.16□□□□□ -0.14
GPC6-201ENST00000377047 ACADMP11310 421 aa14.16□□□□□ -0.14
GPC6-201ENST00000377047 VSNL1P62760 191 aa14.16□□□□□ -0.14
GPC6-201ENST00000377047 BTG3Q14201 252 aaPredicted RBP14.16□□□□□ -0.14
GPC6-201ENST00000377047 ATP8B4Q8TF62 1192 aa14.16□□□□□ -0.14
GPC6-201ENST00000377047 RUBCNQ92622 972 aa14.16□□□□□ -0.14
GPC6-201ENST00000377047 EIF2AQ9BY44 585 aaKnown RBP14.16□□□□□ -0.14
GPC6-201ENST00000377047 GPATCH2LQ9NWQ4 482 aa14.16□□□□□ -0.14
GPC6-201ENST00000377047 DDX43Q9NXZ2 648 aaKnown RBP14.16□□□□□ -0.14
GPC6-201ENST00000377047 WWOXQ9NZC7 414 aa14.16□□□□□ -0.14
GPC6-201ENST00000377047 NOP53Q9NZM5 478 aaKnown RBP14.16□□□□□ -0.14
GPC6-201ENST00000377047 CLASP2O75122 1294 aaKnown RBP14.16□□□□□ -0.14
GPC6-201ENST00000377047 RHOCP08134 193 aa14.16□□□□□ -0.14
GPC6-201ENST00000377047 UGT3A1Q6NUS8 523 aa14.16□□□□□ -0.14
GPC6-201ENST00000377047 TRIM65Q6PJ69 517 aa14.16□□□□□ -0.14
GPC6-201ENST00000377047 KCNV2Q8TDN2 545 aa14.16□□□□□ -0.14
GPC6-201ENST00000377047 FAM172AQ8WUF8 416 aa14.16□□□□□ -0.14
GPC6-201ENST00000377047 KANSL3Q9P2N6 904 aa14.16□□□□□ -0.14
GPC6-201ENST00000377047 CDYLQ9Y232 598 aa14.16□□□□□ -0.14
GPC6-201ENST00000377047 RAD51CO43502 376 aa14.15□□□□□ -0.14
GPC6-201ENST00000377047 RAD9BQ6WBX8 426 aa14.15□□□□□ -0.14
GPC6-201ENST00000377047 SYN2Q92777 582 aaPredicted RBP14.15□□□□□ -0.14
GPC6-201ENST00000377047 KLF6Q99612 283 aaPredicted RBP14.15□□□□□ -0.14
GPC6-201ENST00000377047 FAM32AQ9Y421 112 aaKnown RBP14.15□□□□□ -0.14
GPC6-201ENST00000377047 MST1RQ04912 1400 aa14.15□□□□□ -0.14
GPC6-201ENST00000377047 SPAG6O75602 509 aa14.15□□□□□ -0.14
GPC6-201ENST00000377047 SRP72O76094 671 aaKnown RBP14.15□□□□□ -0.14
GPC6-201ENST00000377047 SOX11P35716 441 aa14.15□□□□□ -0.14
GPC6-201ENST00000377047 FDFT1P37268 417 aa14.15□□□□□ -0.14
GPC6-201ENST00000377047 MYL6P60660 151 aa14.15□□□□□ -0.14
GPC6-201ENST00000377047 CYP24A1Q07973 514 aa14.15□□□□□ -0.14
GPC6-201ENST00000377047 KCNT1Q5JUK3 1230 aa14.15□□□□□ -0.14
GPC6-201ENST00000377047 AMHP03971 560 aa14.15□□□□□ -0.14
GPC6-201ENST00000377047 PLA2G4AP47712 749 aa14.15□□□□□ -0.14
GPC6-201ENST00000377047 POLE2P56282 527 aa14.15□□□□□ -0.14
GPC6-201ENST00000377047 GUCY1A3Q02108 690 aa14.15□□□□□ -0.14
GPC6-201ENST00000377047 C6orf203Q9P0P8 240 aaPredicted RBP14.15□□□□□ -0.14
GPC6-201ENST00000377047 DPP7Q9UHL4 492 aa14.15□□□□□ -0.14
GPC6-201ENST00000377047 CDH16O75309 829 aa14.15□□□□□ -0.14
GPC6-201ENST00000377047 H2AFYO75367 372 aaKnown RBP14.15□□□□□ -0.14
GPC6-201ENST00000377047 SNRPAP09012 282 aaKnown RBP14.15□□□□□ -0.14
GPC6-201ENST00000377047 POU4F1Q01851 419 aa14.15□□□□□ -0.14
GPC6-201ENST00000377047 TIGD7Q6NT04 549 aaPredicted RBP14.15□□□□□ -0.14
GPC6-201ENST00000377047 TC2NQ8N9U0 490 aa14.15□□□□□ -0.14
GPC6-201ENST00000377047 STAMBPL1Q96FJ0 436 aa14.15□□□□□ -0.14
GPC6-201ENST00000377047 HPS4Q9NQG7 708 aa14.15□□□□□ -0.14
GPC6-201ENST00000377047 F9P00740 461 aa14.15□□□□□ -0.14
GPC6-201ENST00000377047 ERVK-9P63128 1117 aa14.15□□□□□ -0.14
GPC6-201ENST00000377047 ERVK-24P63145 666 aa14.15□□□□□ -0.14
GPC6-201ENST00000377047 TTLL9Q3SXZ7 439 aa14.15□□□□□ -0.14
GPC6-201ENST00000377047 TMEM176AQ96HP8 235 aa14.15□□□□□ -0.14
GPC6-201ENST00000377047 RNF208Q9H0X6 261 aa14.15□□□□□ -0.14
GPC6-201ENST00000377047 GTPBP10A4D1E9 387 aaKnown RBP14.14□□□□□ -0.15
GPC6-201ENST00000377047 PSTPIP1O43586 416 aa14.14□□□□□ -0.15
GPC6-201ENST00000377047 PTPN7P35236 360 aa14.14□□□□□ -0.15
GPC6-201ENST00000377047 CTCFP49711 727 aaPredicted RBP14.14□□□□□ -0.15
GPC6-201ENST00000377047 RAB27AP51159 221 aa14.14□□□□□ -0.15
GPC6-201ENST00000377047 RAP1GDS1P52306 607 aa14.14□□□□□ -0.15
GPC6-201ENST00000377047 FBXO47Q5MNV8 452 aa14.14□□□□□ -0.15
GPC6-201ENST00000377047 MROH9Q5TGP6 573 aa14.14□□□□□ -0.15
GPC6-201ENST00000377047 SPATA21Q7Z572 469 aa14.14□□□□□ -0.15
GPC6-201ENST00000377047 KAZALD1Q96I82 304 aa14.14□□□□□ -0.15
GPC6-201ENST00000377047 VPS33BQ9H267 617 aa14.14□□□□□ -0.15
GPC6-201ENST00000377047 VTA1Q9NP79 307 aa14.14□□□□□ -0.15
GPC6-201ENST00000377047 GGT7Q9UJ14 662 aa14.14□□□□□ -0.15
GPC6-201ENST00000377047 FBXO21O94952 628 aa14.14□□□□□ -0.15
GPC6-201ENST00000377047 TGFB3P10600 412 aa14.14□□□□□ -0.15
GPC6-201ENST00000377047 COILP38432 576 aaPredicted RBP14.14□□□□□ -0.15
GPC6-201ENST00000377047 HPCAP84074 193 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms