RNA–Protein interactions for RNA: ENST00000376751.7

RNF39-202, Transcript of ring finger protein 39, humanhuman

TSL 1 (best) BASIC

Gene RNF39, Length 1,970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-202ENST00000376751 NXF3Q9H4D5 531 aaKnown RBP22.81■■□□□ 1.24
RNF39-202ENST00000376751 CNOT10Q9H9A5 744 aaKnown RBP22.81■■□□□ 1.24
RNF39-202ENST00000376751 DRG1Q9Y295 367 aaKnown RBP22.81■■□□□ 1.24
RNF39-202ENST00000376751 DNALI1O14645 258 aaPredicted RBP22.8■■□□□ 1.24
RNF39-202ENST00000376751 DARSP14868 501 aaKnown RBP22.8■■□□□ 1.24
RNF39-202ENST00000376751 KDELR1P24390 212 aa22.8■■□□□ 1.24
RNF39-202ENST00000376751 ARSEP51690 589 aa22.8■■□□□ 1.24
RNF39-202ENST00000376751 MAP2K5Q13163 448 aa22.8■■□□□ 1.24
RNF39-202ENST00000376751 ZBTB6Q15916 424 aa22.8■■□□□ 1.24
RNF39-202ENST00000376751 FAM183BPQ6ZVS7 135 aa22.8■■□□□ 1.24
RNF39-202ENST00000376751 CROCCP2Q86T23 111 aa22.8■■□□□ 1.24
RNF39-202ENST00000376751 TLK2Q86UE8 772 aa22.8■■□□□ 1.24
RNF39-202ENST00000376751 PEBP4Q96S96 227 aa22.8■■□□□ 1.24
RNF39-202ENST00000376751 SELENOSQ9BQE4 189 aa22.8■■□□□ 1.24
RNF39-202ENST00000376751 ROPN1BQ9BZX4 212 aaPredicted RBP22.8■■□□□ 1.24
RNF39-202ENST00000376751 FAM107BQ9H098 131 aa22.8■■□□□ 1.24
RNF39-202ENST00000376751 ROPN1Q9HAT0 212 aaPredicted RBP22.8■■□□□ 1.24
RNF39-202ENST00000376751 PLEKHA5Q9HAU0 1116 aa22.8■■□□□ 1.24
RNF39-202ENST00000376751 DERAQ9Y315 318 aa22.8■■□□□ 1.24
RNF39-202ENST00000376751 NRCAMQ92823 1304 aa22.8■■□□□ 1.24
RNF39-202ENST00000376751 E5RJQ4 531 aa22.8■■□□□ 1.24
RNF39-202ENST00000376751 TULP2O00295 520 aa22.8■■□□□ 1.24
RNF39-202ENST00000376751 FAM107AO95990 144 aa22.8■■□□□ 1.24
RNF39-202ENST00000376751 ZNF865P0CJ78 1059 aaPredicted RBP22.8■■□□□ 1.24
RNF39-202ENST00000376751 MYO1EQ12965 1108 aa22.8■■□□□ 1.24
RNF39-202ENST00000376751 MFSD10Q14728 455 aa22.8■■□□□ 1.24
RNF39-202ENST00000376751 CCL14Q16627 93 aa22.8■■□□□ 1.24
RNF39-202ENST00000376751 HADHQ16836 314 aaKnown RBP22.8■■□□□ 1.24
RNF39-202ENST00000376751 CCDC38Q502W7 563 aa22.8■■□□□ 1.24
RNF39-202ENST00000376751 SH3PXD2AQ5TCZ1 1133 aa22.8■■□□□ 1.24
RNF39-202ENST00000376751 ZCCHC9Q8N567 271 aaKnown RBP22.8■■□□□ 1.24
RNF39-202ENST00000376751 TMEM40Q8WWA1 233 aa22.8■■□□□ 1.24
RNF39-202ENST00000376751 TMEM121Q9BTD3 319 aa22.8■■□□□ 1.24
RNF39-202ENST00000376751 C10orf88Q9H8K7 445 aa22.8■■□□□ 1.24
RNF39-202ENST00000376751 SNX9Q9Y5X1 595 aa22.8■■□□□ 1.24
RNF39-202ENST00000376751 SMIM35A0A1B0GVV1 85 aa22.79■■□□□ 1.24
RNF39-202ENST00000376751 MYO1CO00159 1063 aa22.79■■□□□ 1.24
RNF39-202ENST00000376751 IGF2BP3O00425 579 aaKnown RBP eCLIP22.79■■□□□ 1.24
RNF39-202ENST00000376751 TRUB2O95900 331 aaKnown RBP22.79■■□□□ 1.24
RNF39-202ENST00000376751 ITGAVP06756 1048 aa22.79■■□□□ 1.24
RNF39-202ENST00000376751 RGS7P49802 495 aa22.79■■□□□ 1.24
RNF39-202ENST00000376751 GPS1Q13098 491 aa22.79■■□□□ 1.24
RNF39-202ENST00000376751 BBS12Q6ZW61 710 aa22.79■■□□□ 1.24
RNF39-202ENST00000376751 IPO4Q8TEX9 1081 aaKnown RBP22.79■■□□□ 1.24
RNF39-202ENST00000376751 GMNCA6NCL1 334 aa22.78■■□□□ 1.24
RNF39-202ENST00000376751 CST8O60676 142 aa22.78■■□□□ 1.24
RNF39-202ENST00000376751 RECQL4O94761 1208 aa22.78■■□□□ 1.24
RNF39-202ENST00000376751 CHN1P15882 459 aa22.78■■□□□ 1.24
RNF39-202ENST00000376751 ZNF200P98182 395 aaPredicted RBP22.78■■□□□ 1.24
RNF39-202ENST00000376751 OTUD4Q01804 1114 aaKnown RBP22.78■■□□□ 1.24
RNF39-202ENST00000376751 PPP1R26Q5T8A7 1209 aaPredicted RBP22.78■■□□□ 1.24
RNF39-202ENST00000376751 CST9Q5W186 159 aa22.78■■□□□ 1.24
RNF39-202ENST00000376751 NOTUMQ6P988 496 aa22.78■■□□□ 1.24
RNF39-202ENST00000376751 CYP4V2Q6ZWL3 525 aaPredicted RBP22.78■■□□□ 1.24
RNF39-202ENST00000376751 ACOT1Q86TX2 421 aa22.78■■□□□ 1.24
RNF39-202ENST00000376751 ACTL9Q8TC94 416 aa22.78■■□□□ 1.24
RNF39-202ENST00000376751 DNAJB3Q8WWF6 145 aa22.78■■□□□ 1.24
RNF39-202ENST00000376751 C9orf72Q96LT7 481 aa22.78■■□□□ 1.24
RNF39-202ENST00000376751 APOL6Q9BWW8 343 aa22.78■■□□□ 1.24
RNF39-202ENST00000376751 FAM124BQ9H5Z6 455 aaPredicted RBP22.78■■□□□ 1.24
RNF39-202ENST00000376751 SLC5A4Q9NY91 659 aa22.78■■□□□ 1.24
RNF39-202ENST00000376751 CTNNAL1Q9UBT7 734 aa22.78■■□□□ 1.24
RNF39-202ENST00000376751 EFR3BQ9Y2G0 817 aa22.78■■□□□ 1.24
RNF39-202ENST00000376751 ZNF143P52747 638 aaPredicted RBP22.78■■□□□ 1.24
RNF39-202ENST00000376751 ADAM17P78536 824 aa22.78■■□□□ 1.24
RNF39-202ENST00000376751 OR6B2Q6IFH4 312 aa22.78■■□□□ 1.24
RNF39-202ENST00000376751 CHADLQ6NUI6 762 aa22.78■■□□□ 1.24
RNF39-202ENST00000376751 ALKAL1Q6UXT8 129 aa22.78■■□□□ 1.24
RNF39-202ENST00000376751 TTC30AQ86WT1 665 aa22.78■■□□□ 1.24
RNF39-202ENST00000376751 RELL1Q8IUW5 271 aa22.78■■□□□ 1.24
RNF39-202ENST00000376751 TTC39CQ8N584 583 aa22.78■■□□□ 1.24
RNF39-202ENST00000376751 CCHCR1Q8TD31 782 aa22.78■■□□□ 1.24
RNF39-202ENST00000376751 HSPH1Q92598 858 aa22.78■■□□□ 1.24
RNF39-202ENST00000376751 XPO6Q96QU8 1125 aaKnown RBP22.78■■□□□ 1.24
RNF39-202ENST00000376751 LPIN3Q9BQK8 851 aa22.78■■□□□ 1.24
RNF39-202ENST00000376751 RRAGCQ9HB90 399 aa22.78■■□□□ 1.24
RNF39-202ENST00000376751 FAM49BQ9NUQ9 324 aa22.78■■□□□ 1.24
RNF39-202ENST00000376751 KIAA1257Q9ULG3 409 aa22.78■■□□□ 1.24
RNF39-202ENST00000376751 C2CD4BA6NLJ0 364 aa22.77■■□□□ 1.24
RNF39-202ENST00000376751 HCRTO43612 131 aa22.77■■□□□ 1.24
RNF39-202ENST00000376751 GRAP2O75791 330 aa22.77■■□□□ 1.24
RNF39-202ENST00000376751 AKAP5P24588 427 aa22.77■■□□□ 1.24
RNF39-202ENST00000376751 PSEN2P49810 448 aa22.77■■□□□ 1.24
RNF39-202ENST00000376751 QPCTQ16769 361 aa22.77■■□□□ 1.24
RNF39-202ENST00000376751 C15orf59Q2T9L4 293 aaPredicted RBP22.77■■□□□ 1.24
RNF39-202ENST00000376751 PKDCCQ504Y2 493 aa22.77■■□□□ 1.24
RNF39-202ENST00000376751 ERMARDQ5T6L9 678 aa22.77■■□□□ 1.24
RNF39-202ENST00000376751 CMASQ8NFW8 434 aaPredicted RBP22.77■■□□□ 1.24
RNF39-202ENST00000376751 ATXN2LQ8WWM7 1075 aaKnown RBP22.77■■□□□ 1.24
RNF39-202ENST00000376751 RXFP2Q8WXD0 754 aa22.77■■□□□ 1.24
RNF39-202ENST00000376751 RBM15Q96T37 977 aaKnown RBP eCLIP22.77■■□□□ 1.24
RNF39-202ENST00000376751 CNTN3Q9P232 1028 aa22.77■■□□□ 1.24
RNF39-202ENST00000376751 USP18Q9UMW8 372 aa22.77■■□□□ 1.24
RNF39-202ENST00000376751 FAM169AQ9Y6X4 670 aa22.77■■□□□ 1.24
RNF39-202ENST00000376751 SGK1O00141 431 aa22.76■■□□□ 1.23
RNF39-202ENST00000376751 TRIM66O15016 1216 aa22.76■■□□□ 1.23
RNF39-202ENST00000376751 GPD1P21695 349 aa22.76■■□□□ 1.23
RNF39-202ENST00000376751 GDF10P55107 478 aa22.76■■□□□ 1.23
RNF39-202ENST00000376751 PLCB3Q01970 1234 aa22.76■■□□□ 1.23
RNF39-202ENST00000376751 PMF1Q6P1K2 205 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms