RNA–Protein interactions for RNA: ENST00000376228.9

HLA-C-201, Transcript of major histocompatibility complex, class I, C, humanhuman

APPRIS P2 BASIC

Gene HLA-C, Length 1,536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-201ENST00000376228 MRPL47Q9HD33 250 aaKnown RBP22.38■■□□□ 1.17
HLA-C-201ENST00000376228 UBN1Q9NPG3 1134 aa22.38■■□□□ 1.17
HLA-C-201ENST00000376228 TBC1D13Q9NVG8 400 aa22.38■■□□□ 1.17
HLA-C-201ENST00000376228 SNX9Q9Y5X1 595 aa22.38■■□□□ 1.17
HLA-C-201ENST00000376228 NT5C1B-RDH14C9J2C7 533 aa22.37■■□□□ 1.17
HLA-C-201ENST00000376228 RRM1P23921 792 aa22.37■■□□□ 1.17
HLA-C-201ENST00000376228 IRS1P35568 1242 aa22.37■■□□□ 1.17
HLA-C-201ENST00000376228 NDST1P52848 882 aa22.37■■□□□ 1.17
HLA-C-201ENST00000376228 SOX4Q06945 474 aaPredicted RBP22.37■■□□□ 1.17
HLA-C-201ENST00000376228 TIGD5Q53EQ6 642 aa22.37■■□□□ 1.17
HLA-C-201ENST00000376228 PASD1Q8IV76 773 aa22.37■■□□□ 1.17
HLA-C-201ENST00000376228 ZNF558Q96NG5 402 aa22.37■■□□□ 1.17
HLA-C-201ENST00000376228 SELENOOQ9BVL4 669 aa22.37■■□□□ 1.17
HLA-C-201ENST00000376228 LMAN2LQ9H0V9 348 aa22.37■■□□□ 1.17
HLA-C-201ENST00000376228 GOLPH3Q9H4A6 298 aa22.37■■□□□ 1.17
HLA-C-201ENST00000376228 NSUN3Q9H649 340 aaKnown RBP22.37■■□□□ 1.17
HLA-C-201ENST00000376228 NOL12Q9UGY1 213 aaKnown RBP eCLIP22.37■■□□□ 1.173e-12■■□□□ 11.4
HLA-C-201ENST00000376228 LCMT1Q9UIC8 334 aa22.37■■□□□ 1.17
HLA-C-201ENST00000376228 PACSIN2Q9UNF0 486 aaPredicted RBP22.37■■□□□ 1.17
HLA-C-201ENST00000376228 SCINQ9Y6U3 715 aa22.37■■□□□ 1.17
HLA-C-201ENST00000376228 V9GYY5 206 aaPredicted RBP22.37■■□□□ 1.17
HLA-C-201ENST00000376228 KPNA7A9QM74 516 aa22.36■■□□□ 1.17
HLA-C-201ENST00000376228 ATMINO43313 823 aaPredicted RBP22.36■■□□□ 1.17
HLA-C-201ENST00000376228 CD19P15391 556 aa22.36■■□□□ 1.17
HLA-C-201ENST00000376228 SGO2Q562F6 1265 aa22.36■■□□□ 1.17
HLA-C-201ENST00000376228 TEX35Q5T0J7 233 aa22.36■■□□□ 1.17
HLA-C-201ENST00000376228 RASGEF1CQ8N431 466 aa22.36■■□□□ 1.17
HLA-C-201ENST00000376228 ACTRT1Q8TDG2 376 aa22.36■■□□□ 1.17
HLA-C-201ENST00000376228 HMGXB4Q9UGU5 601 aa22.36■■□□□ 1.17
HLA-C-201ENST00000376228 TTC7AQ9ULT0 858 aaPredicted RBP22.36■■□□□ 1.17
HLA-C-201ENST00000376228 WDR3Q9UNX4 943 aaKnown RBP eCLIP22.36■■□□□ 1.17
HLA-C-201ENST00000376228 O00370 1275 aa22.36■■□□□ 1.17
HLA-C-201ENST00000376228 INPPL1O15357 1258 aa22.36■■□□□ 1.17
HLA-C-201ENST00000376228 DDX3YO15523 660 aaKnown RBP22.36■■□□□ 1.17
HLA-C-201ENST00000376228 B4GALT3O60512 393 aa22.36■■□□□ 1.17
HLA-C-201ENST00000376228 POMCP01189 267 aa22.36■■□□□ 1.17
HLA-C-201ENST00000376228 THP07101 528 aa22.36■■□□□ 1.17
HLA-C-201ENST00000376228 CXCR5P32302 372 aa22.36■■□□□ 1.17
HLA-C-201ENST00000376228 MLH1P40692 756 aa22.36■■□□□ 1.17
HLA-C-201ENST00000376228 GSCP56915 257 aaPredicted RBP22.36■■□□□ 1.17
HLA-C-201ENST00000376228 BCAR1P56945 870 aa22.36■■□□□ 1.17
HLA-C-201ENST00000376228 RNASELQ05823 741 aaKnown RBP22.36■■□□□ 1.17
HLA-C-201ENST00000376228 SOWAHAQ2M3V2 549 aa22.36■■□□□ 1.17
HLA-C-201ENST00000376228 CCDC181Q5TID7 509 aa22.36■■□□□ 1.17
HLA-C-201ENST00000376228 MMGT1Q8N4V1 131 aa22.36■■□□□ 1.17
HLA-C-201ENST00000376228 C11orf70Q9BRQ4 267 aa22.36■■□□□ 1.17
HLA-C-201ENST00000376228 DNAI2Q9GZS0 605 aa22.36■■□□□ 1.17
HLA-C-201ENST00000376228 CARD9Q9H257 536 aa22.36■■□□□ 1.17
HLA-C-201ENST00000376228 NRDE2Q9H7Z3 1164 aa22.36■■□□□ 1.17
HLA-C-201ENST00000376228 DNAJB4Q9UDY4 337 aa22.36■■□□□ 1.17
HLA-C-201ENST00000376228 TCF20Q9UGU0 1960 aaKnown RBP22.35■■□□□ 1.17
HLA-C-201ENST00000376228 TCRBV5S1A1TA0A578 114 aa22.35■■□□□ 1.17
HLA-C-201ENST00000376228 KCNK3O14649 394 aa22.35■■□□□ 1.17
HLA-C-201ENST00000376228 TUBBP07437 444 aa22.35■■□□□ 1.17
HLA-C-201ENST00000376228 SLC1A1P43005 524 aa22.35■■□□□ 1.17
HLA-C-201ENST00000376228 LCLAT1Q6UWP7 414 aa22.35■■□□□ 1.17
HLA-C-201ENST00000376228 MMS22LQ6ZRQ5 1243 aa22.35■■□□□ 1.17
HLA-C-201ENST00000376228 ZNF280BQ86YH2 543 aa22.35■■□□□ 1.17
HLA-C-201ENST00000376228 TOP6BLQ8N6T0 577 aa22.35■■□□□ 1.17
HLA-C-201ENST00000376228 MSANTD4Q8NCY6 345 aa22.35■■□□□ 1.17
HLA-C-201ENST00000376228 C1orf131Q8NDD1 294 aaKnown RBP22.35■■□□□ 1.17
HLA-C-201ENST00000376228 URGCPQ8TCY9 931 aa22.35■■□□□ 1.17
HLA-C-201ENST00000376228 CD101Q93033 1021 aa22.35■■□□□ 1.17
HLA-C-201ENST00000376228 ZFP42Q96MM3 310 aa22.35■■□□□ 1.17
HLA-C-201ENST00000376228 GAD1Q99259 594 aa22.35■■□□□ 1.17
HLA-C-201ENST00000376228 MRPL45Q9BRJ2 306 aaKnown RBP22.35■■□□□ 1.17
HLA-C-201ENST00000376228 PARVAQ9NVD7 372 aa22.35■■□□□ 1.17
HLA-C-201ENST00000376228 STRIP2Q9ULQ0 834 aa22.35■■□□□ 1.17
HLA-C-201ENST00000376228 BRWD1Q9NSI6 2320 aa22.35■■□□□ 1.17
HLA-C-201ENST00000376228 ARL5CA6NH57 179 aa22.34■■□□□ 1.17
HLA-C-201ENST00000376228 PAX3P23760 479 aa22.34■■□□□ 1.17
HLA-C-201ENST00000376228 CTNNA2P26232 953 aa22.34■■□□□ 1.17
HLA-C-201ENST00000376228 RPL9P32969 192 aaKnown RBP22.34■■□□□ 1.17
HLA-C-201ENST00000376228 LILRA4P59901 499 aa22.34■■□□□ 1.17
HLA-C-201ENST00000376228 MAMLD1Q13495 774 aa22.34■■□□□ 1.17
HLA-C-201ENST00000376228 MESDQ14696 234 aa22.34■■□□□ 1.17
HLA-C-201ENST00000376228 DENND1BQ6P3S1 775 aa22.34■■□□□ 1.17
HLA-C-201ENST00000376228 ADGRD2Q7Z7M1 963 aa22.34■■□□□ 1.17
HLA-C-201ENST00000376228 TMEM173Q86WV6 379 aaPredicted RBP22.34■■□□□ 1.17
HLA-C-201ENST00000376228 ERICH1Q86X53 443 aa22.34■■□□□ 1.17
HLA-C-201ENST00000376228 CRYBG2Q8N1P7 616 aa22.34■■□□□ 1.17
HLA-C-201ENST00000376228 SPATA4Q8NEY3 305 aa22.34■■□□□ 1.17
HLA-C-201ENST00000376228 HLA-CQ95604 372 aa22.34■■□□□ 1.17
HLA-C-201ENST00000376228 HEXIM2Q96MH2 286 aaKnown RBP22.34■■□□□ 1.17
HLA-C-201ENST00000376228 PSMB7Q99436 277 aa22.34■■□□□ 1.17
HLA-C-201ENST00000376228 SPTLC1O15269 473 aa22.33■■□□□ 1.17
HLA-C-201ENST00000376228 DDHD2O94830 711 aa22.33■■□□□ 1.17
HLA-C-201ENST00000376228 COMTP21964 271 aa22.33■■□□□ 1.17
HLA-C-201ENST00000376228 ALDH7A1P49419 539 aaKnown RBP22.33■■□□□ 1.17
HLA-C-201ENST00000376228 CLUL1Q15846 466 aa22.33■■□□□ 1.17
HLA-C-201ENST00000376228 SLC39A11Q8N1S5 342 aa22.33■■□□□ 1.17
HLA-C-201ENST00000376228 TLR9Q9NR96 1032 aa22.33■■□□□ 1.17
HLA-C-201ENST00000376228 SPG21Q9NZD8 308 aa22.33■■□□□ 1.17
HLA-C-201ENST00000376228 WDR35Q9P2L0 1181 aa22.33■■□□□ 1.17
HLA-C-201ENST00000376228 ANAPC7Q9UJX3 599 aa22.33■■□□□ 1.17
HLA-C-201ENST00000376228 CCDC66A2RUB6 948 aa22.32■■□□□ 1.16
HLA-C-201ENST00000376228 MYO1FO00160 1098 aa22.32■■□□□ 1.16
HLA-C-201ENST00000376228 MICAL2O94851 1124 aa22.32■■□□□ 1.16
HLA-C-201ENST00000376228 GPD2P43304 727 aa22.32■■□□□ 1.16
HLA-C-201ENST00000376228 GABRB2P47870 512 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms