RNA–Protein interactions for RNA: ENST00000376057.8

PDPN-202, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PDPN, Length 2,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-202ENST00000376057 V9GYY5 206 aaPredicted RBP11.72□□□□□ -0.53
PDPN-202ENST00000376057 GLI1P08151 1106 aa11.71□□□□□ -0.53
PDPN-202ENST00000376057 SLC8A3P57103 927 aa11.71□□□□□ -0.53
PDPN-202ENST00000376057 MAPRE1Q15691 268 aaKnown RBP11.71□□□□□ -0.53
PDPN-202ENST00000376057 PMF1Q6P1K2 205 aa11.71□□□□□ -0.53
PDPN-202ENST00000376057 SLC26A9Q7LBE3 791 aa11.71□□□□□ -0.53
PDPN-202ENST00000376057 NPAS4Q8IUM7 802 aa11.71□□□□□ -0.53
PDPN-202ENST00000376057 UBA3Q8TBC4 463 aa11.71□□□□□ -0.53
PDPN-202ENST00000376057 SEC14L1Q92503 715 aa11.71□□□□□ -0.53
PDPN-202ENST00000376057 SLCO2A1Q92959 643 aa11.71□□□□□ -0.53
PDPN-202ENST00000376057 MRPL9Q9BYD2 267 aaKnown RBP11.71□□□□□ -0.53
PDPN-202ENST00000376057 TRIM7Q9C029 511 aa11.71□□□□□ -0.53
PDPN-202ENST00000376057 PNPLA8Q9NP80 782 aa11.71□□□□□ -0.53
PDPN-202ENST00000376057 HOMER3Q9NSC5 361 aa11.71□□□□□ -0.53
PDPN-202ENST00000376057 DDX43Q9NXZ2 648 aaKnown RBP11.71□□□□□ -0.53
PDPN-202ENST00000376057 CHORDC1Q9UHD1 332 aaPredicted RBP11.71□□□□□ -0.53
PDPN-202ENST00000376057 GOLGA6L10A0A0M3HER8 536 aa11.71□□□□□ -0.54
PDPN-202ENST00000376057 CARNS1A5YM72 827 aa11.71□□□□□ -0.54
PDPN-202ENST00000376057 C2CD4BA6NLJ0 364 aa11.71□□□□□ -0.54
PDPN-202ENST00000376057 KRIT1O00522 736 aa11.71□□□□□ -0.54
PDPN-202ENST00000376057 FGGP02679 453 aa11.71□□□□□ -0.54
PDPN-202ENST00000376057 PYGMP11217 842 aa11.71□□□□□ -0.54
PDPN-202ENST00000376057 SSTR3P32745 418 aaPredicted RBP11.71□□□□□ -0.54
PDPN-202ENST00000376057 RFC1P35251 1148 aaPredicted RBP11.71□□□□□ -0.54
PDPN-202ENST00000376057 OGDHQ02218 1023 aa11.71□□□□□ -0.54
PDPN-202ENST00000376057 TAZQ16635 292 aa11.71□□□□□ -0.54
PDPN-202ENST00000376057 FBXO38Q6PIJ6 1188 aa11.71□□□□□ -0.54
PDPN-202ENST00000376057 PAQR9Q6ZVX9 377 aa11.71□□□□□ -0.54
PDPN-202ENST00000376057 SLC13A5Q86YT5 568 aaPredicted RBP11.71□□□□□ -0.54
PDPN-202ENST00000376057 FUKQ8N0W3 1084 aa11.71□□□□□ -0.54
PDPN-202ENST00000376057 RBM41Q96IZ5 413 aaKnown RBP11.71□□□□□ -0.54
PDPN-202ENST00000376057 CASD1Q96PB1 797 aa11.71□□□□□ -0.54
PDPN-202ENST00000376057 CNPY3Q9BT09 278 aa11.71□□□□□ -0.54
PDPN-202ENST00000376057 HIPK3Q9H422 1215 aa11.71□□□□□ -0.54
PDPN-202ENST00000376057 SYNCQ9H7C4 482 aa11.71□□□□□ -0.54
PDPN-202ENST00000376057 GDF3Q9NR23 364 aa11.71□□□□□ -0.54
PDPN-202ENST00000376057 TMEM51Q9NW97 253 aa11.71□□□□□ -0.54
PDPN-202ENST00000376057 PCYOX1Q9UHG3 505 aa11.71□□□□□ -0.54
PDPN-202ENST00000376057 PCDHB7Q9Y5E2 793 aa11.71□□□□□ -0.54
PDPN-202ENST00000376057 TMEM110-MUSTN1A8MSY1 372 aa11.7□□□□□ -0.54
PDPN-202ENST00000376057 ZNF487B1APH4 448 aa11.7□□□□□ -0.54
PDPN-202ENST00000376057 SYN3O14994 580 aa11.7□□□□□ -0.54
PDPN-202ENST00000376057 ERLIN1O75477 346 aa11.7□□□□□ -0.54
PDPN-202ENST00000376057 OAZ2O95190 189 aa11.7□□□□□ -0.54
PDPN-202ENST00000376057 POMCP01189 267 aa11.7□□□□□ -0.54
PDPN-202ENST00000376057 KRT7P08729 469 aa11.7□□□□□ -0.54
PDPN-202ENST00000376057 PTPN9P43378 593 aa11.7□□□□□ -0.54
PDPN-202ENST00000376057 DHX34Q14147 1143 aaKnown RBP11.7□□□□□ -0.54
PDPN-202ENST00000376057 LONRF2Q1L5Z9 754 aa11.7□□□□□ -0.54
PDPN-202ENST00000376057 RAB41Q5JT25 222 aa11.7□□□□□ -0.54
PDPN-202ENST00000376057 CYP4A22Q5TCH4 519 aa11.7□□□□□ -0.54
PDPN-202ENST00000376057 LLGL2Q6P1M3 1020 aa11.7□□□□□ -0.54
PDPN-202ENST00000376057 DBF4BQ8NFT6 615 aa11.7□□□□□ -0.54
PDPN-202ENST00000376057 KHSRPQ92945 711 aaKnown RBP eCLIP11.7□□□□□ -0.54
PDPN-202ENST00000376057 PNKPQ96T60 521 aa11.7□□□□□ -0.54
PDPN-202ENST00000376057 RTP3Q9BQQ7 232 aa11.7□□□□□ -0.54
PDPN-202ENST00000376057 C11orf84Q9BUA3 381 aaPredicted RBP11.7□□□□□ -0.54
PDPN-202ENST00000376057 TBC1D13Q9NVG8 400 aa11.7□□□□□ -0.54
PDPN-202ENST00000376057 E5RJQ4 531 aa11.7□□□□□ -0.54
PDPN-202ENST00000376057 TRAPPC3O43617 180 aa11.7□□□□□ -0.54
PDPN-202ENST00000376057 GABBR2O75899 941 aa11.7□□□□□ -0.54
PDPN-202ENST00000376057 FBXO21O94952 628 aa11.7□□□□□ -0.54
PDPN-202ENST00000376057 PDGFRBP09619 1106 aa11.7□□□□□ -0.54
PDPN-202ENST00000376057 NPR3P17342 541 aa11.7□□□□□ -0.54
PDPN-202ENST00000376057 CHRNA3P32297 505 aa11.7□□□□□ -0.54
PDPN-202ENST00000376057 C2CD6Q53TS8 623 aa11.7□□□□□ -0.54
PDPN-202ENST00000376057 KIAA0319Q5VV43 1072 aa11.7□□□□□ -0.54
PDPN-202ENST00000376057 CC2D1AQ6P1N0 951 aaPredicted RBP11.7□□□□□ -0.54
PDPN-202ENST00000376057 FAM183BPQ6ZVS7 135 aa11.7□□□□□ -0.54
PDPN-202ENST00000376057 CCDC26Q8TAB7 109 aa11.7□□□□□ -0.54
PDPN-202ENST00000376057 SLC2A14Q8TDB8 520 aa11.7□□□□□ -0.54
PDPN-202ENST00000376057 CENPIQ92674 756 aaPredicted RBP11.7□□□□□ -0.54
PDPN-202ENST00000376057 SYT15Q9BQS2 421 aa11.7□□□□□ -0.54
PDPN-202ENST00000376057 LRRC1Q9BTT6 524 aa11.7□□□□□ -0.54
PDPN-202ENST00000376057 LRRC19Q9H756 370 aa11.7□□□□□ -0.54
PDPN-202ENST00000376057 CRTAC1Q9NQ79 661 aa11.7□□□□□ -0.54
PDPN-202ENST00000376057 EHD2Q9NZN4 543 aa11.7□□□□□ -0.54
PDPN-202ENST00000376057 STIM2Q9P246 746 aa11.7□□□□□ -0.54
PDPN-202ENST00000376057 MTUS1Q9ULD2 1270 aa11.7□□□□□ -0.54
PDPN-202ENST00000376057 NLRC5Q86WI3 1866 aa11.7□□□□□ -0.54
PDPN-202ENST00000376057 HTTP42858 3142 aa11.69□□□□□ -0.54
PDPN-202ENST00000376057 PTPRDP23468 1912 aa11.69□□□□□ -0.54
PDPN-202ENST00000376057 FAM187AA6NFU0 413 aa11.69□□□□□ -0.54
PDPN-202ENST00000376057 CASTOR2A6NHX0 329 aa11.69□□□□□ -0.54
PDPN-202ENST00000376057 GPD1P21695 349 aa11.69□□□□□ -0.54
PDPN-202ENST00000376057 CETN2P41208 172 aa11.69□□□□□ -0.54
PDPN-202ENST00000376057 MARCKSL1P49006 195 aa11.69□□□□□ -0.54
PDPN-202ENST00000376057 FNTAP49354 379 aa11.69□□□□□ -0.54
PDPN-202ENST00000376057 SLC25A11Q02978 314 aaKnown RBP11.69□□□□□ -0.54
PDPN-202ENST00000376057 KLF1Q13351 362 aaPredicted RBP11.69□□□□□ -0.54
PDPN-202ENST00000376057 SIX1Q15475 284 aaPredicted RBP11.69□□□□□ -0.54
PDPN-202ENST00000376057 HADHQ16836 314 aaKnown RBP11.69□□□□□ -0.54
PDPN-202ENST00000376057 INTS6LQ5JSJ4 861 aaKnown RBP11.69□□□□□ -0.54
PDPN-202ENST00000376057 EFHC1Q5JVL4 640 aa11.69□□□□□ -0.54
PDPN-202ENST00000376057 C8orf74Q6P047 294 aa11.69□□□□□ -0.54
PDPN-202ENST00000376057 CNKSR3Q6P9H4 555 aa11.69□□□□□ -0.54
PDPN-202ENST00000376057 MAATS1Q7Z4T9 603 aa11.69□□□□□ -0.54
PDPN-202ENST00000376057 THEM5Q8N1Q8 247 aa11.69□□□□□ -0.54
PDPN-202ENST00000376057 B3GNT5Q9BYG0 378 aa11.69□□□□□ -0.54
PDPN-202ENST00000376057 FRMD8P1Q9BZ68 369 aaPredicted RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms