RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 LIG4P49917 911 aa14.8□□□□□ -0.04
CLCNKA-202ENST00000375692 JAK3P52333 1124 aa14.8□□□□□ -0.04
CLCNKA-202ENST00000375692 NRLP54845 237 aa14.8□□□□□ -0.04
CLCNKA-202ENST00000375692 MRPS35P82673 323 aaKnown RBP14.8□□□□□ -0.04
CLCNKA-202ENST00000375692 ZBTB16Q05516 673 aa14.8□□□□□ -0.04
CLCNKA-202ENST00000375692 SMTNL2Q2TAL5 461 aa14.8□□□□□ -0.04
CLCNKA-202ENST00000375692 ZNF394Q53GI3 561 aa14.8□□□□□ -0.04
CLCNKA-202ENST00000375692 SYCP2LQ5T4T6 812 aa14.8□□□□□ -0.04
CLCNKA-202ENST00000375692 TRIM72Q6ZMU5 477 aa14.8□□□□□ -0.04
CLCNKA-202ENST00000375692 TTC7BQ86TV6 843 aa14.8□□□□□ -0.04
CLCNKA-202ENST00000375692 BANPQ8N9N5 519 aa14.8□□□□□ -0.04
CLCNKA-202ENST00000375692 FBXO36Q8NEA4 188 aa14.8□□□□□ -0.04
CLCNKA-202ENST00000375692 MZB1Q8WU39 189 aa14.8□□□□□ -0.04
CLCNKA-202ENST00000375692 ZNF606Q8WXB4 792 aa14.8□□□□□ -0.04
CLCNKA-202ENST00000375692 CPT1BQ92523 772 aa14.8□□□□□ -0.04
CLCNKA-202ENST00000375692 RMDN3Q96TC7 470 aa14.8□□□□□ -0.04
CLCNKA-202ENST00000375692 KCNK13Q9HB14 408 aa14.8□□□□□ -0.04
CLCNKA-202ENST00000375692 XPNPEP1Q9NQW7 623 aa14.8□□□□□ -0.04
CLCNKA-202ENST00000375692 NFASCO94856 1347 aa14.8□□□□□ -0.04
CLCNKA-202ENST00000375692 MMP8P22894 467 aa14.8□□□□□ -0.04
CLCNKA-202ENST00000375692 CDKN2BP42772 138 aa14.8□□□□□ -0.04
CLCNKA-202ENST00000375692 IREB2P48200 963 aaKnown RBP14.8□□□□□ -0.04
CLCNKA-202ENST00000375692 ERFP50548 548 aa14.8□□□□□ -0.04
CLCNKA-202ENST00000375692 ARFIP2P53365 341 aa14.8□□□□□ -0.04
CLCNKA-202ENST00000375692 PSMD6Q15008 389 aa14.8□□□□□ -0.04
CLCNKA-202ENST00000375692 BBS9Q3SYG4 887 aa14.8□□□□□ -0.04
CLCNKA-202ENST00000375692 TFDP3Q5H9I0 405 aa14.8□□□□□ -0.04
CLCNKA-202ENST00000375692 KCNT1Q5JUK3 1230 aa14.8□□□□□ -0.04
CLCNKA-202ENST00000375692 DCUN1D2Q6PH85 259 aa14.8□□□□□ -0.04
CLCNKA-202ENST00000375692 ADGRD1Q6QNK2 874 aa14.8□□□□□ -0.04
CLCNKA-202ENST00000375692 OR5B17Q8NGF7 314 aa14.8□□□□□ -0.04
CLCNKA-202ENST00000375692 SCG3Q8WXD2 468 aaKnown RBP14.8□□□□□ -0.04
CLCNKA-202ENST00000375692 NSL1Q96IY1 281 aa14.8□□□□□ -0.04
CLCNKA-202ENST00000375692 TRIM55Q9BYV6 548 aa14.8□□□□□ -0.04
CLCNKA-202ENST00000375692 PCDH9Q9HC56 1237 aa14.8□□□□□ -0.04
CLCNKA-202ENST00000375692 STOML1Q9UBI4 398 aa14.8□□□□□ -0.04
CLCNKA-202ENST00000375692 FARP1Q9Y4F1 1045 aaPredicted RBP14.8□□□□□ -0.04
CLCNKA-202ENST00000375692 CAPN9O14815 690 aa14.8□□□□□ -0.04
CLCNKA-202ENST00000375692 ITGAVP06756 1048 aa14.8□□□□□ -0.04
CLCNKA-202ENST00000375692 VHLP40337 213 aa14.8□□□□□ -0.04
CLCNKA-202ENST00000375692 CLDN10P78369 228 aa14.8□□□□□ -0.04
CLCNKA-202ENST00000375692 C11orf91Q3C1V1 193 aa14.8□□□□□ -0.04
CLCNKA-202ENST00000375692 CYP4A22Q5TCH4 519 aa14.8□□□□□ -0.04
CLCNKA-202ENST00000375692 RNF220Q5VTB9 566 aa14.8□□□□□ -0.04
CLCNKA-202ENST00000375692 SWSAP1Q6NVH7 229 aa14.8□□□□□ -0.04
CLCNKA-202ENST00000375692 VPS52Q8N1B4 723 aa14.8□□□□□ -0.04
CLCNKA-202ENST00000375692 DCAKDQ8WVC6 231 aa14.8□□□□□ -0.04
CLCNKA-202ENST00000375692 NKD2Q969F2 451 aaPredicted RBP14.8□□□□□ -0.04
CLCNKA-202ENST00000375692 FAM136AQ96C01 138 aa14.8□□□□□ -0.04
CLCNKA-202ENST00000375692 TSSK1BQ9BXA7 367 aa14.8□□□□□ -0.04
CLCNKA-202ENST00000375692 TMEM120AQ9BXJ8 343 aa14.8□□□□□ -0.04
CLCNKA-202ENST00000375692 NMRK2Q9NPI5 230 aa14.8□□□□□ -0.04
CLCNKA-202ENST00000375692 ARMCX1Q9P291 453 aa14.8□□□□□ -0.04
CLCNKA-202ENST00000375692 MYH9P35579 1960 aaKnown RBP14.79□□□□□ -0.04
CLCNKA-202ENST00000375692 C19orf81C9J6K1 198 aa14.79□□□□□ -0.04
CLCNKA-202ENST00000375692 SOCS7O14512 581 aa14.79□□□□□ -0.04
CLCNKA-202ENST00000375692 KIF3CO14782 793 aa14.79□□□□□ -0.04
CLCNKA-202ENST00000375692 TBX10O75333 385 aa14.79□□□□□ -0.04
CLCNKA-202ENST00000375692 CPA2P48052 419 aa14.79□□□□□ -0.04
CLCNKA-202ENST00000375692 INHBEP58166 350 aa14.79□□□□□ -0.04
CLCNKA-202ENST00000375692 OTUD4Q01804 1114 aaKnown RBP14.79□□□□□ -0.04
CLCNKA-202ENST00000375692 RCN2Q14257 317 aa14.79□□□□□ -0.04
CLCNKA-202ENST00000375692 SPDYAQ5MJ70 313 aa14.79□□□□□ -0.04
CLCNKA-202ENST00000375692 MCF2L2Q86YR7 1114 aa14.79□□□□□ -0.04
CLCNKA-202ENST00000375692 PALM2Q8IXS6 379 aa14.79□□□□□ -0.04
CLCNKA-202ENST00000375692 PHC3Q8NDX5 983 aa14.79□□□□□ -0.04
CLCNKA-202ENST00000375692 ACTL9Q8TC94 416 aa14.79□□□□□ -0.04
CLCNKA-202ENST00000375692 SH3TC2Q8TF17 1288 aa14.79□□□□□ -0.04
CLCNKA-202ENST00000375692 TTC17Q96AE7 1141 aa14.79□□□□□ -0.04
CLCNKA-202ENST00000375692 TSC22D3Q99576 134 aa14.79□□□□□ -0.04
CLCNKA-202ENST00000375692 ZWILCHQ9H900 591 aa14.79□□□□□ -0.04
CLCNKA-202ENST00000375692 TAS2R1Q9NYW7 299 aa14.79□□□□□ -0.04
CLCNKA-202ENST00000375692 AGO2Q9UKV8 859 aaKnown RBP14.79□□□□□ -0.04
CLCNKA-202ENST00000375692 STBD1O95210 358 aa14.79□□□□□ -0.04
CLCNKA-202ENST00000375692 LMNAP02545 664 aaKnown RBP14.79□□□□□ -0.04
CLCNKA-202ENST00000375692 NEFHP12036 1026 aa14.79□□□□□ -0.04
CLCNKA-202ENST00000375692 BGNP21810 368 aa14.79□□□□□ -0.04
CLCNKA-202ENST00000375692 SP100P23497 879 aaPredicted RBP14.79□□□□□ -0.04
CLCNKA-202ENST00000375692 RPL22P35268 128 aaKnown RBP14.79□□□□□ -0.04
CLCNKA-202ENST00000375692 KRT76Q01546 638 aa14.79□□□□□ -0.04
CLCNKA-202ENST00000375692 RASA2Q15283 850 aa14.79□□□□□ -0.04
CLCNKA-202ENST00000375692 CMPK2Q5EBM0 449 aa14.79□□□□□ -0.04
CLCNKA-202ENST00000375692 DNAJC24Q6P3W2 148 aa14.79□□□□□ -0.04
CLCNKA-202ENST00000375692 IGDCC3Q8IVU1 814 aa14.79□□□□□ -0.04
CLCNKA-202ENST00000375692 ATP11CQ8NB49 1132 aa14.79□□□□□ -0.04
CLCNKA-202ENST00000375692 SLC35B2Q8TB61 432 aa14.79□□□□□ -0.04
CLCNKA-202ENST00000375692 ZNF398Q8TD17 642 aa14.79□□□□□ -0.04
CLCNKA-202ENST00000375692 TEKT4Q8WW24 435 aa14.79□□□□□ -0.04
CLCNKA-202ENST00000375692 MCUR1Q96AQ8 359 aa14.79□□□□□ -0.04
CLCNKA-202ENST00000375692 SERAC1Q96JX3 654 aa14.79□□□□□ -0.04
CLCNKA-202ENST00000375692 FAM111AQ96PZ2 611 aa14.79□□□□□ -0.04
CLCNKA-202ENST00000375692 PDCD2LQ9BRP1 358 aa14.79□□□□□ -0.04
CLCNKA-202ENST00000375692 DHRS4Q9BTZ2 278 aa14.79□□□□□ -0.04
CLCNKA-202ENST00000375692 POLR3FQ9H1D9 316 aaPredicted RBP14.79□□□□□ -0.04
CLCNKA-202ENST00000375692 ACSS3Q9H6R3 686 aa14.79□□□□□ -0.04
CLCNKA-202ENST00000375692 SEPT9Q9UHD8 586 aaPredicted RBP14.79□□□□□ -0.04
CLCNKA-202ENST00000375692 PCDHA10Q9Y5I2 948 aa14.79□□□□□ -0.04
CLCNKA-202ENST00000375692 PHIPQ8WWQ0 1821 aa14.78□□□□□ -0.04
CLCNKA-202ENST00000375692 TMEM63AO94886 807 aa14.78□□□□□ -0.04
CLCNKA-202ENST00000375692 GNAT1P11488 350 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms