RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 LSM14BQ9BX40 385 aaKnown RBP13.06□□□□□ -0.32
LSM2-208ENST00000375661 ZCWPW1Q9H0M4 648 aa13.06□□□□□ -0.32
LSM2-208ENST00000375661 IL21Q9HBE4 155 aa13.06□□□□□ -0.32
LSM2-208ENST00000375661 AGPAT3Q9NRZ7 376 aa13.06□□□□□ -0.32
LSM2-208ENST00000375661 GKN1Q9NS71 199 aa13.06□□□□□ -0.32
LSM2-208ENST00000375661 TMEM63CQ9P1W3 806 aa13.06□□□□□ -0.32
LSM2-208ENST00000375661 USP24Q9UPU5 2620 aa13.06□□□□□ -0.32
LSM2-208ENST00000375661 PIRO00625 290 aa13.05□□□□□ -0.32
LSM2-208ENST00000375661 SOAT2O75908 522 aa13.05□□□□□ -0.32
LSM2-208ENST00000375661 CD44P16070 742 aaKnown RBP13.05□□□□□ -0.32
LSM2-208ENST00000375661 ATF6P18850 670 aa13.05□□□□□ -0.32
LSM2-208ENST00000375661 DRD1P21728 446 aa13.05□□□□□ -0.32
LSM2-208ENST00000375661 GARTP22102 1010 aa13.05□□□□□ -0.32
LSM2-208ENST00000375661 CYP4F8P98187 520 aa13.05□□□□□ -0.32
LSM2-208ENST00000375661 ENOX2Q16206 610 aaKnown RBP13.05□□□□□ -0.32
LSM2-208ENST00000375661 TAF12Q16514 161 aa13.05□□□□□ -0.32
LSM2-208ENST00000375661 MGAT5BQ3V5L5 792 aa13.05□□□□□ -0.32
LSM2-208ENST00000375661 C9orf57Q5W0N0 161 aa13.05□□□□□ -0.32
LSM2-208ENST00000375661 FSTL4Q6MZW2 842 aa13.05□□□□□ -0.32
LSM2-208ENST00000375661 KBTBD6Q86V97 674 aa13.05□□□□□ -0.32
LSM2-208ENST00000375661 METTL23Q86XA0 190 aa13.05□□□□□ -0.32
LSM2-208ENST00000375661 CMTM8Q8IZV2 173 aa13.05□□□□□ -0.32
LSM2-208ENST00000375661 TRIML1Q8N9V2 468 aa13.05□□□□□ -0.32
LSM2-208ENST00000375661 OR10T2Q8NGX3 314 aa13.05□□□□□ -0.32
LSM2-208ENST00000375661 SPPL2BQ8TCT7 592 aa13.05□□□□□ -0.32
LSM2-208ENST00000375661 POMGNT1Q8WZA1 660 aa13.05□□□□□ -0.32
LSM2-208ENST00000375661 SEPT5Q99719 369 aaPredicted RBP13.05□□□□□ -0.32
LSM2-208ENST00000375661 LPIN3Q9BQK8 851 aa13.05□□□□□ -0.32
LSM2-208ENST00000375661 MSTO1Q9BUK6 570 aa13.05□□□□□ -0.32
LSM2-208ENST00000375661 SLC46A2Q9BY10 475 aa13.05□□□□□ -0.32
LSM2-208ENST00000375661 AGO2Q9UKV8 859 aaKnown RBP13.05□□□□□ -0.32
LSM2-208ENST00000375661 CHD8Q9HCK8 2581 aa13.05□□□□□ -0.32
LSM2-208ENST00000375661 SDK1Q7Z5N4 2213 aa13.04□□□□□ -0.32
LSM2-208ENST00000375661 HELZP42694 1942 aaKnown RBP13.04□□□□□ -0.32
LSM2-208ENST00000375661 ANO9A1A5B4 782 aa13.04□□□□□ -0.32
LSM2-208ENST00000375661 PPP1R3GB7ZBB8 358 aa13.04□□□□□ -0.32
LSM2-208ENST00000375661 PDXKO00764 312 aa13.04□□□□□ -0.32
LSM2-208ENST00000375661 PPEF2O14830 753 aa13.04□□□□□ -0.32
LSM2-208ENST00000375661 CLIC2O15247 247 aa13.04□□□□□ -0.32
LSM2-208ENST00000375661 RHOBTB1O94844 696 aa13.04□□□□□ -0.32
LSM2-208ENST00000375661 KCNK5O95279 499 aa13.04□□□□□ -0.32
LSM2-208ENST00000375661 HAPLN1P10915 354 aaPredicted RBP13.04□□□□□ -0.32
LSM2-208ENST00000375661 PTMSP20962 102 aa13.04□□□□□ -0.32
LSM2-208ENST00000375661 AVPR1AP37288 418 aa13.04□□□□□ -0.32
LSM2-208ENST00000375661 MPLP40238 635 aa13.04□□□□□ -0.32
LSM2-208ENST00000375661 GUCY2FP51841 1108 aa13.04□□□□□ -0.32
LSM2-208ENST00000375661 SNRPFP62306 86 aaKnown RBP13.04□□□□□ -0.32
LSM2-208ENST00000375661 POU5F1Q01860 360 aaKnown RBP13.04□□□□□ -0.32
LSM2-208ENST00000375661 BFSP1Q12934 665 aa13.04□□□□□ -0.32
LSM2-208ENST00000375661 ZNF268Q14587 947 aaPredicted RBP13.04□□□□□ -0.32
LSM2-208ENST00000375661 NFKBIBQ15653 356 aa13.04□□□□□ -0.32
LSM2-208ENST00000375661 ELF2Q15723 593 aa13.04□□□□□ -0.32
LSM2-208ENST00000375661 KLHL40Q2TBA0 621 aa13.04□□□□□ -0.32
LSM2-208ENST00000375661 PLK5Q496M5 336 aa13.04□□□□□ -0.32
LSM2-208ENST00000375661 SLC39A12Q504Y0 691 aa13.04□□□□□ -0.32
LSM2-208ENST00000375661 CCDC183Q5T5S1 534 aa13.04□□□□□ -0.32
LSM2-208ENST00000375661 JADE1Q6IE81 842 aa13.04□□□□□ -0.32
LSM2-208ENST00000375661 PKN3Q6P5Z2 889 aa13.04□□□□□ -0.32
LSM2-208ENST00000375661 CRELD2Q6UXH1 353 aaPredicted RBP13.04□□□□□ -0.32
LSM2-208ENST00000375661 C12orf56Q8IXR9 622 aa13.04□□□□□ -0.32
LSM2-208ENST00000375661 THEM5Q8N1Q8 247 aa13.04□□□□□ -0.32
LSM2-208ENST00000375661 TMEM130Q8N3G9 435 aa13.04□□□□□ -0.32
LSM2-208ENST00000375661 GTPBP4Q9BZE4 634 aaKnown RBP13.04□□□□□ -0.32
LSM2-208ENST00000375661 PCIF1Q9H4Z3 704 aa13.04□□□□□ -0.32
LSM2-208ENST00000375661 ASB7Q9H672 318 aa13.04□□□□□ -0.32
LSM2-208ENST00000375661 HPS4Q9NQG7 708 aa13.04□□□□□ -0.32
LSM2-208ENST00000375661 RXFP3Q9NSD7 469 aa13.04□□□□□ -0.32
LSM2-208ENST00000375661 CPSF3Q9UKF6 684 aaKnown RBP13.04□□□□□ -0.32
LSM2-208ENST00000375661 ANAPC1Q9H1A4 1944 aa13.03□□□□□ -0.32
LSM2-208ENST00000375661 GOLGA8IPA6NC78 632 aa13.03□□□□□ -0.32
LSM2-208ENST00000375661 GOLGA8JA6NMD2 632 aa13.03□□□□□ -0.32
LSM2-208ENST00000375661 KIF20AO95235 890 aa13.03□□□□□ -0.32
LSM2-208ENST00000375661 F11P03951 625 aa13.03□□□□□ -0.32
LSM2-208ENST00000375661 PROS1P07225 676 aa13.03□□□□□ -0.32
LSM2-208ENST00000375661 ACOT2P49753 483 aa13.03□□□□□ -0.32
LSM2-208ENST00000375661 PDGFRLQ15198 375 aa13.03□□□□□ -0.32
LSM2-208ENST00000375661 ZCWPW2Q504Y3 356 aa13.03□□□□□ -0.32
LSM2-208ENST00000375661 RNF43Q68DV7 783 aa13.03□□□□□ -0.32
LSM2-208ENST00000375661 CC2D1AQ6P1N0 951 aaPredicted RBP13.03□□□□□ -0.32
LSM2-208ENST00000375661 HS2ST1Q7LGA3 356 aa13.03□□□□□ -0.32
LSM2-208ENST00000375661 C11orf74Q86VG3 221 aa13.03□□□□□ -0.32
LSM2-208ENST00000375661 DCP1BQ8IZD4 617 aaKnown RBP13.03□□□□□ -0.32
LSM2-208ENST00000375661 CCDC26Q8TAB7 109 aa13.03□□□□□ -0.32
LSM2-208ENST00000375661 TMEM174Q8WUU8 243 aa13.03□□□□□ -0.32
LSM2-208ENST00000375661 SAAL1Q96ER3 474 aa13.03□□□□□ -0.32
LSM2-208ENST00000375661 TDP1Q9NUW8 608 aa13.03□□□□□ -0.32
LSM2-208ENST00000375661 DMAC2Q9NW81 257 aa13.03□□□□□ -0.32
LSM2-208ENST00000375661 HSPBP1Q9NZL4 362 aa13.03□□□□□ -0.32
LSM2-208ENST00000375661 CGNQ9P2M7 1197 aaKnown RBP13.03□□□□□ -0.32
LSM2-208ENST00000375661 EBF1Q9UH73 591 aa13.03□□□□□ -0.32
LSM2-208ENST00000375661 TRAF3IP3Q9Y228 551 aa13.03□□□□□ -0.32
LSM2-208ENST00000375661 C2CD2Q9Y426 696 aa13.03□□□□□ -0.32
LSM2-208ENST00000375661 THADAQ6YHU6 1953 aa13.02□□□□□ -0.32
LSM2-208ENST00000375661 RNF40O75150 1001 aa13.02□□□□□ -0.33
LSM2-208ENST00000375661 EGFP01133 1207 aa13.02□□□□□ -0.33
LSM2-208ENST00000375661 HOXC13P31276 330 aa13.02□□□□□ -0.33
LSM2-208ENST00000375661 PXNP49023 591 aaPredicted RBP13.02□□□□□ -0.33
LSM2-208ENST00000375661 TAF6P49848 677 aa13.02□□□□□ -0.33
LSM2-208ENST00000375661 PMS1P54277 932 aaKnown RBP13.02□□□□□ -0.33
LSM2-208ENST00000375661 NLRP12P59046 1061 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms