RNA–Protein interactions for RNA: ENST00000375446.4

NINJ1-201, Transcript of ninjurin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NINJ1, Length 1,281 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NINJ1-201ENST00000375446 FAXDC2Q96IV6 333 aa23.16■■□□□ 1.3
NINJ1-201ENST00000375446 C8orf48Q96LL4 319 aa23.16■■□□□ 1.3
NINJ1-201ENST00000375446 MYRFLQ96LU7 910 aa23.16■■□□□ 1.3
NINJ1-201ENST00000375446 CEP295NLQ96MC4 621 aa23.16■■□□□ 1.3
NINJ1-201ENST00000375446 TASP1Q9H6P5 420 aa23.16■■□□□ 1.3
NINJ1-201ENST00000375446 UXTQ9UBK9 157 aaPredicted RBP23.16■■□□□ 1.3
NINJ1-201ENST00000375446 F8VP50 259 aa23.15■■□□□ 1.3
NINJ1-201ENST00000375446 FGFR1OPO95684 399 aaKnown RBP23.15■■□□□ 1.3
NINJ1-201ENST00000375446 VIPR2P41587 438 aa23.15■■□□□ 1.3
NINJ1-201ENST00000375446 CACNA2D1P54289 1103 aa23.15■■□□□ 1.3
NINJ1-201ENST00000375446 SUGP1Q8IWZ8 645 aaKnown RBP23.15■■□□□ 1.3
NINJ1-201ENST00000375446 SIX5Q8N196 739 aa23.15■■□□□ 1.3
NINJ1-201ENST00000375446 MED10Q9BTT4 135 aa23.15■■□□□ 1.3
NINJ1-201ENST00000375446 ATP8B3O60423 1300 aa23.14■■□□□ 1.3
NINJ1-201ENST00000375446 CD58P19256 250 aa23.14■■□□□ 1.29
NINJ1-201ENST00000375446 COL9A1P20849 921 aa23.14■■□□□ 1.29
NINJ1-201ENST00000375446 FMO5P49326 533 aa23.14■■□□□ 1.29
NINJ1-201ENST00000375446 PAQR9Q6ZVX9 377 aa23.14■■□□□ 1.29
NINJ1-201ENST00000375446 FAM35AQ86V20 835 aa23.14■■□□□ 1.29
NINJ1-201ENST00000375446 GPT2Q8TD30 523 aa23.14■■□□□ 1.29
NINJ1-201ENST00000375446 TATDN2Q93075 761 aa23.14■■□□□ 1.29
NINJ1-201ENST00000375446 TWNKQ96RR1 684 aa23.14■■□□□ 1.29
NINJ1-201ENST00000375446 NT5C1AQ9BXI3 368 aa23.14■■□□□ 1.29
NINJ1-201ENST00000375446 TMEM30AQ9NV96 361 aa23.14■■□□□ 1.29
NINJ1-201ENST00000375446 CILPO75339 1184 aa23.13■■□□□ 1.29
NINJ1-201ENST00000375446 TRIM21P19474 475 aaKnown RBP23.13■■□□□ 1.29
NINJ1-201ENST00000375446 MARSP56192 900 aaKnown RBP23.13■■□□□ 1.29
NINJ1-201ENST00000375446 GRM2Q14416 872 aa23.13■■□□□ 1.29
NINJ1-201ENST00000375446 DENND5BQ6ZUT9 1274 aa23.13■■□□□ 1.29
NINJ1-201ENST00000375446 ARID3BQ8IVW6 561 aaPredicted RBP23.13■■□□□ 1.29
NINJ1-201ENST00000375446 TRIM59Q8IWR1 403 aa23.13■■□□□ 1.29
NINJ1-201ENST00000375446 FUKQ8N0W3 1084 aa23.13■■□□□ 1.29
NINJ1-201ENST00000375446 MRPS31Q92665 395 aaKnown RBP23.13■■□□□ 1.29
NINJ1-201ENST00000375446 E2F7Q96AV8 911 aa23.13■■□□□ 1.29
NINJ1-201ENST00000375446 MED15Q96RN5 788 aa23.13■■□□□ 1.29
NINJ1-201ENST00000375446 SLC46A2Q9BY10 475 aa23.13■■□□□ 1.29
NINJ1-201ENST00000375446 MFSD1Q9H3U5 465 aa23.13■■□□□ 1.29
NINJ1-201ENST00000375446 ZMYM5Q9UJ78 669 aa23.13■■□□□ 1.29
NINJ1-201ENST00000375446 CA14Q9ULX7 337 aa23.13■■□□□ 1.29
NINJ1-201ENST00000375446 PMM2O15305 246 aa23.12■■□□□ 1.29
NINJ1-201ENST00000375446 TADA3O75528 432 aa23.12■■□□□ 1.29
NINJ1-201ENST00000375446 CCDC192P0DO97 292 aa23.12■■□□□ 1.29
NINJ1-201ENST00000375446 CCDC130P13994 396 aa23.12■■□□□ 1.29
NINJ1-201ENST00000375446 DDX6P26196 483 aaKnown RBP eCLIP23.12■■□□□ 1.29
NINJ1-201ENST00000375446 WEE1P30291 646 aa23.12■■□□□ 1.29
NINJ1-201ENST00000375446 DPCR1Q3MIW9 517 aa23.12■■□□□ 1.29
NINJ1-201ENST00000375446 VITQ6UXI7 678 aa23.12■■□□□ 1.29
NINJ1-201ENST00000375446 GPIHBP1Q8IV16 184 aa23.12■■□□□ 1.29
NINJ1-201ENST00000375446 TTC39CQ8N584 583 aa23.12■■□□□ 1.29
NINJ1-201ENST00000375446 C12orf29Q8N999 325 aa23.12■■□□□ 1.29
NINJ1-201ENST00000375446 WHAMMQ8TF30 809 aa23.12■■□□□ 1.29
NINJ1-201ENST00000375446 DEPDC1BQ8WUY9 529 aa23.12■■□□□ 1.29
NINJ1-201ENST00000375446 RSPRY1Q96DX4 576 aa23.12■■□□□ 1.29
NINJ1-201ENST00000375446 TRMT61BQ9BVS5 477 aaKnown RBP23.12■■□□□ 1.29
NINJ1-201ENST00000375446 DNAI2Q9GZS0 605 aa23.12■■□□□ 1.29
NINJ1-201ENST00000375446 FAM49BQ9NUQ9 324 aa23.12■■□□□ 1.29
NINJ1-201ENST00000375446 EHD2Q9NZN4 543 aa23.12■■□□□ 1.29
NINJ1-201ENST00000375446 NCANO14594 1321 aa23.11■■□□□ 1.29
NINJ1-201ENST00000375446 KRBA1A5PL33 1030 aa23.11■■□□□ 1.29
NINJ1-201ENST00000375446 HEPACAM2A8MVW5 462 aa23.11■■□□□ 1.29
NINJ1-201ENST00000375446 PSMC3P17980 439 aa23.11■■□□□ 1.29
NINJ1-201ENST00000375446 USP46P62068 366 aa23.11■■□□□ 1.29
NINJ1-201ENST00000375446 PFKPQ01813 784 aa23.11■■□□□ 1.29
NINJ1-201ENST00000375446 MON1AQ86VX9 555 aa23.11■■□□□ 1.29
NINJ1-201ENST00000375446 MFSD6LQ8IWD5 586 aa23.11■■□□□ 1.29
NINJ1-201ENST00000375446 MAB21L3Q8N8X9 362 aa23.11■■□□□ 1.29
NINJ1-201ENST00000375446 SLC2A14Q8TDB8 520 aa23.11■■□□□ 1.29
NINJ1-201ENST00000375446 SMARCD1Q96GM5 515 aa23.11■■□□□ 1.29
NINJ1-201ENST00000375446 ARID3AQ99856 593 aa23.11■■□□□ 1.29
NINJ1-201ENST00000375446 TTLL2Q9BWV7 592 aa23.11■■□□□ 1.29
NINJ1-201ENST00000375446 DMAP1Q9NPF5 467 aaPredicted RBP23.11■■□□□ 1.29
NINJ1-201ENST00000375446 ARHGEF3Q9NR81 526 aa23.11■■□□□ 1.29
NINJ1-201ENST00000375446 KRT82Q9NSB4 513 aa23.11■■□□□ 1.29
NINJ1-201ENST00000375446 CISHQ9NSE2 258 aa23.11■■□□□ 1.29
NINJ1-201ENST00000375446 UTP18Q9Y5J1 556 aaKnown RBP eCLIP23.11■■□□□ 1.29
NINJ1-201ENST00000375446 ZDBF2Q9HCK1 2354 aa23.11■■□□□ 1.29
NINJ1-201ENST00000375446 SOBPA7XYQ1 873 aa23.1■■□□□ 1.29
NINJ1-201ENST00000375446 P4HA2O15460 535 aa23.1■■□□□ 1.29
NINJ1-201ENST00000375446 AP1G2O75843 785 aa23.1■■□□□ 1.29
NINJ1-201ENST00000375446 PRAMEF12O95522 483 aa23.1■■□□□ 1.29
NINJ1-201ENST00000375446 NPR3P17342 541 aa23.1■■□□□ 1.29
NINJ1-201ENST00000375446 CETN1Q12798 172 aa23.1■■□□□ 1.29
NINJ1-201ENST00000375446 TXNDC8Q6A555 127 aa23.1■■□□□ 1.29
NINJ1-201ENST00000375446 CMTM8Q8IZV2 173 aa23.1■■□□□ 1.29
NINJ1-201ENST00000375446 FLCNQ8NFG4 579 aa23.1■■□□□ 1.29
NINJ1-201ENST00000375446 KCNK16Q96T55 309 aa23.1■■□□□ 1.29
NINJ1-201ENST00000375446 FAM124BQ9H5Z6 455 aaPredicted RBP23.1■■□□□ 1.29
NINJ1-201ENST00000375446 BRD9Q9H8M2 597 aa23.1■■□□□ 1.29
NINJ1-201ENST00000375446 RAPGEFL1Q9UHV5 662 aa23.1■■□□□ 1.29
NINJ1-201ENST00000375446 DACH1Q9UI36 760 aa23.1■■□□□ 1.29
NINJ1-201ENST00000375446 HCN4Q9Y3Q4 1203 aa23.1■■□□□ 1.29
NINJ1-201ENST00000375446 DPYSL4O14531 572 aa23.09■■□□□ 1.29
NINJ1-201ENST00000375446 AFPP02771 609 aaKnown RBP23.09■■□□□ 1.29
NINJ1-201ENST00000375446 GDI1P31150 447 aa23.09■■□□□ 1.29
NINJ1-201ENST00000375446 VCPP55072 806 aaKnown RBP23.09■■□□□ 1.29
NINJ1-201ENST00000375446 KCNH2Q12809 1159 aa23.09■■□□□ 1.29
NINJ1-201ENST00000375446 LRMPQ12912 555 aa23.09■■□□□ 1.29
NINJ1-201ENST00000375446 CUL2Q13617 745 aa23.09■■□□□ 1.29
NINJ1-201ENST00000375446 ZNF394Q53GI3 561 aa23.09■■□□□ 1.29
NINJ1-201ENST00000375446 CYFIP2Q96F07 1278 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms