RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 SCG3Q8WXD2 468 aaKnown RBP18.74■□□□□ 0.59
PTPDC1-202ENST00000375360 PRMT1Q99873 361 aaKnown RBP18.74■□□□□ 0.59
PTPDC1-202ENST00000375360 APOL2Q9BQE5 337 aa18.74■□□□□ 0.59
PTPDC1-202ENST00000375360 SYT15Q9BQS2 421 aa18.74■□□□□ 0.59
PTPDC1-202ENST00000375360 COLEC11Q9BWP8 271 aa18.74■□□□□ 0.59
PTPDC1-202ENST00000375360 FUT8Q9BYC5 575 aa18.74■□□□□ 0.59
PTPDC1-202ENST00000375360 VCX3BQ9H321 246 aa18.74■□□□□ 0.59
PTPDC1-202ENST00000375360 VIPAS39Q9H9C1 493 aa18.74■□□□□ 0.59
PTPDC1-202ENST00000375360 NFASCO94856 1347 aa18.74■□□□□ 0.59
PTPDC1-202ENST00000375360 KPNA7A9QM74 516 aa18.73■□□□□ 0.59
PTPDC1-202ENST00000375360 PSTPIP1O43586 416 aa18.73■□□□□ 0.59
PTPDC1-202ENST00000375360 ALDH1A3P47895 512 aa18.73■□□□□ 0.59
PTPDC1-202ENST00000375360 ZNF280AP59817 542 aaPredicted RBP18.73■□□□□ 0.59
PTPDC1-202ENST00000375360 CENPCQ03188 943 aa18.73■□□□□ 0.59
PTPDC1-202ENST00000375360 MAPRE1Q15691 268 aaKnown RBP18.73■□□□□ 0.59
PTPDC1-202ENST00000375360 PTGISQ16647 500 aa18.73■□□□□ 0.59
PTPDC1-202ENST00000375360 LMNTD2Q8IXW0 634 aa18.73■□□□□ 0.59
PTPDC1-202ENST00000375360 RNF208Q9H0X6 261 aa18.73■□□□□ 0.59
PTPDC1-202ENST00000375360 CFAP69A5D8W1 941 aa18.73■□□□□ 0.59
PTPDC1-202ENST00000375360 PHF20L1A8MW92 1017 aa18.73■□□□□ 0.59
PTPDC1-202ENST00000375360 ZNF862O60290 1169 aa18.73■□□□□ 0.59
PTPDC1-202ENST00000375360 DIAPH2O60879 1101 aa18.73■□□□□ 0.59
PTPDC1-202ENST00000375360 SKIP12755 728 aa18.73■□□□□ 0.59
PTPDC1-202ENST00000375360 FNTAP49354 379 aa18.73■□□□□ 0.59
PTPDC1-202ENST00000375360 TDRD10Q5VZ19 366 aaKnown RBP18.73■□□□□ 0.59
PTPDC1-202ENST00000375360 AADACL2Q6P093 401 aa18.73■□□□□ 0.59
PTPDC1-202ENST00000375360 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.73■□□□□ 0.59
PTPDC1-202ENST00000375360 TTC8Q8TAM2 541 aa18.73■□□□□ 0.59
PTPDC1-202ENST00000375360 MDM1Q8TC05 714 aa18.73■□□□□ 0.59
PTPDC1-202ENST00000375360 L1RE1Q9UN81 338 aa18.73■□□□□ 0.59
PTPDC1-202ENST00000375360 CHN1P15882 459 aa18.73■□□□□ 0.59
PTPDC1-202ENST00000375360 OVOS1Q6IE37 1185 aa18.73■□□□□ 0.59
PTPDC1-202ENST00000375360 NUF2Q9BZD4 464 aa18.73■□□□□ 0.59
PTPDC1-202ENST00000375360 GANQ9H2C0 597 aa18.73■□□□□ 0.59
PTPDC1-202ENST00000375360 NUDT5Q9UKK9 219 aa18.73■□□□□ 0.59
PTPDC1-202ENST00000375360 A0A0A6YYK5 440 aaPredicted RBP18.73■□□□□ 0.59
PTPDC1-202ENST00000375360 F8VP50 259 aa18.73■□□□□ 0.59
PTPDC1-202ENST00000375360 CLK2P49760 499 aaKnown RBP18.73■□□□□ 0.59
PTPDC1-202ENST00000375360 C1QBPQ07021 282 aaKnown RBP18.73■□□□□ 0.59
PTPDC1-202ENST00000375360 DRP2Q13474 957 aa18.73■□□□□ 0.59
PTPDC1-202ENST00000375360 ACTRT1Q8TDG2 376 aa18.73■□□□□ 0.59
PTPDC1-202ENST00000375360 E5RI56 91 aa18.72■□□□□ 0.59
PTPDC1-202ENST00000375360 CEP41Q9BYV8 373 aa18.72■□□□□ 0.59
PTPDC1-202ENST00000375360 MUC3BQ9H195 1237 aa18.72■□□□□ 0.59
PTPDC1-202ENST00000375360 TMEM134Q9H6X4 195 aa18.72■□□□□ 0.59
PTPDC1-202ENST00000375360 ADIGQ0VDE8 80 aa18.72■□□□□ 0.59
PTPDC1-202ENST00000375360 DBN1Q16643 649 aa18.72■□□□□ 0.59
PTPDC1-202ENST00000375360 TMTC4Q5T4D3 741 aa18.72■□□□□ 0.59
PTPDC1-202ENST00000375360 SPOCD1Q6ZMY3 1216 aa18.72■□□□□ 0.59
PTPDC1-202ENST00000375360 NT5DC3Q86UY8 548 aa18.72■□□□□ 0.59
PTPDC1-202ENST00000375360 BSNDQ8WZ55 320 aa18.72■□□□□ 0.59
PTPDC1-202ENST00000375360 FBXO32Q969P5 355 aa18.72■□□□□ 0.59
PTPDC1-202ENST00000375360 RMDN2Q96LZ7 410 aa18.72■□□□□ 0.59
PTPDC1-202ENST00000375360 ZNF214Q9UL59 606 aaPredicted RBP18.72■□□□□ 0.59
PTPDC1-202ENST00000375360 AP4E1Q9UPM8 1137 aa18.72■□□□□ 0.59
PTPDC1-202ENST00000375360 NRCAMQ92823 1304 aa18.72■□□□□ 0.59
PTPDC1-202ENST00000375360 LSM8O95777 96 aaKnown RBP18.72■□□□□ 0.59
PTPDC1-202ENST00000375360 SMIM10L2AP0DMW4 78 aa18.72■□□□□ 0.59
PTPDC1-202ENST00000375360 SMIM10L2BP0DMW5 78 aa18.72■□□□□ 0.59
PTPDC1-202ENST00000375360 PPARGP37231 505 aaPredicted RBP18.72■□□□□ 0.59
PTPDC1-202ENST00000375360 MDH1P40925 334 aaKnown RBP18.72■□□□□ 0.59
PTPDC1-202ENST00000375360 ZNF200P98182 395 aaPredicted RBP18.72■□□□□ 0.59
PTPDC1-202ENST00000375360 BFSP2Q13515 415 aa18.72■□□□□ 0.59
PTPDC1-202ENST00000375360 COBLL1Q53SF7 1204 aa18.72■□□□□ 0.59
PTPDC1-202ENST00000375360 MARCOQ9UEW3 520 aaPredicted RBP18.72■□□□□ 0.59
PTPDC1-202ENST00000375360 SNCAIPQ9Y6H5 919 aa18.72■□□□□ 0.59
PTPDC1-202ENST00000375360 FAM208AQ9UK61 1670 aaKnown RBP18.72■□□□□ 0.59
PTPDC1-202ENST00000375360 KPNA6O60684 536 aa18.72■□□□□ 0.59
PTPDC1-202ENST00000375360 TAC1P20366 129 aa18.72■□□□□ 0.59
PTPDC1-202ENST00000375360 TWF1Q12792 350 aa18.72■□□□□ 0.59
PTPDC1-202ENST00000375360 EFEMP1Q12805 493 aa18.72■□□□□ 0.59
PTPDC1-202ENST00000375360 CHADLQ6NUI6 762 aa18.72■□□□□ 0.59
PTPDC1-202ENST00000375360 SLFN11Q7Z7L1 901 aa18.72■□□□□ 0.59
PTPDC1-202ENST00000375360 ZNF410Q86VK4 478 aa18.72■□□□□ 0.59
PTPDC1-202ENST00000375360 ZNF669Q96BR6 464 aaPredicted RBP18.72■□□□□ 0.59
PTPDC1-202ENST00000375360 HMX1Q9NP08 348 aaPredicted RBP18.72■□□□□ 0.59
PTPDC1-202ENST00000375360 MROH7Q68CQ1 1323 aa18.71■□□□□ 0.59
PTPDC1-202ENST00000375360 MICAL2O94851 1124 aa18.71■□□□□ 0.59
PTPDC1-202ENST00000375360 AGTP01019 485 aa18.71■□□□□ 0.59
PTPDC1-202ENST00000375360 KCNA2P16389 499 aa18.71■□□□□ 0.59
PTPDC1-202ENST00000375360 STIP1P31948 543 aaKnown RBP18.71■□□□□ 0.59
PTPDC1-202ENST00000375360 FLT3LGP49771 235 aa18.71■□□□□ 0.59
PTPDC1-202ENST00000375360 SCNN1GP51170 649 aa18.71■□□□□ 0.59
PTPDC1-202ENST00000375360 YWHAHQ04917 246 aaPredicted RBP18.71■□□□□ 0.59
PTPDC1-202ENST00000375360 DAB2IPQ5VWQ8 1189 aa18.71■□□□□ 0.59
PTPDC1-202ENST00000375360 MFSD7Q6UXD7 560 aa18.71■□□□□ 0.59
PTPDC1-202ENST00000375360 ACO2Q99798 780 aaKnown RBP18.71■□□□□ 0.59
PTPDC1-202ENST00000375360 AFF4Q9UHB7 1163 aaKnown RBP18.71■□□□□ 0.59
PTPDC1-202ENST00000375360 BCAP29Q9UHQ4 241 aa18.71■□□□□ 0.59
PTPDC1-202ENST00000375360 SLC15A5A6NIM6 579 aa18.71■□□□□ 0.59
PTPDC1-202ENST00000375360 E5RJQ4 531 aa18.71■□□□□ 0.59
PTPDC1-202ENST00000375360 ENDOD1O94919 500 aa18.71■□□□□ 0.59
PTPDC1-202ENST00000375360 ALDH2P05091 517 aa18.71■□□□□ 0.59
PTPDC1-202ENST00000375360 HSPA9P38646 679 aaKnown RBP18.71■□□□□ 0.59
PTPDC1-202ENST00000375360 BST2Q10589 180 aaKnown RBP18.71■□□□□ 0.59
PTPDC1-202ENST00000375360 ARL8AQ96BM9 186 aa18.71■□□□□ 0.59
PTPDC1-202ENST00000375360 PPP1R36Q96LQ0 422 aa18.71■□□□□ 0.59
PTPDC1-202ENST00000375360 ANKZF1Q9H8Y5 726 aa18.71■□□□□ 0.59
PTPDC1-202ENST00000375360 CLNS1AP54105 237 aaKnown RBP18.71■□□□□ 0.59
PTPDC1-202ENST00000375360 RAD51Q06609 339 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms