RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 PPIL2Q13356 520 aa12.72□□□□□ -0.37
C9orf3-203ENST00000375315 KRT72Q14CN4 511 aa12.72□□□□□ -0.37
C9orf3-203ENST00000375315 RHBDF2Q6PJF5 856 aa12.72□□□□□ -0.37
C9orf3-203ENST00000375315 PADI6Q6TGC4 694 aa12.72□□□□□ -0.37
C9orf3-203ENST00000375315 OLFML1Q6UWY5 402 aa12.72□□□□□ -0.37
C9orf3-203ENST00000375315 PPP4R3CPQ6ZMV5 832 aa12.72□□□□□ -0.37
C9orf3-203ENST00000375315 RFX8Q6ZV50 586 aa12.72□□□□□ -0.37
C9orf3-203ENST00000375315 TRABD2AQ86V40 505 aa12.72□□□□□ -0.37
C9orf3-203ENST00000375315 LRRC6Q86X45 466 aa12.72□□□□□ -0.37
C9orf3-203ENST00000375315 RHOT2Q8IXI1 618 aa12.72□□□□□ -0.37
C9orf3-203ENST00000375315 SNF8Q96H20 258 aa12.72□□□□□ -0.37
C9orf3-203ENST00000375315 FAM81BQ96LP2 452 aa12.72□□□□□ -0.37
C9orf3-203ENST00000375315 ZSWIM1Q9BR11 485 aa12.72□□□□□ -0.37
C9orf3-203ENST00000375315 TRABDQ9H4I3 376 aa12.72□□□□□ -0.37
C9orf3-203ENST00000375315 FAIMQ9NVQ4 179 aa12.72□□□□□ -0.37
C9orf3-203ENST00000375315 SENP1Q9P0U3 644 aa12.72□□□□□ -0.37
C9orf3-203ENST00000375315 CPA4Q9UI42 421 aa12.72□□□□□ -0.37
C9orf3-203ENST00000375315 TMEM98Q9Y2Y6 226 aa12.72□□□□□ -0.37
C9orf3-203ENST00000375315 IGSF9BQ9UPX0 1349 aa12.72□□□□□ -0.37
C9orf3-203ENST00000375315 TMEM247A6NEH6 219 aa12.72□□□□□ -0.37
C9orf3-203ENST00000375315 SOWAHBA6NEL2 793 aa12.72□□□□□ -0.37
C9orf3-203ENST00000375315 CXCL11O14625 94 aa12.72□□□□□ -0.37
C9orf3-203ENST00000375315 ZNF862O60290 1169 aa12.72□□□□□ -0.37
C9orf3-203ENST00000375315 UQCRBP14927 111 aa12.72□□□□□ -0.37
C9orf3-203ENST00000375315 CPA3P15088 417 aa12.72□□□□□ -0.37
C9orf3-203ENST00000375315 CA4P22748 312 aa12.72□□□□□ -0.37
C9orf3-203ENST00000375315 ZNF157P51786 506 aaPredicted RBP12.72□□□□□ -0.37
C9orf3-203ENST00000375315 GSTM4Q03013 218 aa12.72□□□□□ -0.37
C9orf3-203ENST00000375315 KRT17Q04695 432 aa12.72□□□□□ -0.37
C9orf3-203ENST00000375315 EPHA7Q15375 998 aa12.72□□□□□ -0.37
C9orf3-203ENST00000375315 STXBP2Q15833 593 aa12.72□□□□□ -0.37
C9orf3-203ENST00000375315 MTERF2Q49AM1 385 aa12.72□□□□□ -0.37
C9orf3-203ENST00000375315 MAP3K21Q5TCX8 1036 aa12.72□□□□□ -0.37
C9orf3-203ENST00000375315 DPY19L2P1Q6NXN4 242 aa12.72□□□□□ -0.37
C9orf3-203ENST00000375315 LRRC8BQ6P9F7 803 aa12.72□□□□□ -0.37
C9orf3-203ENST00000375315 TRIM50Q86XT4 487 aa12.72□□□□□ -0.37
C9orf3-203ENST00000375315 ALDH16A1Q8IZ83 802 aa12.72□□□□□ -0.37
C9orf3-203ENST00000375315 NUP93Q8N1F7 819 aa12.72□□□□□ -0.37
C9orf3-203ENST00000375315 ARL10Q8N8L6 244 aa12.72□□□□□ -0.37
C9orf3-203ENST00000375315 SLC30A5Q8TAD4 765 aa12.72□□□□□ -0.37
C9orf3-203ENST00000375315 FNDC8Q8TC99 324 aa12.72□□□□□ -0.37
C9orf3-203ENST00000375315 ZNF75CPQ92670 426 aaPredicted RBP12.72□□□□□ -0.37
C9orf3-203ENST00000375315 AGAP3Q96P47 875 aa12.72□□□□□ -0.37
C9orf3-203ENST00000375315 NACC1Q96RE7 527 aa12.72□□□□□ -0.37
C9orf3-203ENST00000375315 TRIM55Q9BYV6 548 aa12.72□□□□□ -0.37
C9orf3-203ENST00000375315 PCIF1Q9H4Z3 704 aa12.72□□□□□ -0.37
C9orf3-203ENST00000375315 SEPT9Q9UHD8 586 aaPredicted RBP12.72□□□□□ -0.37
C9orf3-203ENST00000375315 GSTTP1A0A1W2PQM5 241 aa12.71□□□□□ -0.37
C9orf3-203ENST00000375315 ARHGAP10A1A4S6 786 aa12.71□□□□□ -0.37
C9orf3-203ENST00000375315 PYGMP11217 842 aa12.71□□□□□ -0.37
C9orf3-203ENST00000375315 QARSP47897 775 aaKnown RBP12.71□□□□□ -0.37
C9orf3-203ENST00000375315 CHN2P52757 468 aa12.71□□□□□ -0.37
C9orf3-203ENST00000375315 JAM2P57087 298 aa12.71□□□□□ -0.37
C9orf3-203ENST00000375315 PDE1BQ01064 536 aa12.71□□□□□ -0.37
C9orf3-203ENST00000375315 PDSS2Q86YH6 399 aa12.71□□□□□ -0.37
C9orf3-203ENST00000375315 ZBED8Q8IZ13 594 aa12.71□□□□□ -0.37
C9orf3-203ENST00000375315 SCFD1Q8WVM8 642 aa12.71□□□□□ -0.37
C9orf3-203ENST00000375315 MAML1Q92585 1016 aa12.71□□□□□ -0.37
C9orf3-203ENST00000375315 PPP1R16BQ96T49 567 aa12.71□□□□□ -0.37
C9orf3-203ENST00000375315 GPAMQ9HCL2 828 aa12.71□□□□□ -0.37
C9orf3-203ENST00000375315 PDGFCQ9NRA1 345 aa12.71□□□□□ -0.37
C9orf3-203ENST00000375315 A0A0G2JND7 137 aa12.71□□□□□ -0.37
C9orf3-203ENST00000375315 VILLO15195 856 aa12.71□□□□□ -0.37
C9orf3-203ENST00000375315 MAGEB3O15480 346 aa12.71□□□□□ -0.37
C9orf3-203ENST00000375315 FKBP6O75344 327 aa12.71□□□□□ -0.37
C9orf3-203ENST00000375315 RARBP10826 455 aa12.71□□□□□ -0.37
C9orf3-203ENST00000375315 YWHABP31946 246 aaKnown RBP12.71□□□□□ -0.37
C9orf3-203ENST00000375315 GTF2H1P32780 548 aa12.71□□□□□ -0.37
C9orf3-203ENST00000375315 CYP2J2P51589 502 aa12.71□□□□□ -0.37
C9orf3-203ENST00000375315 EMP3P54852 163 aa12.71□□□□□ -0.37
C9orf3-203ENST00000375315 COG7P83436 770 aa12.71□□□□□ -0.37
C9orf3-203ENST00000375315 ADRM1Q16186 407 aa12.71□□□□□ -0.37
C9orf3-203ENST00000375315 EDRF1Q3B7T1 1238 aa12.71□□□□□ -0.37
C9orf3-203ENST00000375315 DCAF17Q5H9S7 520 aaPredicted RBP12.71□□□□□ -0.37
C9orf3-203ENST00000375315 C11orf63Q6NUN7 778 aa12.71□□□□□ -0.37
C9orf3-203ENST00000375315 FASTKD5Q7L8L6 764 aaKnown RBP12.71□□□□□ -0.37
C9orf3-203ENST00000375315 FRMD5Q7Z6J6 570 aa12.71□□□□□ -0.37
C9orf3-203ENST00000375315 SLC13A5Q86YT5 568 aaPredicted RBP12.71□□□□□ -0.37
C9orf3-203ENST00000375315 FAM178BQ8IXR5 827 aa12.71□□□□□ -0.37
C9orf3-203ENST00000375315 ZDHHC14Q8IZN3 488 aa12.71□□□□□ -0.37
C9orf3-203ENST00000375315 BRI3BPQ8WY22 251 aa12.71□□□□□ -0.37
C9orf3-203ENST00000375315 KRT35Q92764 455 aa12.71□□□□□ -0.37
C9orf3-203ENST00000375315 CEP170P1Q96L14 293 aa12.71□□□□□ -0.37
C9orf3-203ENST00000375315 MMP19Q99542 508 aa12.71□□□□□ -0.37
C9orf3-203ENST00000375315 USP29Q9HBJ7 922 aa12.71□□□□□ -0.37
C9orf3-203ENST00000375315 INIPQ9NRY2 104 aa12.71□□□□□ -0.37
C9orf3-203ENST00000375315 ANKRD62A6NC57 917 aa12.71□□□□□ -0.38
C9orf3-203ENST00000375315 DCAF8L1A6NGE4 600 aa12.71□□□□□ -0.38
C9orf3-203ENST00000375315 PGM3O95394 542 aa12.71□□□□□ -0.38
C9orf3-203ENST00000375315 P4HBP07237 508 aaKnown RBP12.71□□□□□ -0.38
C9orf3-203ENST00000375315 XRCC5P13010 732 aaKnown RBP12.71□□□□□ -0.38
C9orf3-203ENST00000375315 KRT15P19012 456 aa12.71□□□□□ -0.38
C9orf3-203ENST00000375315 NR2F2P24468 414 aa12.71□□□□□ -0.38
C9orf3-203ENST00000375315 ARFIP2P53365 341 aa12.71□□□□□ -0.38
C9orf3-203ENST00000375315 MAP7D1Q3KQU3 841 aa12.71□□□□□ -0.38
C9orf3-203ENST00000375315 CST9Q5W186 159 aa12.71□□□□□ -0.38
C9orf3-203ENST00000375315 GPAT2Q6NUI2 795 aa12.71□□□□□ -0.38
C9orf3-203ENST00000375315 KLHDC10Q6PID8 442 aa12.71□□□□□ -0.38
C9orf3-203ENST00000375315 RIPOR1Q6ZS17 1223 aa12.71□□□□□ -0.38
C9orf3-203ENST00000375315 PASD1Q8IV76 773 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms