RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 USP17L24Q0WX57 530 aa21.51■■□□□ 1.03
TMEFF1-201ENST00000374879 ZYXQ15942 572 aaKnown RBP21.51■■□□□ 1.03
TMEFF1-201ENST00000374879 NFIL3Q16649 462 aa21.51■■□□□ 1.03
TMEFF1-201ENST00000374879 GRAMD4Q6IC98 578 aa21.51■■□□□ 1.03
TMEFF1-201ENST00000374879 PPP1R18Q6NYC8 613 aa21.51■■□□□ 1.03
TMEFF1-201ENST00000374879 USP17L6PQ6QN14 398 aa21.51■■□□□ 1.03
TMEFF1-201ENST00000374879 PPM1KQ8N3J5 372 aa21.51■■□□□ 1.03
TMEFF1-201ENST00000374879 MRPS26Q9BYN8 205 aaKnown RBP21.51■■□□□ 1.03
TMEFF1-201ENST00000374879 SERPINB13Q9UIV8 391 aa21.51■■□□□ 1.03
TMEFF1-201ENST00000374879 LY75O60449 1722 aa21.51■■□□□ 1.03
TMEFF1-201ENST00000374879 EIF3DO15371 548 aaKnown RBP eCLIP21.51■■□□□ 1.03
TMEFF1-201ENST00000374879 SLC26A4O43511 780 aa21.51■■□□□ 1.03
TMEFF1-201ENST00000374879 ADCY3O60266 1144 aa21.51■■□□□ 1.03
TMEFF1-201ENST00000374879 SERPINB6P35237 376 aa21.51■■□□□ 1.03
TMEFF1-201ENST00000374879 ARSEP51690 589 aa21.51■■□□□ 1.03
TMEFF1-201ENST00000374879 EPHB1P54762 984 aa21.51■■□□□ 1.03
TMEFF1-201ENST00000374879 UBAP2LQ14157 1087 aaKnown RBP21.51■■□□□ 1.03
TMEFF1-201ENST00000374879 RALGPS1Q5JS13 557 aa21.51■■□□□ 1.03
TMEFF1-201ENST00000374879 ALDH16A1Q8IZ83 802 aa21.51■■□□□ 1.03
TMEFF1-201ENST00000374879 JDP2Q8WYK2 163 aa21.51■■□□□ 1.03
TMEFF1-201ENST00000374879 GFM2Q969S9 779 aaKnown RBP21.51■■□□□ 1.03
TMEFF1-201ENST00000374879 ZFRQ96KR1 1074 aaKnown RBP21.51■■□□□ 1.03
TMEFF1-201ENST00000374879 C1orf21Q9H246 121 aa21.51■■□□□ 1.03
TMEFF1-201ENST00000374879 PSTPIP2Q9H939 334 aa21.51■■□□□ 1.03
TMEFF1-201ENST00000374879 APPL1Q9UKG1 709 aa21.51■■□□□ 1.03
TMEFF1-201ENST00000374879 STRIP2Q9ULQ0 834 aa21.51■■□□□ 1.03
TMEFF1-201ENST00000374879 KANSL1LA0AUZ9 987 aa21.5■■□□□ 1.03
TMEFF1-201ENST00000374879 KITP10721 976 aa21.5■■□□□ 1.03
TMEFF1-201ENST00000374879 RAG1P15918 1043 aa21.5■■□□□ 1.03
TMEFF1-201ENST00000374879 CCR3P51677 355 aa21.5■■□□□ 1.03
TMEFF1-201ENST00000374879 PPP3CAQ08209 521 aa21.5■■□□□ 1.03
TMEFF1-201ENST00000374879 GK3PQ14409 553 aa21.5■■□□□ 1.03
TMEFF1-201ENST00000374879 KCTD1Q719H9 257 aa21.5■■□□□ 1.03
TMEFF1-201ENST00000374879 CENPUQ71F23 418 aa21.5■■□□□ 1.03
TMEFF1-201ENST00000374879 ZNF410Q86VK4 478 aa21.5■■□□□ 1.03
TMEFF1-201ENST00000374879 FAM71AQ8IYT1 594 aa21.5■■□□□ 1.03
TMEFF1-201ENST00000374879 ALKBH8Q96BT7 664 aaKnown RBP21.5■■□□□ 1.03
TMEFF1-201ENST00000374879 SOX13Q9UN79 622 aa21.5■■□□□ 1.03
TMEFF1-201ENST00000374879 FAF1Q9UNN5 650 aaPredicted RBP21.5■■□□□ 1.03
TMEFF1-201ENST00000374879 INPP5FQ9Y2H2 1132 aa21.5■■□□□ 1.03
TMEFF1-201ENST00000374879 FOCADQ5VW36 1801 aa21.5■■□□□ 1.03
TMEFF1-201ENST00000374879 DENND3A2RUS2 1198 aa21.5■■□□□ 1.03
TMEFF1-201ENST00000374879 DENRO43583 198 aaKnown RBP21.5■■□□□ 1.03
TMEFF1-201ENST00000374879 FAM13AO94988 1023 aa21.5■■□□□ 1.03
TMEFF1-201ENST00000374879 C6orf222P0C671 652 aaPredicted RBP21.5■■□□□ 1.03
TMEFF1-201ENST00000374879 GCLMP48507 274 aa21.5■■□□□ 1.03
TMEFF1-201ENST00000374879 ACAP1Q15027 740 aa21.5■■□□□ 1.03
TMEFF1-201ENST00000374879 IYDQ6PHW0 289 aa21.5■■□□□ 1.03
TMEFF1-201ENST00000374879 ARID3BQ8IVW6 561 aaPredicted RBP21.5■■□□□ 1.03
TMEFF1-201ENST00000374879 ARL10Q8N8L6 244 aa21.5■■□□□ 1.03
TMEFF1-201ENST00000374879 ZNF395Q9H8N7 513 aaPredicted RBP21.5■■□□□ 1.03
TMEFF1-201ENST00000374879 USP17L10C9JJH3 530 aa21.49■■□□□ 1.03
TMEFF1-201ENST00000374879 DNAJA2O60884 412 aa21.49■■□□□ 1.03
TMEFF1-201ENST00000374879 YY1P25490 414 aa21.49■■□□□ 1.03
TMEFF1-201ENST00000374879 VCPP55072 806 aaKnown RBP21.49■■□□□ 1.03
TMEFF1-201ENST00000374879 RINT1Q6NUQ1 792 aa21.49■■□□□ 1.03
TMEFF1-201ENST00000374879 PATL1Q86TB9 770 aaKnown RBP21.49■■□□□ 1.03
TMEFF1-201ENST00000374879 ERMNQ8TAM6 284 aa21.49■■□□□ 1.03
TMEFF1-201ENST00000374879 DCAKDQ8WVC6 231 aa21.49■■□□□ 1.03
TMEFF1-201ENST00000374879 CCDC124Q96CT7 223 aaKnown RBP21.49■■□□□ 1.03
TMEFF1-201ENST00000374879 PRPF18Q99633 342 aaKnown RBP21.49■■□□□ 1.03
TMEFF1-201ENST00000374879 USP21Q9UK80 565 aa21.49■■□□□ 1.03
TMEFF1-201ENST00000374879 DNPEPQ9ULA0 475 aa21.49■■□□□ 1.03
TMEFF1-201ENST00000374879 CD48P09326 243 aa21.49■■□□□ 1.03
TMEFF1-201ENST00000374879 ADRA2BP18089 450 aa21.49■■□□□ 1.03
TMEFF1-201ENST00000374879 MYBPC1Q00872 1141 aa21.49■■□□□ 1.03
TMEFF1-201ENST00000374879 GAD2Q05329 585 aa21.49■■□□□ 1.03
TMEFF1-201ENST00000374879 LLGL2Q6P1M3 1020 aa21.49■■□□□ 1.03
TMEFF1-201ENST00000374879 SERAC1Q96JX3 654 aa21.49■■□□□ 1.03
TMEFF1-201ENST00000374879 DHRS4Q9BTZ2 278 aa21.49■■□□□ 1.03
TMEFF1-201ENST00000374879 ANO3Q9BYT9 981 aa21.49■■□□□ 1.03
TMEFF1-201ENST00000374879 TMEM117Q9H0C3 514 aa21.49■■□□□ 1.03
TMEFF1-201ENST00000374879 CNTN3Q9P232 1028 aa21.49■■□□□ 1.03
TMEFF1-201ENST00000374879 MARCOQ9UEW3 520 aaPredicted RBP21.49■■□□□ 1.03
TMEFF1-201ENST00000374879 ATF5Q9Y2D1 282 aaPredicted RBP21.49■■□□□ 1.03
TMEFF1-201ENST00000374879 DTNAQ9Y4J8 743 aa21.49■■□□□ 1.03
TMEFF1-201ENST00000374879 CEPT1Q9Y6K0 416 aa21.49■■□□□ 1.03
TMEFF1-201ENST00000374879 ZBTB5O15062 677 aa21.48■■□□□ 1.03
TMEFF1-201ENST00000374879 MT-ND3P03897 115 aa21.48■■□□□ 1.03
TMEFF1-201ENST00000374879 COL6A2P12110 1019 aa21.48■■□□□ 1.03
TMEFF1-201ENST00000374879 GLRA2P23416 452 aa21.48■■□□□ 1.03
TMEFF1-201ENST00000374879 GJC1P36383 396 aa21.48■■□□□ 1.03
TMEFF1-201ENST00000374879 RABGAP1LQ5R372 815 aa21.48■■□□□ 1.03
TMEFF1-201ENST00000374879 SLFN12Q8IYM2 578 aa21.48■■□□□ 1.03
TMEFF1-201ENST00000374879 LIN28AQ9H9Z2 209 aaKnown RBP21.48■■□□□ 1.03
TMEFF1-201ENST00000374879 ZNF148Q9UQR1 794 aa21.48■■□□□ 1.03
TMEFF1-201ENST00000374879 EFR3BQ9Y2G0 817 aa21.48■■□□□ 1.03
TMEFF1-201ENST00000374879 CDH2P19022 906 aaPredicted RBP21.48■■□□□ 1.03
TMEFF1-201ENST00000374879 SHMT1P34896 483 aa21.48■■□□□ 1.03
TMEFF1-201ENST00000374879 MTM1Q13496 603 aa21.48■■□□□ 1.03
TMEFF1-201ENST00000374879 KRT81Q14533 505 aa21.48■■□□□ 1.03
TMEFF1-201ENST00000374879 PRR16Q569H4 304 aa21.48■■□□□ 1.03
TMEFF1-201ENST00000374879 C3orf62Q6ZUJ4 267 aa21.48■■□□□ 1.03
TMEFF1-201ENST00000374879 POU5F2Q8N7G0 328 aa21.48■■□□□ 1.03
TMEFF1-201ENST00000374879 KREMEN1Q96MU8 473 aa21.48■■□□□ 1.03
TMEFF1-201ENST00000374879 TUT1Q9H6E5 874 aaKnown RBP21.48■■□□□ 1.03
TMEFF1-201ENST00000374879 SSX2IPQ9Y2D8 614 aa21.48■■□□□ 1.03
TMEFF1-201ENST00000374879 RABGAP1Q9Y3P9 1069 aa21.48■■□□□ 1.03
TMEFF1-201ENST00000374879 AK5Q9Y6K8 562 aa21.48■■□□□ 1.03
TMEFF1-201ENST00000374879 SH3PXD2BA1X283 911 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms