RNA–Protein interactions for RNA: ENST00000374022.3

GJB1-202, Transcript of gap junction protein beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GJB1, Length 1,904 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GJB1-202ENST00000374022 TTC30AQ86WT1 665 aa13.57□□□□□ -0.24
GJB1-202ENST00000374022 SPATA2LQ8IUW3 424 aaPredicted RBP13.57□□□□□ -0.24
GJB1-202ENST00000374022 MRPL43Q8N983 215 aaKnown RBP13.57□□□□□ -0.24
GJB1-202ENST00000374022 MICAL1Q8TDZ2 1067 aa13.57□□□□□ -0.24
GJB1-202ENST00000374022 PGLYRP2Q96PD5 576 aa13.57□□□□□ -0.24
GJB1-202ENST00000374022 KCNF1Q9H3M0 494 aa13.57□□□□□ -0.24
GJB1-202ENST00000374022 KRT82Q9NSB4 513 aa13.57□□□□□ -0.24
GJB1-202ENST00000374022 ABI2Q9NYB9 513 aaPredicted RBP13.57□□□□□ -0.24
GJB1-202ENST00000374022 HESX1Q9UBX0 185 aa13.57□□□□□ -0.24
GJB1-202ENST00000374022 A0A087X0T9 212 aa13.56□□□□□ -0.24
GJB1-202ENST00000374022 MTMR11A4FU01 709 aa13.56□□□□□ -0.24
GJB1-202ENST00000374022 HIDE1A8MVS5 230 aa13.56□□□□□ -0.24
GJB1-202ENST00000374022 DDX3XO00571 662 aaKnown RBP eCLIP13.56□□□□□ -0.242e-7■□□□□ 10.6
GJB1-202ENST00000374022 AKR1B10O60218 316 aa13.56□□□□□ -0.24
GJB1-202ENST00000374022 LPXNO60711 386 aa13.56□□□□□ -0.24
GJB1-202ENST00000374022 FAM228BP0C875 321 aa13.56□□□□□ -0.24
GJB1-202ENST00000374022 FAM200BP0CF97 657 aa13.56□□□□□ -0.24
GJB1-202ENST00000374022 BCAT1P54687 386 aa13.56□□□□□ -0.24
GJB1-202ENST00000374022 GABPB1Q06547 395 aaPredicted RBP13.56□□□□□ -0.24
GJB1-202ENST00000374022 RAB33AQ14088 237 aa13.56□□□□□ -0.24
GJB1-202ENST00000374022 PKDCCQ504Y2 493 aa13.56□□□□□ -0.24
GJB1-202ENST00000374022 RNF19BQ6ZMZ0 732 aa13.56□□□□□ -0.24
GJB1-202ENST00000374022 PALB2Q86YC2 1186 aa13.56□□□□□ -0.24
GJB1-202ENST00000374022 CCDC170Q8IYT3 715 aa13.56□□□□□ -0.24
GJB1-202ENST00000374022 ANKRD52Q8NB46 1076 aa13.56□□□□□ -0.24
GJB1-202ENST00000374022 SMARCD1Q96GM5 515 aa13.56□□□□□ -0.24
GJB1-202ENST00000374022 FUBP3Q96I24 572 aaKnown RBP eCLIP13.56□□□□□ -0.24
GJB1-202ENST00000374022 ZNF830Q96NB3 372 aaPredicted RBP13.56□□□□□ -0.24
GJB1-202ENST00000374022 PCDHB18PQ96TA0 734 aa13.56□□□□□ -0.24
GJB1-202ENST00000374022 EMILIN2Q9BXX0 1053 aa13.56□□□□□ -0.24
GJB1-202ENST00000374022 RHOBTB2Q9BYZ6 727 aa13.56□□□□□ -0.24
GJB1-202ENST00000374022 ZNF576Q9H609 170 aa13.56□□□□□ -0.24
GJB1-202ENST00000374022 ADAMTS1Q9UHI8 967 aa13.56□□□□□ -0.24
GJB1-202ENST00000374022 CEP83Q9Y592 693 aa13.56□□□□□ -0.24
GJB1-202ENST00000374022 PCDHB5Q9Y5E4 795 aa13.56□□□□□ -0.24
GJB1-202ENST00000374022 CDH23Q9H251 3354 aa13.56□□□□□ -0.24
GJB1-202ENST00000374022 LSM8O95777 96 aaKnown RBP13.56□□□□□ -0.24
GJB1-202ENST00000374022 NPR3P17342 541 aa13.56□□□□□ -0.24
GJB1-202ENST00000374022 BDNFP23560 247 aa13.56□□□□□ -0.24
GJB1-202ENST00000374022 CYLC1P35663 651 aaPredicted RBP13.56□□□□□ -0.24
GJB1-202ENST00000374022 MTF1Q14872 753 aa13.56□□□□□ -0.24
GJB1-202ENST00000374022 SLC18A3Q16572 532 aa13.56□□□□□ -0.24
GJB1-202ENST00000374022 CFAP221Q4G0U5 840 aa13.56□□□□□ -0.24
GJB1-202ENST00000374022 TPGS2Q68CL5 300 aa13.56□□□□□ -0.24
GJB1-202ENST00000374022 RAD9BQ6WBX8 426 aa13.56□□□□□ -0.24
GJB1-202ENST00000374022 ATAD1Q8NBU5 361 aa13.56□□□□□ -0.24
GJB1-202ENST00000374022 SLC30A5Q8TAD4 765 aa13.56□□□□□ -0.24
GJB1-202ENST00000374022 UBA3Q8TBC4 463 aa13.56□□□□□ -0.24
GJB1-202ENST00000374022 SPPL2BQ8TCT7 592 aa13.56□□□□□ -0.24
GJB1-202ENST00000374022 C2orf15Q8WU43 125 aaKnown RBP13.56□□□□□ -0.24
GJB1-202ENST00000374022 ANKRD7Q92527 254 aa13.56□□□□□ -0.24
GJB1-202ENST00000374022 KLHL5Q96PQ7 755 aa13.56□□□□□ -0.24
GJB1-202ENST00000374022 DUSP16Q9BY84 665 aa13.56□□□□□ -0.24
GJB1-202ENST00000374022 LHX5Q9H2C1 402 aa13.56□□□□□ -0.24
GJB1-202ENST00000374022 ARHGAP6O43182 974 aa13.55□□□□□ -0.24
GJB1-202ENST00000374022 AP1G2O75843 785 aa13.55□□□□□ -0.24
GJB1-202ENST00000374022 ABLIM3O94929 683 aa13.55□□□□□ -0.24
GJB1-202ENST00000374022 VNN2O95498 520 aa13.55□□□□□ -0.24
GJB1-202ENST00000374022 CYP1A1P04798 512 aaPredicted RBP13.55□□□□□ -0.24
GJB1-202ENST00000374022 ADH1AP07327 375 aa13.55□□□□□ -0.24
GJB1-202ENST00000374022 CDH5P33151 784 aaPredicted RBP13.55□□□□□ -0.24
GJB1-202ENST00000374022 NOMO3P69849 1222 aa13.55□□□□□ -0.24
GJB1-202ENST00000374022 CBX1P83916 185 aa13.55□□□□□ -0.24
GJB1-202ENST00000374022 GFPT1Q06210 699 aaPredicted RBP13.55□□□□□ -0.24
GJB1-202ENST00000374022 ADCY1Q08828 1119 aa13.55□□□□□ -0.24
GJB1-202ENST00000374022 BST2Q10589 180 aaKnown RBP13.55□□□□□ -0.24
GJB1-202ENST00000374022 CLEC16AQ2KHT3 1053 aa13.55□□□□□ -0.24
GJB1-202ENST00000374022 TMEM35BQ8NCS4 154 aa13.55□□□□□ -0.24
GJB1-202ENST00000374022 C1orf131Q8NDD1 294 aaKnown RBP13.55□□□□□ -0.24
GJB1-202ENST00000374022 ZNF461Q8TAF7 563 aa13.55□□□□□ -0.24
GJB1-202ENST00000374022 SECISBP2LQ93073 1101 aaKnown RBP13.55□□□□□ -0.24
GJB1-202ENST00000374022 ABCB6Q9NP58 842 aa13.55□□□□□ -0.24
GJB1-202ENST00000374022 AFF4Q9UHB7 1163 aaKnown RBP13.55□□□□□ -0.24
GJB1-202ENST00000374022 EPN1Q9Y6I3 576 aaPredicted RBP13.55□□□□□ -0.24
GJB1-202ENST00000374022 TMEM265A0A087WTH1 108 aa13.54□□□□□ -0.24
GJB1-202ENST00000374022 RFXAPO00287 272 aa13.54□□□□□ -0.24
GJB1-202ENST00000374022 NDUFA10O95299 355 aa13.54□□□□□ -0.24
GJB1-202ENST00000374022 SETSIPP0DME0 302 aa13.54□□□□□ -0.24
GJB1-202ENST00000374022 UNGP13051 313 aaPredicted RBP13.54□□□□□ -0.24
GJB1-202ENST00000374022 CYP2F1P24903 491 aa13.54□□□□□ -0.24
GJB1-202ENST00000374022 GPD2P43304 727 aa13.54□□□□□ -0.24
GJB1-202ENST00000374022 CACNA2D1P54289 1103 aa13.54□□□□□ -0.24
GJB1-202ENST00000374022 SLC8A3P57103 927 aa13.54□□□□□ -0.24
GJB1-202ENST00000374022 FAM193AP78312 1265 aa13.54□□□□□ -0.24
GJB1-202ENST00000374022 NAA35Q5VZE5 725 aa13.54□□□□□ -0.24
GJB1-202ENST00000374022 CLEC20AQ6ZU45 233 aa13.54□□□□□ -0.24
GJB1-202ENST00000374022 WDTC1Q8N5D0 677 aa13.54□□□□□ -0.24
GJB1-202ENST00000374022 TTC9BQ8N6N2 239 aa13.54□□□□□ -0.24
GJB1-202ENST00000374022 TMEM30AQ9NV96 361 aa13.54□□□□□ -0.24
GJB1-202ENST00000374022 NAGPAQ9UK23 515 aa13.54□□□□□ -0.24
GJB1-202ENST00000374022 FAM170AA1A519 330 aa13.54□□□□□ -0.24
GJB1-202ENST00000374022 TMCO5BA8MYB1 307 aa13.54□□□□□ -0.24
GJB1-202ENST00000374022 ATF2P15336 505 aa13.54□□□□□ -0.24
GJB1-202ENST00000374022 KLRC2P26717 231 aa13.54□□□□□ -0.24
GJB1-202ENST00000374022 MAGEA11P43364 429 aa13.54□□□□□ -0.24
GJB1-202ENST00000374022 MAP3K7CLP57077 242 aa13.54□□□□□ -0.24
GJB1-202ENST00000374022 CENPCQ03188 943 aa13.54□□□□□ -0.24
GJB1-202ENST00000374022 DUSP4Q13115 394 aa13.54□□□□□ -0.24
GJB1-202ENST00000374022 ALKBH5Q6P6C2 394 aaKnown RBP13.54□□□□□ -0.24
GJB1-202ENST00000374022 VSTM1Q6UX27 236 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms