RNA–Protein interactions for RNA: ENST00000373243.6

NCDN-202, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-202ENST00000373243 ISLR2Q6UXK2 745 aa12.65□□□□□ -0.39
NCDN-202ENST00000373243 SPATA31D4Q6ZUB0 917 aa12.65□□□□□ -0.39
NCDN-202ENST00000373243 SESTD1Q86VW0 696 aa12.65□□□□□ -0.39
NCDN-202ENST00000373243 LRRC6Q86X45 466 aa12.65□□□□□ -0.39
NCDN-202ENST00000373243 ECHDC2Q86YB7 292 aa12.65□□□□□ -0.39
NCDN-202ENST00000373243 ZDHHC14Q8IZN3 488 aa12.65□□□□□ -0.39
NCDN-202ENST00000373243 PLEKHO2Q8TD55 490 aa12.65□□□□□ -0.39
NCDN-202ENST00000373243 TCP10LQ8TDR4 215 aa12.65□□□□□ -0.39
NCDN-202ENST00000373243 PPP1R36Q96LQ0 422 aa12.65□□□□□ -0.39
NCDN-202ENST00000373243 ACAP3Q96P50 834 aa12.65□□□□□ -0.39
NCDN-202ENST00000373243 ADPGKQ9BRR6 497 aa12.65□□□□□ -0.39
NCDN-202ENST00000373243 THTPAQ9BU02 230 aa12.65□□□□□ -0.39
NCDN-202ENST00000373243 LRRC19Q9H756 370 aa12.65□□□□□ -0.39
NCDN-202ENST00000373243 SMG5Q9UPR3 1016 aaKnown RBP12.65□□□□□ -0.39
NCDN-202ENST00000373243 TMA7Q9Y2S6 64 aaKnown RBP12.65□□□□□ -0.39
NCDN-202ENST00000373243 DOT1LQ8TEK3 1739 aa12.64□□□□□ -0.39
NCDN-202ENST00000373243 HOXA10P31260 410 aaPredicted RBP12.64□□□□□ -0.39
NCDN-202ENST00000373243 ADARP55265 1226 aaKnown RBP12.64□□□□□ -0.39
NCDN-202ENST00000373243 SPATA24Q86W54 205 aa12.64□□□□□ -0.39
NCDN-202ENST00000373243 ARID3BQ8IVW6 561 aaPredicted RBP12.64□□□□□ -0.39
NCDN-202ENST00000373243 NME8Q8N427 588 aa12.64□□□□□ -0.39
NCDN-202ENST00000373243 RNF149Q8NC42 400 aa12.64□□□□□ -0.39
NCDN-202ENST00000373243 CCNYQ8ND76 341 aa12.64□□□□□ -0.39
NCDN-202ENST00000373243 NSUN6Q8TEA1 469 aaKnown RBP12.64□□□□□ -0.39
NCDN-202ENST00000373243 PRPF31Q8WWY3 499 aaKnown RBP12.64□□□□□ -0.39
NCDN-202ENST00000373243 ZMAT2Q96NC0 199 aaKnown RBP12.64□□□□□ -0.39
NCDN-202ENST00000373243 ANKRD27Q96NW4 1050 aa12.64□□□□□ -0.39
NCDN-202ENST00000373243 MTMR12Q9C0I1 747 aa12.64□□□□□ -0.39
NCDN-202ENST00000373243 MIS12Q9H081 205 aa12.64□□□□□ -0.39
NCDN-202ENST00000373243 IFT122Q9HBG6 1241 aa12.64□□□□□ -0.39
NCDN-202ENST00000373243 NRBP2Q9NSY0 501 aa12.64□□□□□ -0.39
NCDN-202ENST00000373243 ITGB4P16144 1822 aa12.64□□□□□ -0.39
NCDN-202ENST00000373243 ZMYM2Q9UBW7 1377 aa12.64□□□□□ -0.39
NCDN-202ENST00000373243 CAPN9O14815 690 aa12.64□□□□□ -0.39
NCDN-202ENST00000373243 FSCN2O14926 492 aa12.64□□□□□ -0.39
NCDN-202ENST00000373243 VHLP40337 213 aa12.64□□□□□ -0.39
NCDN-202ENST00000373243 CENPCQ03188 943 aa12.64□□□□□ -0.39
NCDN-202ENST00000373243 KCTD21Q4G0X4 260 aa12.64□□□□□ -0.39
NCDN-202ENST00000373243 C14orf80Q86SX3 495 aa12.64□□□□□ -0.39
NCDN-202ENST00000373243 NUDCD3Q8IVD9 361 aa12.64□□□□□ -0.39
NCDN-202ENST00000373243 SULF1Q8IWU6 871 aa12.64□□□□□ -0.39
NCDN-202ENST00000373243 FAM151AQ8WW52 585 aa12.64□□□□□ -0.39
NCDN-202ENST00000373243 PAFAH2Q99487 392 aa12.64□□□□□ -0.39
NCDN-202ENST00000373243 MANSC1Q9H8J5 431 aa12.64□□□□□ -0.39
NCDN-202ENST00000373243 SMYD2Q9NRG4 433 aa12.64□□□□□ -0.39
NCDN-202ENST00000373243 TUBGCP4Q9UGJ1 667 aa12.64□□□□□ -0.39
NCDN-202ENST00000373243 MYH3P11055 1940 aa12.64□□□□□ -0.39
NCDN-202ENST00000373243 C2orf71A6NGG8 1288 aa12.64□□□□□ -0.39
NCDN-202ENST00000373243 M0QYV0 167 aa12.64□□□□□ -0.39
NCDN-202ENST00000373243 CYP1A2P05177 515 aa12.64□□□□□ -0.39
NCDN-202ENST00000373243 ICAM1P05362 532 aa12.64□□□□□ -0.39
NCDN-202ENST00000373243 NFKBIAP25963 317 aa12.64□□□□□ -0.39
NCDN-202ENST00000373243 THOC5Q13769 683 aaKnown RBP12.64□□□□□ -0.39
NCDN-202ENST00000373243 MPP2Q14168 576 aa12.64□□□□□ -0.39
NCDN-202ENST00000373243 EMC2Q15006 297 aa12.64□□□□□ -0.39
NCDN-202ENST00000373243 EFTUD2Q15029 972 aaKnown RBP eCLIP12.64□□□□□ -0.39
NCDN-202ENST00000373243 ZNF667Q5HYK9 610 aa12.64□□□□□ -0.39
NCDN-202ENST00000373243 NXNQ6DKJ4 435 aa12.64□□□□□ -0.39
NCDN-202ENST00000373243 PIGWQ7Z7B1 504 aa12.64□□□□□ -0.39
NCDN-202ENST00000373243 SLC25A41Q8N5S1 370 aa12.64□□□□□ -0.39
NCDN-202ENST00000373243 TMCO5AQ8N6Q1 288 aa12.64□□□□□ -0.39
NCDN-202ENST00000373243 UBA3Q8TBC4 463 aa12.64□□□□□ -0.39
NCDN-202ENST00000373243 ZNF606Q8WXB4 792 aa12.64□□□□□ -0.39
NCDN-202ENST00000373243 TBC1D10AQ9BXI6 508 aa12.64□□□□□ -0.39
NCDN-202ENST00000373243 KIAA1586Q9HCI6 787 aa12.64□□□□□ -0.39
NCDN-202ENST00000373243 ZNF302Q9NR11 478 aa12.64□□□□□ -0.39
NCDN-202ENST00000373243 PDP2Q9P2J9 529 aa12.64□□□□□ -0.39
NCDN-202ENST00000373243 CFHP08603 1231 aa12.63□□□□□ -0.39
NCDN-202ENST00000373243 BGNP21810 368 aa12.63□□□□□ -0.39
NCDN-202ENST00000373243 ATXN3P54252 364 aaPredicted RBP12.63□□□□□ -0.39
NCDN-202ENST00000373243 BMPR2Q13873 1038 aa12.63□□□□□ -0.39
NCDN-202ENST00000373243 ZNF568Q3ZCX4 644 aa12.63□□□□□ -0.39
NCDN-202ENST00000373243 EMC10Q5UCC4 262 aa12.63□□□□□ -0.39
NCDN-202ENST00000373243 SLFN12LQ6IEE8 588 aa12.63□□□□□ -0.39
NCDN-202ENST00000373243 VSTM1Q6UX27 236 aa12.63□□□□□ -0.39
NCDN-202ENST00000373243 SCUBE1Q8IWY4 988 aa12.63□□□□□ -0.39
NCDN-202ENST00000373243 LENG1Q96BZ8 264 aaPredicted RBP12.63□□□□□ -0.39
NCDN-202ENST00000373243 ANKRD36BP1Q96IX9 119 aa12.63□□□□□ -0.39
NCDN-202ENST00000373243 PDCD2LQ9BRP1 358 aa12.63□□□□□ -0.39
NCDN-202ENST00000373243 IDI2Q9BXS1 227 aa12.63□□□□□ -0.39
NCDN-202ENST00000373243 ARHGEF3Q9NR81 526 aa12.63□□□□□ -0.39
NCDN-202ENST00000373243 DMAC2Q9NW81 257 aa12.63□□□□□ -0.39
NCDN-202ENST00000373243 COL20A1Q9P218 1284 aa12.63□□□□□ -0.39
NCDN-202ENST00000373243 WDR37Q9Y2I8 494 aa12.63□□□□□ -0.39
NCDN-202ENST00000373243 LOC100653049A0A140TA62 436 aa12.63□□□□□ -0.39
NCDN-202ENST00000373243 PIK3CDO00329 1044 aa12.63□□□□□ -0.39
NCDN-202ENST00000373243 KCNN4O15554 427 aa12.63□□□□□ -0.39
NCDN-202ENST00000373243 KRT34O76011 436 aa12.63□□□□□ -0.39
NCDN-202ENST00000373243 KRT37O76014 449 aa12.63□□□□□ -0.39
NCDN-202ENST00000373243 PAEPP09466 180 aa12.63□□□□□ -0.39
NCDN-202ENST00000373243 FOXN2P32314 431 aa12.63□□□□□ -0.39
NCDN-202ENST00000373243 CAP2P40123 477 aa12.63□□□□□ -0.39
NCDN-202ENST00000373243 GEMIN4P57678 1058 aaKnown RBP12.63□□□□□ -0.39
NCDN-202ENST00000373243 MYL6P60660 151 aa12.63□□□□□ -0.39
NCDN-202ENST00000373243 BNIP1Q12981 228 aa12.63□□□□□ -0.39
NCDN-202ENST00000373243 PTK6Q13882 451 aa12.63□□□□□ -0.39
NCDN-202ENST00000373243 MTFR1Q15390 333 aa12.63□□□□□ -0.39
NCDN-202ENST00000373243 KLHL38Q2WGJ6 581 aa12.63□□□□□ -0.39
NCDN-202ENST00000373243 GRAMD1BQ3KR37 738 aa12.63□□□□□ -0.39
NCDN-202ENST00000373243 PABPC1LQ4VXU2 614 aaKnown RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms