RNA–Protein interactions for RNA: ENST00000373233.7

CHD6-203, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD6, Length 10,818 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-203ENST00000373233 GINS2Q9Y248 185 aa6.86□□□□□ -1.31
CHD6-203ENST00000373233 ATAD5Q96QE3 1844 aa6.86□□□□□ -1.31
CHD6-203ENST00000373233 TMEM120BA0PK00 339 aa6.86□□□□□ -1.31
CHD6-203ENST00000373233 RAD51BO15315 384 aa6.86□□□□□ -1.31
CHD6-203ENST00000373233 GHRP10912 638 aa6.86□□□□□ -1.31
CHD6-203ENST00000373233 BRAFP15056 766 aa6.86□□□□□ -1.31
CHD6-203ENST00000373233 KRT17Q04695 432 aa6.86□□□□□ -1.31
CHD6-203ENST00000373233 WASHC2DQ5SRD0 308 aa6.86□□□□□ -1.31
CHD6-203ENST00000373233 XRRA1Q6P2D8 792 aa6.86□□□□□ -1.31
CHD6-203ENST00000373233 SCAIQ8N9R8 606 aa6.86□□□□□ -1.31
CHD6-203ENST00000373233 LRRC1Q9BTT6 524 aa6.86□□□□□ -1.31
CHD6-203ENST00000373233 WDR70Q9NW82 654 aa6.86□□□□□ -1.31
CHD6-203ENST00000373233 ATP6V1C1P21283 382 aa6.86□□□□□ -1.31
CHD6-203ENST00000373233 CHN2P52757 468 aa6.86□□□□□ -1.31
CHD6-203ENST00000373233 WLSQ5T9L3 541 aa6.86□□□□□ -1.31
CHD6-203ENST00000373233 CCSAPQ6IQ19 270 aaPredicted RBP6.86□□□□□ -1.31
CHD6-203ENST00000373233 GUF1Q8N442 669 aaKnown RBP6.86□□□□□ -1.31
CHD6-203ENST00000373233 C19orf60Q96EN9 201 aa6.86□□□□□ -1.31
CHD6-203ENST00000373233 C12orf4Q9NQ89 552 aa6.86□□□□□ -1.31
CHD6-203ENST00000373233 SENP1Q9P0U3 644 aa6.86□□□□□ -1.31
CHD6-203ENST00000373233 PLCL2Q9UPR0 1127 aa6.86□□□□□ -1.31
CHD6-203ENST00000373233 ZNF541Q9H0D2 1346 aa6.86□□□□□ -1.31
CHD6-203ENST00000373233 RBM47A0AV96 593 aaKnown RBP6.86□□□□□ -1.31
CHD6-203ENST00000373233 SGK1O00141 431 aa6.86□□□□□ -1.31
CHD6-203ENST00000373233 DDX5P17844 614 aaKnown RBP6.86□□□□□ -1.31
CHD6-203ENST00000373233 GSCP56915 257 aaPredicted RBP6.86□□□□□ -1.31
CHD6-203ENST00000373233 NLRP11P59045 1033 aaKnown RBP6.86□□□□□ -1.31
CHD6-203ENST00000373233 MDH1BQ5I0G3 518 aa6.86□□□□□ -1.31
CHD6-203ENST00000373233 ZNF618Q5T7W0 954 aa6.86□□□□□ -1.31
CHD6-203ENST00000373233 C16orf89Q6UX73 402 aa6.86□□□□□ -1.31
CHD6-203ENST00000373233 GALNT6Q8NCL4 622 aa6.86□□□□□ -1.31
CHD6-203ENST00000373233 HPS1Q92902 700 aa6.86□□□□□ -1.31
CHD6-203ENST00000373233 KCNK16Q96T55 309 aa6.86□□□□□ -1.31
CHD6-203ENST00000373233 DDX47Q9H0S4 455 aaKnown RBP6.86□□□□□ -1.31
CHD6-203ENST00000373233 MATN2O00339 956 aa6.85□□□□□ -1.31
CHD6-203ENST00000373233 APOL1O14791 398 aa6.85□□□□□ -1.31
CHD6-203ENST00000373233 SLC16A3O15427 465 aaKnown RBP6.85□□□□□ -1.31
CHD6-203ENST00000373233 GRB10Q13322 594 aa6.85□□□□□ -1.31
CHD6-203ENST00000373233 KNOP1Q1ED39 458 aaKnown RBP6.85□□□□□ -1.31
CHD6-203ENST00000373233 TATDN1Q6P1N9 297 aa6.85□□□□□ -1.31
CHD6-203ENST00000373233 RAPH1Q70E73 1250 aa6.85□□□□□ -1.31
CHD6-203ENST00000373233 IGKV6D-41A0A0C4DH26 115 aa6.85□□□□□ -1.31
CHD6-203ENST00000373233 A0A0G2JPF8 293 aa6.85□□□□□ -1.31
CHD6-203ENST00000373233 HNRNPCL3B7ZW38 293 aa6.85□□□□□ -1.31
CHD6-203ENST00000373233 AKAP10O43572 662 aa6.85□□□□□ -1.31
CHD6-203ENST00000373233 RHOBTB3O94955 611 aa6.85□□□□□ -1.31
CHD6-203ENST00000373233 HNRNPCL4P0DMR1 293 aa6.85□□□□□ -1.31
CHD6-203ENST00000373233 ARL4CP56559 192 aa6.85□□□□□ -1.31
CHD6-203ENST00000373233 ITGADQ13349 1161 aa6.85□□□□□ -1.31
CHD6-203ENST00000373233 AGAP11Q8TF27 550 aa6.85□□□□□ -1.31
CHD6-203ENST00000373233 THTPAQ9BU02 230 aa6.85□□□□□ -1.31
CHD6-203ENST00000373233 C1orf50Q9BV19 199 aa6.85□□□□□ -1.31
CHD6-203ENST00000373233 CEP44Q9C0F1 390 aa6.85□□□□□ -1.31
CHD6-203ENST00000373233 FIS1Q9Y3D6 152 aa6.85□□□□□ -1.31
CHD6-203ENST00000373233 SMCHD1A6NHR9 2005 aa6.85□□□□□ -1.31
CHD6-203ENST00000373233 C1orf232A0A0U1RR37 186 aa6.85□□□□□ -1.31
CHD6-203ENST00000373233 ADCY6O43306 1168 aa6.85□□□□□ -1.31
CHD6-203ENST00000373233 CHRM1P11229 460 aaPredicted RBP6.85□□□□□ -1.31
CHD6-203ENST00000373233 EPHX2P34913 555 aa6.85□□□□□ -1.31
CHD6-203ENST00000373233 NAA20P61599 178 aa6.85□□□□□ -1.31
CHD6-203ENST00000373233 DMC1Q14565 340 aa6.85□□□□□ -1.31
CHD6-203ENST00000373233 RAB44Q7Z6P3 723 aaPredicted RBP6.85□□□□□ -1.31
CHD6-203ENST00000373233 OR8H2Q8N162 312 aa6.85□□□□□ -1.31
CHD6-203ENST00000373233 PDIK1LQ8N165 341 aa6.85□□□□□ -1.31
CHD6-203ENST00000373233 CHST13Q8NET6 341 aa6.85□□□□□ -1.31
CHD6-203ENST00000373233 SEPT1Q8WYJ6 367 aa6.85□□□□□ -1.31
CHD6-203ENST00000373233 CCDC127Q96BQ5 260 aa6.85□□□□□ -1.31
CHD6-203ENST00000373233 RUSC1Q9BVN2 902 aa6.85□□□□□ -1.31
CHD6-203ENST00000373233 PCIF1Q9H4Z3 704 aa6.85□□□□□ -1.31
CHD6-203ENST00000373233 AASDHPPTQ9NRN7 309 aa6.85□□□□□ -1.31
CHD6-203ENST00000373233 LIMA1Q9UHB6 759 aaKnown RBP6.85□□□□□ -1.31
CHD6-203ENST00000373233 ABT1Q9ULW3 272 aaKnown RBP6.85□□□□□ -1.31
CHD6-203ENST00000373233 SNX12Q9UMY4 172 aa6.85□□□□□ -1.31
CHD6-203ENST00000373233 MTO1Q9Y2Z2 717 aaKnown RBP6.85□□□□□ -1.31
CHD6-203ENST00000373233 KIAA1217Q5T5P2 1943 aa6.85□□□□□ -1.31
CHD6-203ENST00000373233 ITIH6Q6UXX5 1313 aa6.85□□□□□ -1.31
CHD6-203ENST00000373233 YWHAEP62258 255 aaKnown RBP6.85□□□□□ -1.31
CHD6-203ENST00000373233 PPP1R2P3Q6NXS1 205 aa6.85□□□□□ -1.31
CHD6-203ENST00000373233 LRRC34Q8IZ02 419 aa6.85□□□□□ -1.31
CHD6-203ENST00000373233 GALNT15Q8N3T1 639 aa6.85□□□□□ -1.31
CHD6-203ENST00000373233 MMGT1Q8N4V1 131 aa6.85□□□□□ -1.31
CHD6-203ENST00000373233 TINF2Q9BSI4 451 aa6.85□□□□□ -1.31
CHD6-203ENST00000373233 TRPV5Q9NQA5 729 aa6.85□□□□□ -1.31
CHD6-203ENST00000373233 GPRC5DQ9NZD1 345 aa6.85□□□□□ -1.31
CHD6-203ENST00000373233 CCDC59Q9P031 241 aaKnown RBP6.85□□□□□ -1.31
CHD6-203ENST00000373233 RSL24D1Q9UHA3 163 aaKnown RBP6.85□□□□□ -1.31
CHD6-203ENST00000373233 CACNA1CQ13936 2221 aa6.85□□□□□ -1.31
CHD6-203ENST00000373233 ALOX5P09917 674 aa6.85□□□□□ -1.31
CHD6-203ENST00000373233 ZNF806P0C7X5 589 aa6.85□□□□□ -1.31
CHD6-203ENST00000373233 CALB2P22676 271 aa6.85□□□□□ -1.31
CHD6-203ENST00000373233 C16orf62Q7Z3J2 963 aa6.85□□□□□ -1.31
CHD6-203ENST00000373233 ENKURQ8TC29 256 aa6.85□□□□□ -1.31
CHD6-203ENST00000373233 LRRC20Q8TCA0 184 aa6.85□□□□□ -1.31
CHD6-203ENST00000373233 SCG3Q8WXD2 468 aaKnown RBP6.85□□□□□ -1.31
CHD6-203ENST00000373233 TNFRSF25Q93038 417 aa6.85□□□□□ -1.31
CHD6-203ENST00000373233 TSSK1BQ9BXA7 367 aa6.85□□□□□ -1.31
CHD6-203ENST00000373233 KCND2Q9NZV8 630 aa6.85□□□□□ -1.31
CHD6-203ENST00000373233 SLC16A4O15374 487 aa6.85□□□□□ -1.31
CHD6-203ENST00000373233 P4HBP07237 508 aaKnown RBP6.85□□□□□ -1.31
CHD6-203ENST00000373233 ACAP1Q15027 740 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms