RNA–Protein interactions for RNA: ENST00000373006.5

USP49-201, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 1 (best) BASIC

Gene USP49, Length 3,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-201ENST00000373006 FARP1Q9Y4F1 1045 aaPredicted RBP14.34□□□□□ -0.11
USP49-201ENST00000373006 TMEM191CA6NGB0 347 aa14.34□□□□□ -0.11
USP49-201ENST00000373006 FAM155BO75949 473 aa14.34□□□□□ -0.11
USP49-201ENST00000373006 TMEM63AO94886 807 aa14.34□□□□□ -0.11
USP49-201ENST00000373006 VNN1O95497 513 aa14.34□□□□□ -0.11
USP49-201ENST00000373006 APBA3O96018 575 aa14.34□□□□□ -0.11
USP49-201ENST00000373006 TMEM191BP0C7N4 346 aa14.34□□□□□ -0.11
USP49-201ENST00000373006 NLRP11P59045 1033 aaKnown RBP14.34□□□□□ -0.11
USP49-201ENST00000373006 BASP1P80723 227 aaKnown RBP14.34□□□□□ -0.11
USP49-201ENST00000373006 PTK7Q13308 1070 aa14.34□□□□□ -0.11
USP49-201ENST00000373006 CUL2Q13617 745 aa14.34□□□□□ -0.11
USP49-201ENST00000373006 LRRC36Q1X8D7 754 aa14.34□□□□□ -0.11
USP49-201ENST00000373006 SEZ6Q53EL9 994 aa14.34□□□□□ -0.11
USP49-201ENST00000373006 ZNF831Q5JPB2 1677 aa14.34□□□□□ -0.11
USP49-201ENST00000373006 DRICH1Q6PGQ1 229 aaPredicted RBP14.34□□□□□ -0.11
USP49-201ENST00000373006 PPIL6Q8IXY8 311 aa14.34□□□□□ -0.11
USP49-201ENST00000373006 CFAP61Q8NHU2 1237 aa14.34□□□□□ -0.11
USP49-201ENST00000373006 SNRNP27Q8WVK2 155 aaKnown RBP14.34□□□□□ -0.11
USP49-201ENST00000373006 THTPAQ9BU02 230 aa14.34□□□□□ -0.11
USP49-201ENST00000373006 SSU72Q9NP77 194 aaKnown RBP14.34□□□□□ -0.11
USP49-201ENST00000373006 ARHGEF4Q9NR80 690 aa14.34□□□□□ -0.11
USP49-201ENST00000373006 ITGAVP06756 1048 aa14.33□□□□□ -0.12
USP49-201ENST00000373006 RPL22P35268 128 aaKnown RBP14.33□□□□□ -0.12
USP49-201ENST00000373006 CDKN2BP42772 138 aa14.33□□□□□ -0.12
USP49-201ENST00000373006 CYP4A22Q5TCH4 519 aa14.33□□□□□ -0.12
USP49-201ENST00000373006 CDHR3Q6ZTQ4 885 aa14.33□□□□□ -0.12
USP49-201ENST00000373006 PODNQ7Z5L7 613 aa14.33□□□□□ -0.12
USP49-201ENST00000373006 PHF13Q86YI8 300 aaPredicted RBP14.33□□□□□ -0.12
USP49-201ENST00000373006 C4orf19Q8IY42 314 aa14.33□□□□□ -0.12
USP49-201ENST00000373006 KLHL23Q8NBE8 558 aa14.33□□□□□ -0.12
USP49-201ENST00000373006 RBM15BQ8NDT2 890 aaKnown RBP14.33□□□□□ -0.12
USP49-201ENST00000373006 FAM81AQ8TBF8 368 aa14.33□□□□□ -0.12
USP49-201ENST00000373006 PPARGC1AQ9UBK2 798 aaKnown RBP14.33□□□□□ -0.12
USP49-201ENST00000373006 XPO7Q9UIA9 1087 aaKnown RBP14.33□□□□□ -0.12
USP49-201ENST00000373006 SNCAIPQ9Y6H5 919 aa14.33□□□□□ -0.12
USP49-201ENST00000373006 IKBKGQ9Y6K9 419 aa14.33□□□□□ -0.12
USP49-201ENST00000373006 CCDC195A0A1B0GUA6 201 aa14.33□□□□□ -0.12
USP49-201ENST00000373006 TPP2P29144 1249 aaPredicted RBP14.33□□□□□ -0.12
USP49-201ENST00000373006 MTMR2Q13614 643 aa14.33□□□□□ -0.12
USP49-201ENST00000373006 KLHL38Q2WGJ6 581 aa14.33□□□□□ -0.12
USP49-201ENST00000373006 KBTBD12Q3ZCT8 623 aa14.33□□□□□ -0.12
USP49-201ENST00000373006 ZACNQ401N2 412 aa14.33□□□□□ -0.12
USP49-201ENST00000373006 C15orf39Q6ZRI6 1047 aa14.33□□□□□ -0.12
USP49-201ENST00000373006 APLFQ8IW19 511 aaPredicted RBP14.33□□□□□ -0.12
USP49-201ENST00000373006 ZNF606Q8WXB4 792 aa14.33□□□□□ -0.12
USP49-201ENST00000373006 RSAD2Q8WXG1 361 aa14.33□□□□□ -0.12
USP49-201ENST00000373006 TUBGCP5Q96RT8 1024 aa14.33□□□□□ -0.12
USP49-201ENST00000373006 ZNF212Q9UDV6 495 aa14.33□□□□□ -0.12
USP49-201ENST00000373006 ZNRF3Q9ULT6 936 aa14.33□□□□□ -0.12
USP49-201ENST00000373006 NUB1Q9Y5A7 615 aa14.33□□□□□ -0.12
USP49-201ENST00000373006 BTAF1O14981 1849 aa14.33□□□□□ -0.12
USP49-201ENST00000373006 TESPA1A2RU30 521 aaPredicted RBP14.32□□□□□ -0.12
USP49-201ENST00000373006 CST8O60676 142 aa14.32□□□□□ -0.12
USP49-201ENST00000373006 PFDN1O60925 122 aa14.32□□□□□ -0.12
USP49-201ENST00000373006 DNAJC6O75061 913 aa14.32□□□□□ -0.12
USP49-201ENST00000373006 ZC3H11AO75152 810 aaKnown RBP eCLIP14.32□□□□□ -0.12
USP49-201ENST00000373006 AVILO75366 819 aa14.32□□□□□ -0.12
USP49-201ENST00000373006 LYNP07948 512 aa14.32□□□□□ -0.12
USP49-201ENST00000373006 GSTA2P09210 222 aa14.32□□□□□ -0.12
USP49-201ENST00000373006 MMP10P09238 476 aa14.32□□□□□ -0.12
USP49-201ENST00000373006 SLC5A9Q2M3M2 681 aa14.32□□□□□ -0.12
USP49-201ENST00000373006 ZBTB41Q5SVQ8 909 aa14.32□□□□□ -0.12
USP49-201ENST00000373006 DACT2Q5SW24 774 aa14.32□□□□□ -0.12
USP49-201ENST00000373006 UNC45BQ8IWX7 931 aa14.32□□□□□ -0.12
USP49-201ENST00000373006 NAT8LQ8N9F0 302 aa14.32□□□□□ -0.12
USP49-201ENST00000373006 SHKBP1Q8TBC3 707 aa14.32□□□□□ -0.12
USP49-201ENST00000373006 NKD2Q969F2 451 aaPredicted RBP14.32□□□□□ -0.12
USP49-201ENST00000373006 ZBTB45Q96K62 511 aaPredicted RBP14.32□□□□□ -0.12
USP49-201ENST00000373006 TELO2Q9Y4R8 837 aa14.32□□□□□ -0.12
USP49-201ENST00000373006 C4BPAP04003 597 aaKnown RBP14.32□□□□□ -0.12
USP49-201ENST00000373006 ANPEPP15144 967 aa14.32□□□□□ -0.12
USP49-201ENST00000373006 GSTT1P30711 240 aa14.32□□□□□ -0.12
USP49-201ENST00000373006 ELK3P41970 407 aa14.32□□□□□ -0.12
USP49-201ENST00000373006 ETV4P43268 484 aa14.32□□□□□ -0.12
USP49-201ENST00000373006 DNAJC24Q6P3W2 148 aa14.32□□□□□ -0.12
USP49-201ENST00000373006 RIPOR1Q6ZS17 1223 aa14.32□□□□□ -0.12
USP49-201ENST00000373006 MYLK4Q86YV6 388 aaPredicted RBP14.32□□□□□ -0.12
USP49-201ENST00000373006 PDIK1LQ8N165 341 aa14.32□□□□□ -0.12
USP49-201ENST00000373006 FAM71DQ8N9W8 422 aa14.32□□□□□ -0.12
USP49-201ENST00000373006 CCDC110Q8TBZ0 833 aa14.32□□□□□ -0.12
USP49-201ENST00000373006 TAAR1Q96RJ0 339 aa14.32□□□□□ -0.12
USP49-201ENST00000373006 DHRS4Q9BTZ2 278 aa14.32□□□□□ -0.12
USP49-201ENST00000373006 MMP8P22894 467 aa14.32□□□□□ -0.12
USP49-201ENST00000373006 ALDH1B1P30837 517 aa14.32□□□□□ -0.12
USP49-201ENST00000373006 YWHAGP61981 247 aaKnown RBP eCLIP14.32□□□□□ -0.12
USP49-201ENST00000373006 C1QBPQ07021 282 aaKnown RBP14.32□□□□□ -0.12
USP49-201ENST00000373006 TMEM62Q0P6H9 643 aa14.32□□□□□ -0.12
USP49-201ENST00000373006 HSF5Q4G112 596 aaPredicted RBP14.32□□□□□ -0.12
USP49-201ENST00000373006 TAS1R3Q7RTX0 852 aa14.32□□□□□ -0.12
USP49-201ENST00000373006 ARID3BQ8IVW6 561 aaPredicted RBP14.32□□□□□ -0.12
USP49-201ENST00000373006 SLC35B2Q8TB61 432 aa14.32□□□□□ -0.12
USP49-201ENST00000373006 ZFAND2BQ8WV99 257 aa14.32□□□□□ -0.12
USP49-201ENST00000373006 VCPIP1Q96JH7 1222 aa14.32□□□□□ -0.12
USP49-201ENST00000373006 PANX3Q96QZ0 392 aa14.32□□□□□ -0.12
USP49-201ENST00000373006 PPCSQ9HAB8 311 aa14.32□□□□□ -0.12
USP49-201ENST00000373006 KAT6AQ92794 2004 aa14.31□□□□□ -0.12
USP49-201ENST00000373006 ZNF541Q9H0D2 1346 aa14.31□□□□□ -0.12
USP49-201ENST00000373006 LYPLA2O95372 231 aa14.31□□□□□ -0.12
USP49-201ENST00000373006 CD48P09326 243 aa14.31□□□□□ -0.12
USP49-201ENST00000373006 NPR1P16066 1061 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms