RNA–Protein interactions for RNA: ENST00000372998.1

LCN2-202, Transcript of lipocalin 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LCN2, Length 631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-202ENST00000372998 KRT10P13645 584 aa11.4□□□□□ -0.58
LCN2-202ENST00000372998 GNAZP19086 355 aa11.4□□□□□ -0.58
LCN2-202ENST00000372998 ATP6V1C1P21283 382 aa11.4□□□□□ -0.58
LCN2-202ENST00000372998 TGM2P21980 687 aa11.4□□□□□ -0.58
LCN2-202ENST00000372998 SERPINB9P50453 376 aa11.4□□□□□ -0.58
LCN2-202ENST00000372998 EIF3EP60228 445 aaKnown RBP11.4□□□□□ -0.58
LCN2-202ENST00000372998 CDK16Q00536 496 aa11.4□□□□□ -0.58
LCN2-202ENST00000372998 OTUD4Q01804 1114 aaKnown RBP11.4□□□□□ -0.58
LCN2-202ENST00000372998 ROR1Q01973 937 aa11.4□□□□□ -0.58
LCN2-202ENST00000372998 ZBTB16Q05516 673 aa11.4□□□□□ -0.58
LCN2-202ENST00000372998 SLC18A2Q05940 514 aa11.4□□□□□ -0.58
LCN2-202ENST00000372998 MGAT5Q09328 741 aa11.4□□□□□ -0.58
LCN2-202ENST00000372998 LBRQ14739 615 aaKnown RBP11.4□□□□□ -0.58
LCN2-202ENST00000372998 TTC39BQ5VTQ0 682 aaPredicted RBP11.4□□□□□ -0.58
LCN2-202ENST00000372998 SPOPLQ6IQ16 392 aa11.4□□□□□ -0.58
LCN2-202ENST00000372998 BZW1Q7L1Q6 419 aaKnown RBP11.4□□□□□ -0.58
LCN2-202ENST00000372998 RFX6Q8HWS3 928 aa11.4□□□□□ -0.58
LCN2-202ENST00000372998 RHPN2Q8IUC4 686 aa11.4□□□□□ -0.58
LCN2-202ENST00000372998 KCTD6Q8NC69 237 aa11.4□□□□□ -0.58
LCN2-202ENST00000372998 CMASQ8NFW8 434 aaPredicted RBP11.4□□□□□ -0.58
LCN2-202ENST00000372998 ACTL9Q8TC94 416 aa11.4□□□□□ -0.58
LCN2-202ENST00000372998 AFG1LQ8WV93 481 aa11.4□□□□□ -0.58
LCN2-202ENST00000372998 JDP2Q8WYK2 163 aa11.4□□□□□ -0.58
LCN2-202ENST00000372998 STMN2Q93045 179 aa11.4□□□□□ -0.58
LCN2-202ENST00000372998 ATG4CQ96DT6 458 aa11.4□□□□□ -0.58
LCN2-202ENST00000372998 THOC1Q96FV9 657 aaKnown RBP11.4□□□□□ -0.58
LCN2-202ENST00000372998 NUDCD1Q96RS6 583 aa11.4□□□□□ -0.58
LCN2-202ENST00000372998 SH2D3AQ9BRG2 576 aa11.4□□□□□ -0.58
LCN2-202ENST00000372998 BTBD10Q9BSF8 475 aa11.4□□□□□ -0.58
LCN2-202ENST00000372998 TCHPQ9BT92 498 aa11.4□□□□□ -0.58
LCN2-202ENST00000372998 TARS2Q9BW92 718 aaKnown RBP11.4□□□□□ -0.58
LCN2-202ENST00000372998 TBC1D10AQ9BXI6 508 aa11.4□□□□□ -0.58
LCN2-202ENST00000372998 FHDC1Q9C0D6 1143 aaPredicted RBP11.4□□□□□ -0.58
LCN2-202ENST00000372998 SYNCQ9H7C4 482 aa11.4□□□□□ -0.58
LCN2-202ENST00000372998 DNAJB4Q9UDY4 337 aa11.4□□□□□ -0.58
LCN2-202ENST00000372998 XPO7Q9UIA9 1087 aaKnown RBP11.4□□□□□ -0.58
LCN2-202ENST00000372998 ZNF112Q9UJU3 913 aa11.4□□□□□ -0.58
LCN2-202ENST00000372998 PPP2R3BQ9Y5P8 575 aa11.4□□□□□ -0.58
LCN2-202ENST00000372998 DHRS4L1P0CG22 281 aa11.39□□□□□ -0.59
LCN2-202ENST00000372998 ZFXP17010 805 aaPredicted RBP11.39□□□□□ -0.59
LCN2-202ENST00000372998 RPL22P35268 128 aaKnown RBP11.39□□□□□ -0.59
LCN2-202ENST00000372998 VHLP40337 213 aa11.39□□□□□ -0.59
LCN2-202ENST00000372998 GABRB2P47870 512 aa11.39□□□□□ -0.59
LCN2-202ENST00000372998 PSMC1P62191 440 aaKnown RBP11.39□□□□□ -0.59
LCN2-202ENST00000372998 RPL7AP62424 266 aaKnown RBP11.39□□□□□ -0.59
LCN2-202ENST00000372998 SARNPP82979 210 aaKnown RBP11.39□□□□□ -0.59
LCN2-202ENST00000372998 SLC25A11Q02978 314 aaKnown RBP11.39□□□□□ -0.59
LCN2-202ENST00000372998 POU5F1BQ06416 359 aa11.39□□□□□ -0.59
LCN2-202ENST00000372998 TARBP2Q15633 366 aaKnown RBP11.39□□□□□ -0.59
LCN2-202ENST00000372998 SLC1A5Q15758 541 aa11.39□□□□□ -0.59
LCN2-202ENST00000372998 CCDC6Q16204 474 aa11.39□□□□□ -0.59
LCN2-202ENST00000372998 ZNF667Q5HYK9 610 aa11.39□□□□□ -0.59
LCN2-202ENST00000372998 STXBP5Q5T5C0 1151 aa11.39□□□□□ -0.59
LCN2-202ENST00000372998 CDCA2Q69YH5 1023 aaPredicted RBP11.39□□□□□ -0.59
LCN2-202ENST00000372998 CAPRIN2Q6IMN6 1127 aaKnown RBP11.39□□□□□ -0.59
LCN2-202ENST00000372998 MPZL3Q6UWV2 235 aa11.39□□□□□ -0.59
LCN2-202ENST00000372998 CLNKQ7Z7G1 428 aa11.39□□□□□ -0.59
LCN2-202ENST00000372998 NT5DC4Q86YG4 428 aa11.39□□□□□ -0.59
LCN2-202ENST00000372998 APOBEC3FQ8IUX4 373 aaKnown RBP11.39□□□□□ -0.59
LCN2-202ENST00000372998 C4orf33Q8N1A6 199 aa11.39□□□□□ -0.59
LCN2-202ENST00000372998 VPS52Q8N1B4 723 aa11.39□□□□□ -0.59
LCN2-202ENST00000372998 KIF2BQ8N4N8 673 aa11.39□□□□□ -0.59
LCN2-202ENST00000372998 FAM13CQ8NE31 585 aa11.39□□□□□ -0.59
LCN2-202ENST00000372998 ASAP3Q8TDY4 903 aa11.39□□□□□ -0.59
LCN2-202ENST00000372998 TEKT4Q8WW24 435 aa11.39□□□□□ -0.59
LCN2-202ENST00000372998 SLC44A1Q8WWI5 657 aa11.39□□□□□ -0.59
LCN2-202ENST00000372998 SEPT1Q8WYJ6 367 aa11.39□□□□□ -0.59
LCN2-202ENST00000372998 CPT1BQ92523 772 aa11.39□□□□□ -0.59
LCN2-202ENST00000372998 MCUR1Q96AQ8 359 aa11.39□□□□□ -0.59
LCN2-202ENST00000372998 TBCBQ99426 244 aa11.39□□□□□ -0.59
LCN2-202ENST00000372998 CCDC28BQ9BUN5 200 aa11.39□□□□□ -0.59
LCN2-202ENST00000372998 STN1Q9H668 368 aaKnown RBP11.39□□□□□ -0.59
LCN2-202ENST00000372998 KCNK4Q9NYG8 393 aa11.39□□□□□ -0.59
LCN2-202ENST00000372998 HAO1Q9UJM8 370 aa11.39□□□□□ -0.59
LCN2-202ENST00000372998 CPSF3Q9UKF6 684 aaKnown RBP11.39□□□□□ -0.59
LCN2-202ENST00000372998 ANGPTL2Q9UKU9 493 aa11.39□□□□□ -0.59
LCN2-202ENST00000372998 L3MBTL1Q9Y468 752 aa11.39□□□□□ -0.59
LCN2-202ENST00000372998 RLFQ13129 1914 aa11.39□□□□□ -0.59
LCN2-202ENST00000372998 ZNF541Q9H0D2 1346 aa11.38□□□□□ -0.59
LCN2-202ENST00000372998 SCN4AP35499 1836 aa11.38□□□□□ -0.59
LCN2-202ENST00000372998 C3orf70A6NLC5 250 aaPredicted RBP11.38□□□□□ -0.59
LCN2-202ENST00000372998 F8VP50 259 aa11.38□□□□□ -0.59
LCN2-202ENST00000372998 F8W8V4 182 aa11.38□□□□□ -0.59
LCN2-202ENST00000372998 COPEO14579 308 aa11.38□□□□□ -0.59
LCN2-202ENST00000372998 BIRC5O15392 142 aa11.38□□□□□ -0.59
LCN2-202ENST00000372998 GYG2O15488 501 aa11.38□□□□□ -0.59
LCN2-202ENST00000372998 PEX11AO75192 247 aa11.38□□□□□ -0.59
LCN2-202ENST00000372998 KRT38O76015 456 aa11.38□□□□□ -0.59
LCN2-202ENST00000372998 HMGCRP04035 888 aa11.38□□□□□ -0.59
LCN2-202ENST00000372998 ERBB2P04626 1255 aa11.38□□□□□ -0.59
LCN2-202ENST00000372998 PRKCBP05771 671 aa11.38□□□□□ -0.59
LCN2-202ENST00000372998 SNRPAP09012 282 aaKnown RBP11.38□□□□□ -0.59
LCN2-202ENST00000372998 TPBGLP0DKB5 382 aa11.38□□□□□ -0.59
LCN2-202ENST00000372998 SETSIPP0DME0 302 aa11.38□□□□□ -0.59
LCN2-202ENST00000372998 VDRP11473 427 aa11.38□□□□□ -0.59
LCN2-202ENST00000372998 ESRRAP11474 423 aaPredicted RBP11.38□□□□□ -0.59
LCN2-202ENST00000372998 TARSP26639 723 aaKnown RBP11.38□□□□□ -0.59
LCN2-202ENST00000372998 STAT5BP51692 787 aa11.38□□□□□ -0.59
LCN2-202ENST00000372998 RAD23BP54727 409 aa11.38□□□□□ -0.59
LCN2-202ENST00000372998 SH3BGRP55822 239 aaPredicted RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms