RNA–Protein interactions for RNA: ENST00000372837.3

CHCHD1-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 1, humanhuman

TSL 2 BASIC

Gene CHCHD1, Length 1,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1-202ENST00000372837 RANBP17Q9H2T7 1088 aaKnown RBP13.59□□□□□ -0.23
CHCHD1-202ENST00000372837 VCXQ9H320 206 aa13.59□□□□□ -0.23
CHCHD1-202ENST00000372837 AZI2Q9H6S1 392 aa13.59□□□□□ -0.23
CHCHD1-202ENST00000372837 TMEM206Q9H813 350 aa13.59□□□□□ -0.23
CHCHD1-202ENST00000372837 MAP3K20Q9NYL2 800 aaKnown RBP13.59□□□□□ -0.23
CHCHD1-202ENST00000372837 ZFATQ9P243 1243 aa13.59□□□□□ -0.23
CHCHD1-202ENST00000372837 GPR179Q6PRD1 2367 aa13.58□□□□□ -0.24
CHCHD1-202ENST00000372837 CDH16O75309 829 aa13.58□□□□□ -0.24
CHCHD1-202ENST00000372837 KRT13P13646 458 aa13.58□□□□□ -0.24
CHCHD1-202ENST00000372837 SLC9A1P19634 815 aa13.58□□□□□ -0.24
CHCHD1-202ENST00000372837 PAX7P23759 505 aa13.58□□□□□ -0.24
CHCHD1-202ENST00000372837 DNAJB1P25685 340 aa13.58□□□□□ -0.24
CHCHD1-202ENST00000372837 PLTPP55058 493 aa13.58□□□□□ -0.24
CHCHD1-202ENST00000372837 IL9RQ01113 521 aa13.58□□□□□ -0.24
CHCHD1-202ENST00000372837 CACNB1Q02641 598 aaPredicted RBP13.58□□□□□ -0.24
CHCHD1-202ENST00000372837 ARID5AQ03989 594 aa13.58□□□□□ -0.24
CHCHD1-202ENST00000372837 PDCD2Q16342 344 aaPredicted RBP13.58□□□□□ -0.24
CHCHD1-202ENST00000372837 RSPO4Q2I0M5 234 aaPredicted RBP13.58□□□□□ -0.24
CHCHD1-202ENST00000372837 TSNAXIP1Q2TAA8 658 aa13.58□□□□□ -0.24
CHCHD1-202ENST00000372837 PPP1R2P3Q6NXS1 205 aa13.58□□□□□ -0.24
CHCHD1-202ENST00000372837 EXOC3L1Q86VI1 746 aa13.58□□□□□ -0.24
CHCHD1-202ENST00000372837 C12orf56Q8IXR9 622 aa13.58□□□□□ -0.24
CHCHD1-202ENST00000372837 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.58□□□□□ -0.242e-7■■■■■ 102.3
CHCHD1-202ENST00000372837 FBXO25Q8TCJ0 367 aa13.58□□□□□ -0.24
CHCHD1-202ENST00000372837 DYDC1Q8WWB3 177 aa13.58□□□□□ -0.24
CHCHD1-202ENST00000372837 GJA10Q969M2 543 aa13.58□□□□□ -0.24
CHCHD1-202ENST00000372837 SPDL1Q96EA4 605 aa13.58□□□□□ -0.24
CHCHD1-202ENST00000372837 ZSWIM1Q9BR11 485 aa13.58□□□□□ -0.24
CHCHD1-202ENST00000372837 RUSC1Q9BVN2 902 aa13.58□□□□□ -0.24
CHCHD1-202ENST00000372837 SMOC2Q9H3U7 446 aa13.58□□□□□ -0.24
CHCHD1-202ENST00000372837 TLE6Q9H808 572 aa13.58□□□□□ -0.24
CHCHD1-202ENST00000372837 RNPEPL1Q9HAU8 725 aa13.58□□□□□ -0.24
CHCHD1-202ENST00000372837 SSU72Q9NP77 194 aaKnown RBP13.58□□□□□ -0.24
CHCHD1-202ENST00000372837 DMAC2Q9NW81 257 aa13.58□□□□□ -0.24
CHCHD1-202ENST00000372837 NKIRAS1Q9NYS0 192 aa13.58□□□□□ -0.24
CHCHD1-202ENST00000372837 UVRAGQ9P2Y5 699 aa13.58□□□□□ -0.24
CHCHD1-202ENST00000372837 EMSYQ7Z589 1322 aa13.58□□□□□ -0.24
CHCHD1-202ENST00000372837 ADGRA3Q8IWK6 1321 aa13.58□□□□□ -0.24
CHCHD1-202ENST00000372837 MEIS1O00470 390 aa13.57□□□□□ -0.24
CHCHD1-202ENST00000372837 ARIH2O95376 493 aa13.57□□□□□ -0.24
CHCHD1-202ENST00000372837 PECAM1P16284 738 aaPredicted RBP13.57□□□□□ -0.24
CHCHD1-202ENST00000372837 GNAZP19086 355 aa13.57□□□□□ -0.24
CHCHD1-202ENST00000372837 HOXD13P35453 343 aa13.57□□□□□ -0.24
CHCHD1-202ENST00000372837 COILP38432 576 aaPredicted RBP13.57□□□□□ -0.24
CHCHD1-202ENST00000372837 NRIP1P48552 1158 aa13.57□□□□□ -0.24
CHCHD1-202ENST00000372837 FMO5P49326 533 aa13.57□□□□□ -0.24
CHCHD1-202ENST00000372837 CLCN5P51795 746 aa13.57□□□□□ -0.24
CHCHD1-202ENST00000372837 CASP5P51878 434 aa13.57□□□□□ -0.24
CHCHD1-202ENST00000372837 SNAP25P60880 206 aa13.57□□□□□ -0.24
CHCHD1-202ENST00000372837 GPC5P78333 572 aa13.57□□□□□ -0.24
CHCHD1-202ENST00000372837 ZNF200P98182 395 aaPredicted RBP13.57□□□□□ -0.24
CHCHD1-202ENST00000372837 ROR2Q01974 943 aaKnown RBP13.57□□□□□ -0.24
CHCHD1-202ENST00000372837 ANGPT1Q15389 498 aa13.57□□□□□ -0.24
CHCHD1-202ENST00000372837 CEP55Q53EZ4 464 aa13.57□□□□□ -0.24
CHCHD1-202ENST00000372837 ANKRD20A2Q5SQ80 823 aa13.57□□□□□ -0.24
CHCHD1-202ENST00000372837 ANKRD20A1Q5TYW2 823 aa13.57□□□□□ -0.24
CHCHD1-202ENST00000372837 ANKRD20A3Q5VUR7 823 aa13.57□□□□□ -0.24
CHCHD1-202ENST00000372837 ZNF720Q7Z2F6 126 aa13.57□□□□□ -0.24
CHCHD1-202ENST00000372837 SDCCAG8Q86SQ7 713 aaPredicted RBP13.57□□□□□ -0.24
CHCHD1-202ENST00000372837 UBALD2Q8IYN6 164 aa13.57□□□□□ -0.24
CHCHD1-202ENST00000372837 ARHGAP18Q8N392 663 aa13.57□□□□□ -0.24
CHCHD1-202ENST00000372837 MDM1Q8TC05 714 aa13.57□□□□□ -0.24
CHCHD1-202ENST00000372837 CLP1Q92989 425 aaKnown RBP13.57□□□□□ -0.24
CHCHD1-202ENST00000372837 PPP2R3CQ969Q6 453 aa13.57□□□□□ -0.24
CHCHD1-202ENST00000372837 DTNBP1Q96EV8 351 aa13.57□□□□□ -0.24
CHCHD1-202ENST00000372837 TRAPPC9Q96Q05 1148 aa13.57□□□□□ -0.24
CHCHD1-202ENST00000372837 DPH5Q9H2P9 285 aa13.57□□□□□ -0.24
CHCHD1-202ENST00000372837 FETUBQ9UGM5 382 aa13.57□□□□□ -0.24
CHCHD1-202ENST00000372837 SMG5Q9UPR3 1016 aaKnown RBP13.57□□□□□ -0.24
CHCHD1-202ENST00000372837 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.57□□□□□ -0.24
CHCHD1-202ENST00000372837 USH1CQ9Y6N9 552 aa13.57□□□□□ -0.24
CHCHD1-202ENST00000372837 LRRD1A4D1F6 860 aa13.56□□□□□ -0.24
CHCHD1-202ENST00000372837 ARHGEF35A5YM69 484 aa13.56□□□□□ -0.24
CHCHD1-202ENST00000372837 OPLAHO14841 1288 aa13.56□□□□□ -0.24
CHCHD1-202ENST00000372837 TGFB1I1O43294 461 aa13.56□□□□□ -0.24
CHCHD1-202ENST00000372837 SLITRK3O94933 977 aa13.56□□□□□ -0.24
CHCHD1-202ENST00000372837 ECEL1O95672 775 aa13.56□□□□□ -0.24
CHCHD1-202ENST00000372837 TTC4O95801 387 aa13.56□□□□□ -0.24
CHCHD1-202ENST00000372837 MMP3P08254 477 aa13.56□□□□□ -0.24
CHCHD1-202ENST00000372837 TXNP10599 105 aaKnown RBP13.56□□□□□ -0.24
CHCHD1-202ENST00000372837 ATP6V1C1P21283 382 aa13.56□□□□□ -0.24
CHCHD1-202ENST00000372837 SP100P23497 879 aaPredicted RBP13.56□□□□□ -0.24
CHCHD1-202ENST00000372837 PEX5P50542 639 aa13.56□□□□□ -0.24
CHCHD1-202ENST00000372837 CLCN2P51788 898 aa13.56□□□□□ -0.24
CHCHD1-202ENST00000372837 RNASE9P60153 205 aaKnown RBP13.56□□□□□ -0.24
CHCHD1-202ENST00000372837 MYL7Q01449 175 aa13.56□□□□□ -0.24
CHCHD1-202ENST00000372837 CENPCQ03188 943 aa13.56□□□□□ -0.24
CHCHD1-202ENST00000372837 PTP4A2Q12974 167 aa13.56□□□□□ -0.24
CHCHD1-202ENST00000372837 BAATQ14032 418 aaPredicted RBP13.56□□□□□ -0.24
CHCHD1-202ENST00000372837 ACAP1Q15027 740 aa13.56□□□□□ -0.24
CHCHD1-202ENST00000372837 ACCSLQ4AC99 568 aa13.56□□□□□ -0.24
CHCHD1-202ENST00000372837 RHBDF2Q6PJF5 856 aa13.56□□□□□ -0.24
CHCHD1-202ENST00000372837 INTS8Q75QN2 995 aaKnown RBP13.56□□□□□ -0.24
CHCHD1-202ENST00000372837 RBM23Q86U06 439 aaKnown RBP13.56□□□□□ -0.24
CHCHD1-202ENST00000372837 MCF2L2Q86YR7 1114 aa13.56□□□□□ -0.24
CHCHD1-202ENST00000372837 SLC13A5Q86YT5 568 aaPredicted RBP13.56□□□□□ -0.24
CHCHD1-202ENST00000372837 TPH2Q8IWU9 490 aa13.56□□□□□ -0.24
CHCHD1-202ENST00000372837 C7orf31Q8N865 590 aa13.56□□□□□ -0.24
CHCHD1-202ENST00000372837 PRELID2Q8N945 189 aa13.56□□□□□ -0.24
CHCHD1-202ENST00000372837 STK32AQ8WU08 396 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms