RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 MRPS35P82673 323 aaKnown RBP11.97□□□□□ -0.49
VCL-202ENST00000372755 CCZ1BP86790 482 aa11.97□□□□□ -0.49
VCL-202ENST00000372755 CCZ1P86791 482 aaPredicted RBP11.97□□□□□ -0.49
VCL-202ENST00000372755 ANKS6Q68DC2 871 aa11.97□□□□□ -0.49
VCL-202ENST00000372755 ARHGAP17Q68EM7 881 aa11.97□□□□□ -0.49
VCL-202ENST00000372755 TIGD7Q6NT04 549 aaPredicted RBP11.97□□□□□ -0.49
VCL-202ENST00000372755 BARGINQ6ZT62 677 aa11.97□□□□□ -0.49
VCL-202ENST00000372755 COL23A1Q86Y22 540 aaPredicted RBP11.97□□□□□ -0.49
VCL-202ENST00000372755 C3orf20Q8ND61 904 aa11.97□□□□□ -0.49
VCL-202ENST00000372755 FAM151AQ8WW52 585 aa11.97□□□□□ -0.49
VCL-202ENST00000372755 MRPL48Q96GC5 212 aaKnown RBP11.97□□□□□ -0.49
VCL-202ENST00000372755 SH2D3AQ9BRG2 576 aa11.97□□□□□ -0.49
VCL-202ENST00000372755 UBE2OQ9C0C9 1292 aaKnown RBP11.97□□□□□ -0.49
VCL-202ENST00000372755 DIABLOQ9NR28 239 aa11.97□□□□□ -0.49
VCL-202ENST00000372755 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.97□□□□□ -0.49
VCL-202ENST00000372755 TRIM49D1C9J1S8 452 aa11.97□□□□□ -0.49
VCL-202ENST00000372755 DYRK3O43781 588 aa11.97□□□□□ -0.49
VCL-202ENST00000372755 EPHB2P29323 1055 aa11.97□□□□□ -0.49
VCL-202ENST00000372755 SERPINB8P50452 374 aa11.97□□□□□ -0.49
VCL-202ENST00000372755 KRR1Q13601 381 aaKnown RBP11.97□□□□□ -0.49
VCL-202ENST00000372755 NAA30Q147X3 362 aaPredicted RBP11.97□□□□□ -0.49
VCL-202ENST00000372755 ACAD10Q6JQN1 1059 aa11.97□□□□□ -0.49
VCL-202ENST00000372755 CCDC81Q6ZN84 652 aa11.97□□□□□ -0.49
VCL-202ENST00000372755 STOX1Q6ZVD7 989 aa11.97□□□□□ -0.49
VCL-202ENST00000372755 SUGP1Q8IWZ8 645 aaKnown RBP11.97□□□□□ -0.49
VCL-202ENST00000372755 CD302Q8IX05 232 aa11.97□□□□□ -0.49
VCL-202ENST00000372755 GPRASP2Q96D09 838 aa11.97□□□□□ -0.49
VCL-202ENST00000372755 ZNF512BQ96KM6 892 aaPredicted RBP11.97□□□□□ -0.49
VCL-202ENST00000372755 COPS7BQ9H9Q2 264 aaPredicted RBP11.97□□□□□ -0.49
VCL-202ENST00000372755 CFAP65Q6ZU64 1925 aaKnown RBP11.96□□□□□ -0.49
VCL-202ENST00000372755 KANSL1LA0AUZ9 987 aa11.96□□□□□ -0.49
VCL-202ENST00000372755 VCLP18206 1134 aa11.96□□□□□ -0.49
VCL-202ENST00000372755 TGM2P21980 687 aa11.96□□□□□ -0.49
VCL-202ENST00000372755 CHI3L1P36222 383 aaPredicted RBP11.96□□□□□ -0.49
VCL-202ENST00000372755 ALDH6A1Q02252 535 aaKnown RBP11.96□□□□□ -0.49
VCL-202ENST00000372755 FGD2Q7Z6J4 655 aa11.96□□□□□ -0.49
VCL-202ENST00000372755 CYP4Z1Q86W10 505 aa11.96□□□□□ -0.49
VCL-202ENST00000372755 IGDCC4Q8TDY8 1250 aa11.96□□□□□ -0.49
VCL-202ENST00000372755 UCMAQ8WVF2 138 aa11.96□□□□□ -0.49
VCL-202ENST00000372755 WDCPQ9H6R7 721 aa11.96□□□□□ -0.49
VCL-202ENST00000372755 C17orf102A2RUQ5 167 aa11.96□□□□□ -0.49
VCL-202ENST00000372755 RSPH10B2B2RC85 870 aa11.96□□□□□ -0.49
VCL-202ENST00000372755 RSPH10BP0C881 870 aa11.96□□□□□ -0.49
VCL-202ENST00000372755 ACADSP16219 412 aa11.96□□□□□ -0.49
VCL-202ENST00000372755 SERPINB3P29508 390 aa11.96□□□□□ -0.49
VCL-202ENST00000372755 SOX6P35712 828 aa11.96□□□□□ -0.49
VCL-202ENST00000372755 NUDT2P50583 147 aa11.96□□□□□ -0.49
VCL-202ENST00000372755 CDC42EP5Q6NZY7 148 aa11.96□□□□□ -0.49
VCL-202ENST00000372755 DENND1BQ6P3S1 775 aa11.96□□□□□ -0.49
VCL-202ENST00000372755 ZNF333Q96JL9 665 aa11.96□□□□□ -0.49
VCL-202ENST00000372755 FAM118BQ9BPY3 351 aa11.96□□□□□ -0.49
VCL-202ENST00000372755 PAPOLBQ9NRJ5 636 aaKnown RBP11.96□□□□□ -0.49
VCL-202ENST00000372755 SMARCAL1Q9NZC9 954 aa11.96□□□□□ -0.49
VCL-202ENST00000372755 SOX13Q9UN79 622 aa11.96□□□□□ -0.49
VCL-202ENST00000372755 MAP3K4Q9Y6R4 1608 aa11.96□□□□□ -0.49
VCL-202ENST00000372755 FXR1P51114 621 aaKnown RBP eCLIP11.96□□□□□ -0.492e-6■■■□□ 15.2
VCL-202ENST00000372755 RPS6P62753 249 aaKnown RBP11.96□□□□□ -0.49
VCL-202ENST00000372755 SCARF1Q14162 830 aa11.96□□□□□ -0.49
VCL-202ENST00000372755 ATG9AQ7Z3C6 839 aa11.96□□□□□ -0.49
VCL-202ENST00000372755 CENPLQ8N0S6 344 aaPredicted RBP11.96□□□□□ -0.49
VCL-202ENST00000372755 EMILIN2Q9BXX0 1053 aa11.96□□□□□ -0.49
VCL-202ENST00000372755 DPP3Q9NY33 737 aa11.96□□□□□ -0.49
VCL-202ENST00000372755 CTNNAL1Q9UBT7 734 aa11.96□□□□□ -0.49
VCL-202ENST00000372755 TUBE1Q9UJT0 475 aa11.96□□□□□ -0.49
VCL-202ENST00000372755 TMCC3Q9ULS5 477 aa11.96□□□□□ -0.49
VCL-202ENST00000372755 V9GYQ6 96 aa11.96□□□□□ -0.49
VCL-202ENST00000372755 KIF1BO60333 1816 aa11.96□□□□□ -0.5
VCL-202ENST00000372755 F5H5T6 163 aa11.96□□□□□ -0.5
VCL-202ENST00000372755 TK2O00142 265 aa11.96□□□□□ -0.5
VCL-202ENST00000372755 ATMINO43313 823 aaPredicted RBP11.96□□□□□ -0.5
VCL-202ENST00000372755 THRAP10827 490 aa11.96□□□□□ -0.5
VCL-202ENST00000372755 GUCA1AP43080 201 aaPredicted RBP11.96□□□□□ -0.5
VCL-202ENST00000372755 NUP107P57740 925 aa11.96□□□□□ -0.5
VCL-202ENST00000372755 JADE3Q92613 823 aa11.96□□□□□ -0.5
VCL-202ENST00000372755 GTF3C4Q9UKN8 822 aa11.96□□□□□ -0.5
VCL-202ENST00000372755 AP4S1Q9Y587 144 aa11.96□□□□□ -0.5
VCL-202ENST00000372755 SAMD9LQ8IVG5 1584 aa11.96□□□□□ -0.5
VCL-202ENST00000372755 LOC100653049A0A140TA62 436 aa11.96□□□□□ -0.5
VCL-202ENST00000372755 KRT34O76011 436 aa11.96□□□□□ -0.5
VCL-202ENST00000372755 CTCFP49711 727 aaPredicted RBP11.96□□□□□ -0.5
VCL-202ENST00000372755 RAB14P61106 215 aa11.96□□□□□ -0.5
VCL-202ENST00000372755 IRX1P78414 480 aaPredicted RBP11.96□□□□□ -0.5
VCL-202ENST00000372755 BTKQ06187 659 aa11.96□□□□□ -0.5
VCL-202ENST00000372755 CDC16Q13042 620 aa11.96□□□□□ -0.5
VCL-202ENST00000372755 CUL2Q13617 745 aa11.96□□□□□ -0.5
VCL-202ENST00000372755 ADRM1Q16186 407 aa11.96□□□□□ -0.5
VCL-202ENST00000372755 USP39Q53GS9 565 aaKnown RBP11.96□□□□□ -0.5
VCL-202ENST00000372755 CYP4A22Q5TCH4 519 aa11.96□□□□□ -0.5
VCL-202ENST00000372755 DDI1Q8WTU0 396 aa11.96□□□□□ -0.5
VCL-202ENST00000372755 ZIM3Q96PE6 472 aa11.96□□□□□ -0.5
VCL-202ENST00000372755 CAMKK2Q96RR4 588 aa11.96□□□□□ -0.5
VCL-202ENST00000372755 KRT84Q9NSB2 600 aa11.96□□□□□ -0.5
VCL-202ENST00000372755 RPS6KB2Q9UBS0 482 aa11.96□□□□□ -0.5
VCL-202ENST00000372755 SLC25A13Q9UJS0 675 aa11.96□□□□□ -0.5
VCL-202ENST00000372755 TIMM44O43615 452 aa11.95□□□□□ -0.5
VCL-202ENST00000372755 IFNA14P01570 189 aa11.95□□□□□ -0.5
VCL-202ENST00000372755 TMED10P49755 219 aaKnown RBP11.95□□□□□ -0.5
VCL-202ENST00000372755 CAMK2GQ13555 558 aaPredicted RBP11.95□□□□□ -0.5
VCL-202ENST00000372755 LRRC71Q8N4P6 559 aa11.95□□□□□ -0.5
VCL-202ENST00000372755 ANKS1AQ92625 1134 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms