RNA–Protein interactions for RNA: ENST00000372243.7

TMEM53-204, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-204ENST00000372243 CSNK1G1Q9HCP0 422 aa16.77■□□□□ 0.28
TMEM53-204ENST00000372243 COLQQ9Y215 455 aaPredicted RBP16.77■□□□□ 0.28
TMEM53-204ENST00000372243 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.77■□□□□ 0.27
TMEM53-204ENST00000372243 MTMR11A4FU01 709 aa16.77■□□□□ 0.27
TMEM53-204ENST00000372243 C2orf71A6NGG8 1288 aa16.77■□□□□ 0.27
TMEM53-204ENST00000372243 CLDN5O00501 218 aa16.77■□□□□ 0.27
TMEM53-204ENST00000372243 TEX28O15482 410 aa16.77■□□□□ 0.27
TMEM53-204ENST00000372243 ADAM12O43184 909 aa16.77■□□□□ 0.27
TMEM53-204ENST00000372243 RTN2O75298 545 aa16.77■□□□□ 0.27
TMEM53-204ENST00000372243 C1RP00736 705 aa16.77■□□□□ 0.27
TMEM53-204ENST00000372243 FAM200BP0CF97 657 aa16.77■□□□□ 0.27
TMEM53-204ENST00000372243 NPR3P17342 541 aa16.77■□□□□ 0.27
TMEM53-204ENST00000372243 RPL17P18621 184 aaKnown RBP16.77■□□□□ 0.27
TMEM53-204ENST00000372243 MAGEA11P43364 429 aa16.77■□□□□ 0.27
TMEM53-204ENST00000372243 ARPP19P56211 112 aa16.77■□□□□ 0.27
TMEM53-204ENST00000372243 SPA17Q15506 151 aa16.77■□□□□ 0.27
TMEM53-204ENST00000372243 PRPF38BQ5VTL8 546 aaKnown RBP16.77■□□□□ 0.27
TMEM53-204ENST00000372243 ACAD10Q6JQN1 1059 aa16.77■□□□□ 0.27
TMEM53-204ENST00000372243 VSTM1Q6UX27 236 aa16.77■□□□□ 0.27
TMEM53-204ENST00000372243 PASD1Q8IV76 773 aa16.77■□□□□ 0.27
TMEM53-204ENST00000372243 SLC35F5Q8WV83 523 aa16.77■□□□□ 0.27
TMEM53-204ENST00000372243 ARNTL2Q8WYA1 636 aa16.77■□□□□ 0.27
TMEM53-204ENST00000372243 UBXN6Q9BZV1 441 aa16.77■□□□□ 0.27
TMEM53-204ENST00000372243 SPTLC3Q9NUV7 552 aa16.77■□□□□ 0.27
TMEM53-204ENST00000372243 AFF4Q9UHB7 1163 aaKnown RBP16.77■□□□□ 0.27
TMEM53-204ENST00000372243 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.77■□□□□ 0.27
TMEM53-204ENST00000372243 CHD7Q9P2D1 2997 aa16.76■□□□□ 0.27
TMEM53-204ENST00000372243 LAMA3Q16787 3333 aa16.76■□□□□ 0.27
TMEM53-204ENST00000372243 TMEM265A0A087WTH1 108 aa16.76■□□□□ 0.27
TMEM53-204ENST00000372243 ZNF263O14978 683 aa16.76■□□□□ 0.27
TMEM53-204ENST00000372243 LPXNO60711 386 aa16.76■□□□□ 0.27
TMEM53-204ENST00000372243 ADH1AP07327 375 aa16.76■□□□□ 0.27
TMEM53-204ENST00000372243 CNPP09543 421 aaKnown RBP16.76■□□□□ 0.27
TMEM53-204ENST00000372243 ATF2P15336 505 aa16.76■□□□□ 0.27
TMEM53-204ENST00000372243 SSTR3P32745 418 aaPredicted RBP16.76■□□□□ 0.27
TMEM53-204ENST00000372243 PLA2G4AP47712 749 aa16.76■□□□□ 0.27
TMEM53-204ENST00000372243 KRT83P78385 493 aa16.76■□□□□ 0.27
TMEM53-204ENST00000372243 PDE4CQ08493 712 aa16.76■□□□□ 0.27
TMEM53-204ENST00000372243 CCDC122Q5T0U0 273 aa16.76■□□□□ 0.27
TMEM53-204ENST00000372243 RNF19BQ6ZMZ0 732 aa16.76■□□□□ 0.27
TMEM53-204ENST00000372243 CLEC20AQ6ZU45 233 aa16.76■□□□□ 0.27
TMEM53-204ENST00000372243 PHF13Q86YI8 300 aaPredicted RBP16.76■□□□□ 0.27
TMEM53-204ENST00000372243 UBA3Q8TBC4 463 aa16.76■□□□□ 0.27
TMEM53-204ENST00000372243 SECISBP2LQ93073 1101 aaKnown RBP16.76■□□□□ 0.27
TMEM53-204ENST00000372243 NOX5Q96PH1 765 aa16.76■□□□□ 0.27
TMEM53-204ENST00000372243 KLHL5Q96PQ7 755 aa16.76■□□□□ 0.27
TMEM53-204ENST00000372243 CERS4Q9HA82 394 aa16.76■□□□□ 0.27
TMEM53-204ENST00000372243 PNPLA8Q9NP80 782 aa16.76■□□□□ 0.27
TMEM53-204ENST00000372243 LUC7LQ9NQ29 371 aaKnown RBP16.76■□□□□ 0.27
TMEM53-204ENST00000372243 CYLDQ9NQC7 956 aa16.76■□□□□ 0.27
TMEM53-204ENST00000372243 KRT82Q9NSB4 513 aa16.76■□□□□ 0.27
TMEM53-204ENST00000372243 XPO1O14980 1071 aaKnown RBP16.75■□□□□ 0.27
TMEM53-204ENST00000372243 AP1G2O75843 785 aa16.75■□□□□ 0.27
TMEM53-204ENST00000372243 BDNFP23560 247 aa16.75■□□□□ 0.27
TMEM53-204ENST00000372243 NSFP46459 744 aaKnown RBP16.75■□□□□ 0.27
TMEM53-204ENST00000372243 RPL34P49207 117 aaKnown RBP16.75■□□□□ 0.27
TMEM53-204ENST00000372243 NAA35Q5VZE5 725 aa16.75■□□□□ 0.27
TMEM53-204ENST00000372243 PLPP4Q5VZY2 271 aa16.75■□□□□ 0.27
TMEM53-204ENST00000372243 C1orf131Q8NDD1 294 aaKnown RBP16.75■□□□□ 0.27
TMEM53-204ENST00000372243 MICAL1Q8TDZ2 1067 aa16.75■□□□□ 0.27
TMEM53-204ENST00000372243 VCPIP1Q96JH7 1222 aa16.75■□□□□ 0.27
TMEM53-204ENST00000372243 DMAP1Q9NPF5 467 aaPredicted RBP16.75■□□□□ 0.27
TMEM53-204ENST00000372243 ABI2Q9NYB9 513 aaPredicted RBP16.75■□□□□ 0.27
TMEM53-204ENST00000372243 HIDE1A8MVS5 230 aa16.74■□□□□ 0.27
TMEM53-204ENST00000372243 VNN2O95498 520 aa16.74■□□□□ 0.27
TMEM53-204ENST00000372243 IRS1P35568 1242 aa16.74■□□□□ 0.27
TMEM53-204ENST00000372243 SNX16P57768 344 aa16.74■□□□□ 0.27
TMEM53-204ENST00000372243 PDCLQ13371 301 aa16.74■□□□□ 0.27
TMEM53-204ENST00000372243 TOGARAM2Q6ZUX3 1019 aa16.74■□□□□ 0.27
TMEM53-204ENST00000372243 ATAD1Q8NBU5 361 aa16.74■□□□□ 0.27
TMEM53-204ENST00000372243 MSANTD4Q8NCY6 345 aa16.74■□□□□ 0.27
TMEM53-204ENST00000372243 CPA5Q8WXQ8 436 aa16.74■□□□□ 0.27
TMEM53-204ENST00000372243 KCTD13Q8WZ19 329 aa16.74■□□□□ 0.27
TMEM53-204ENST00000372243 HSFY1Q96LI6 401 aa16.74■□□□□ 0.27
TMEM53-204ENST00000372243 CEP295NLQ96MC4 621 aa16.74■□□□□ 0.27
TMEM53-204ENST00000372243 PGLYRP2Q96PD5 576 aa16.74■□□□□ 0.27
TMEM53-204ENST00000372243 SMOQ99835 787 aa16.74■□□□□ 0.27
TMEM53-204ENST00000372243 SLC4A5Q9BY07 1137 aa16.74■□□□□ 0.27
TMEM53-204ENST00000372243 TAS2R14Q9NYV8 317 aa16.74■□□□□ 0.27
TMEM53-204ENST00000372243 CYTH4Q9UIA0 394 aa16.74■□□□□ 0.27
TMEM53-204ENST00000372243 INTUQ9ULD6 942 aa16.74■□□□□ 0.27
TMEM53-204ENST00000372243 ADGRG1Q9Y653 693 aa16.74■□□□□ 0.27
TMEM53-204ENST00000372243 TRIM66O15016 1216 aa16.73■□□□□ 0.27
TMEM53-204ENST00000372243 BEST1O76090 585 aa16.73■□□□□ 0.27
TMEM53-204ENST00000372243 FTLP02792 175 aaPredicted RBP16.73■□□□□ 0.27
TMEM53-204ENST00000372243 HAPLN1P10915 354 aaPredicted RBP16.73■□□□□ 0.27
TMEM53-204ENST00000372243 MMP8P22894 467 aa16.73■□□□□ 0.27
TMEM53-204ENST00000372243 CYP2F1P24903 491 aa16.73■□□□□ 0.27
TMEM53-204ENST00000372243 CA8P35219 290 aa16.73■□□□□ 0.27
TMEM53-204ENST00000372243 TUFMP49411 452 aaKnown RBP16.73■□□□□ 0.27
TMEM53-204ENST00000372243 MAP3K7CLP57077 242 aa16.73■□□□□ 0.27
TMEM53-204ENST00000372243 ADCY1Q08828 1119 aa16.73■□□□□ 0.27
TMEM53-204ENST00000372243 PMF1Q6P1K2 205 aa16.73■□□□□ 0.27
TMEM53-204ENST00000372243 LILRA6Q6PI73 481 aa16.73■□□□□ 0.27
TMEM53-204ENST00000372243 ERICH1Q86X53 443 aa16.73■□□□□ 0.27
TMEM53-204ENST00000372243 TXLNBQ8N3L3 684 aa16.73■□□□□ 0.27
TMEM53-204ENST00000372243 ZMIZ2Q8NF64 920 aa16.73■□□□□ 0.27
TMEM53-204ENST00000372243 TRIM11Q96F44 468 aa16.73■□□□□ 0.27
TMEM53-204ENST00000372243 C8orf48Q96LL4 319 aa16.73■□□□□ 0.27
TMEM53-204ENST00000372243 MIS12Q9H081 205 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms