RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 IKBKEQ14164 716 aa27.73■■■□□ 2.03
ATPAF1-202ENST00000371937 LRRC26Q2I0M4 334 aa27.73■■■□□ 2.03
ATPAF1-202ENST00000371937 CNKSR3Q6P9H4 555 aa27.73■■■□□ 2.03
ATPAF1-202ENST00000371937 FUKQ8N0W3 1084 aa27.73■■■□□ 2.03
ATPAF1-202ENST00000371937 NOA1Q8NC60 698 aaKnown RBP27.73■■■□□ 2.03
ATPAF1-202ENST00000371937 FNIP1Q8TF40 1166 aa27.73■■■□□ 2.03
ATPAF1-202ENST00000371937 ACBD6Q9BR61 282 aa27.73■■■□□ 2.03
ATPAF1-202ENST00000371937 MRPL9Q9BYD2 267 aaKnown RBP27.73■■■□□ 2.03
ATPAF1-202ENST00000371937 SMARCAL1Q9NZC9 954 aa27.73■■■□□ 2.03
ATPAF1-202ENST00000371937 TRAPPC3O43617 180 aa27.72■■■□□ 2.03
ATPAF1-202ENST00000371937 B4GALT3O60512 393 aa27.72■■■□□ 2.03
ATPAF1-202ENST00000371937 RGS7P49802 495 aa27.72■■■□□ 2.03
ATPAF1-202ENST00000371937 PLCB3Q01970 1234 aa27.72■■■□□ 2.03
ATPAF1-202ENST00000371937 MDH1BQ5I0G3 518 aa27.72■■■□□ 2.03
ATPAF1-202ENST00000371937 DCAF12L1Q5VU92 463 aa27.72■■■□□ 2.03
ATPAF1-202ENST00000371937 ZDHHC17Q8IUH5 632 aa27.72■■■□□ 2.03
ATPAF1-202ENST00000371937 NAP1L3Q99457 506 aaPredicted RBP27.72■■■□□ 2.03
ATPAF1-202ENST00000371937 PLVAPQ9BX97 442 aa27.72■■■□□ 2.03
ATPAF1-202ENST00000371937 DUSP16Q9BY84 665 aa27.72■■■□□ 2.03
ATPAF1-202ENST00000371937 PCDHB8Q9UN66 801 aa27.72■■■□□ 2.03
ATPAF1-202ENST00000371937 ITGB1P05556 798 aa27.71■■■□□ 2.03
ATPAF1-202ENST00000371937 RFC1P35251 1148 aaPredicted RBP27.71■■■□□ 2.03
ATPAF1-202ENST00000371937 ACADSBP45954 432 aa27.71■■■□□ 2.03
ATPAF1-202ENST00000371937 FAM102AQ5T9C2 384 aaPredicted RBP27.71■■■□□ 2.03
ATPAF1-202ENST00000371937 OR6B2Q6IFH4 312 aa27.71■■■□□ 2.03
ATPAF1-202ENST00000371937 CPNE8Q86YQ8 564 aa27.71■■■□□ 2.03
ATPAF1-202ENST00000371937 THEM5Q8N1Q8 247 aa27.71■■■□□ 2.03
ATPAF1-202ENST00000371937 NIPA2Q8N8Q9 360 aa27.71■■■□□ 2.03
ATPAF1-202ENST00000371937 HSFY1Q96LI6 401 aa27.71■■■□□ 2.03
ATPAF1-202ENST00000371937 RNPC3Q96LT9 517 aaKnown RBP27.71■■■□□ 2.03
ATPAF1-202ENST00000371937 CRTAC1Q9NQ79 661 aa27.71■■■□□ 2.03
ATPAF1-202ENST00000371937 METTL5Q9NRN9 209 aaKnown RBP27.71■■■□□ 2.03
ATPAF1-202ENST00000371937 TULP2O00295 520 aa27.71■■■□□ 2.03
ATPAF1-202ENST00000371937 RNASE9P60153 205 aaKnown RBP27.71■■■□□ 2.03
ATPAF1-202ENST00000371937 KIAA0319Q5VV43 1072 aa27.71■■■□□ 2.03
ATPAF1-202ENST00000371937 OVOS1Q6IE37 1185 aa27.71■■■□□ 2.03
ATPAF1-202ENST00000371937 RHOT1Q8IXI2 618 aa27.71■■■□□ 2.03
ATPAF1-202ENST00000371937 MMGT1Q8N4V1 131 aa27.71■■■□□ 2.03
ATPAF1-202ENST00000371937 MED10Q9BTT4 135 aa27.71■■■□□ 2.03
ATPAF1-202ENST00000371937 XPO1O14980 1071 aaKnown RBP27.7■■■□□ 2.02
ATPAF1-202ENST00000371937 PSTPIP1O43586 416 aa27.7■■■□□ 2.02
ATPAF1-202ENST00000371937 TKTP29401 623 aaKnown RBP27.7■■■□□ 2.02
ATPAF1-202ENST00000371937 PLA2G4AP47712 749 aa27.7■■■□□ 2.02
ATPAF1-202ENST00000371937 MARCKSL1P49006 195 aa27.7■■■□□ 2.02
ATPAF1-202ENST00000371937 RPL34P49207 117 aaKnown RBP27.7■■■□□ 2.02
ATPAF1-202ENST00000371937 C2orf54Q08AI8 447 aa27.7■■■□□ 2.02
ATPAF1-202ENST00000371937 FAM183BPQ6ZVS7 135 aa27.7■■■□□ 2.02
ATPAF1-202ENST00000371937 MYCBPAPQ8TBZ2 947 aa27.7■■■□□ 2.02
ATPAF1-202ENST00000371937 DNAJB4Q9UDY4 337 aa27.7■■■□□ 2.02
ATPAF1-202ENST00000371937 NPR3P17342 541 aa27.69■■■□□ 2.02
ATPAF1-202ENST00000371937 SEL1L2Q5TEA6 688 aa27.69■■■□□ 2.02
ATPAF1-202ENST00000371937 CCDC70Q6NSX1 233 aa27.69■■■□□ 2.02
ATPAF1-202ENST00000371937 NRDE2Q9H7Z3 1164 aa27.69■■■□□ 2.02
ATPAF1-202ENST00000371937 USTQ9Y2C2 406 aa27.69■■■□□ 2.02
ATPAF1-202ENST00000371937 KIAA0100Q14667 2235 aaKnown RBP27.69■■■□□ 2.02
ATPAF1-202ENST00000371937 OGDHQ02218 1023 aa27.69■■■□□ 2.02
ATPAF1-202ENST00000371937 ZNF252P-AS1Q0IIN9 211 aa27.69■■■□□ 2.02
ATPAF1-202ENST00000371937 JOSD2Q8TAC2 188 aa27.69■■■□□ 2.02
ATPAF1-202ENST00000371937 RTP3Q9BQQ7 232 aa27.69■■■□□ 2.02
ATPAF1-202ENST00000371937 PRG3Q9Y2Y8 225 aaPredicted RBP27.69■■■□□ 2.02
ATPAF1-202ENST00000371937 MYBPHLA2RUH7 354 aa27.68■■■□□ 2.02
ATPAF1-202ENST00000371937 F8W810 466 aa27.68■■■□□ 2.02
ATPAF1-202ENST00000371937 PIK3R2O00459 728 aa27.68■■■□□ 2.02
ATPAF1-202ENST00000371937 TADA2AO75478 443 aa27.68■■■□□ 2.02
ATPAF1-202ENST00000371937 TIMP1P01033 207 aa27.68■■■□□ 2.02
ATPAF1-202ENST00000371937 FGGP02679 453 aa27.68■■■□□ 2.02
ATPAF1-202ENST00000371937 ALDH2P05091 517 aa27.68■■■□□ 2.02
ATPAF1-202ENST00000371937 FAM200BP0CF97 657 aa27.68■■■□□ 2.02
ATPAF1-202ENST00000371937 PSMA2P25787 234 aa27.68■■■□□ 2.02
ATPAF1-202ENST00000371937 SLC6A3Q01959 620 aa27.68■■■□□ 2.02
ATPAF1-202ENST00000371937 YWHAHQ04917 246 aaPredicted RBP27.68■■■□□ 2.02
ATPAF1-202ENST00000371937 ACAP1Q15027 740 aa27.68■■■□□ 2.02
ATPAF1-202ENST00000371937 PAQR9Q6ZVX9 377 aa27.68■■■□□ 2.02
ATPAF1-202ENST00000371937 PCED1BQ96HM7 432 aa27.68■■■□□ 2.02
ATPAF1-202ENST00000371937 COLEC11Q9BWP8 271 aa27.68■■■□□ 2.02
ATPAF1-202ENST00000371937 B3GNT5Q9BYG0 378 aa27.68■■■□□ 2.02
ATPAF1-202ENST00000371937 RBM12Q9NTZ6 932 aaKnown RBP27.68■■■□□ 2.02
ATPAF1-202ENST00000371937 TMEM59LQ9UK28 342 aa27.68■■■□□ 2.02
ATPAF1-202ENST00000371937 CLDN5O00501 218 aa27.67■■■□□ 2.02
ATPAF1-202ENST00000371937 SSR1P43307 286 aaKnown RBP27.67■■■□□ 2.02
ATPAF1-202ENST00000371937 ZNF211Q13398 564 aaPredicted RBP27.67■■■□□ 2.02
ATPAF1-202ENST00000371937 MAPRE1Q15691 268 aaKnown RBP27.67■■■□□ 2.02
ATPAF1-202ENST00000371937 INTS6LQ5JSJ4 861 aaKnown RBP27.67■■■□□ 2.02
ATPAF1-202ENST00000371937 CC2D1AQ6P1N0 951 aaPredicted RBP27.67■■■□□ 2.02
ATPAF1-202ENST00000371937 OLFML1Q6UWY5 402 aa27.67■■■□□ 2.02
ATPAF1-202ENST00000371937 SCUBE3Q8IX30 993 aa27.67■■■□□ 2.02
ATPAF1-202ENST00000371937 ANKRD7Q92527 254 aa27.67■■■□□ 2.02
ATPAF1-202ENST00000371937 TBKBP1A7MCY6 615 aa27.67■■■□□ 2.02
ATPAF1-202ENST00000371937 F8VP50 259 aa27.67■■■□□ 2.02
ATPAF1-202ENST00000371937 SCNN1AP37088 669 aa27.67■■■□□ 2.02
ATPAF1-202ENST00000371937 GATMP50440 423 aa27.67■■■□□ 2.02
ATPAF1-202ENST00000371937 LONRF2Q1L5Z9 754 aa27.67■■■□□ 2.02
ATPAF1-202ENST00000371937 LRRC38Q5VT99 294 aa27.67■■■□□ 2.02
ATPAF1-202ENST00000371937 FAM171BQ6P995 826 aa27.67■■■□□ 2.02
ATPAF1-202ENST00000371937 TMEM175Q9BSA9 504 aa27.67■■■□□ 2.02
ATPAF1-202ENST00000371937 TSC2P49815 1807 aa27.66■■■□□ 2.02
ATPAF1-202ENST00000371937 NRP1O14786 923 aa27.66■■■□□ 2.02
ATPAF1-202ENST00000371937 KIAA0355O15063 1070 aa27.66■■■□□ 2.02
ATPAF1-202ENST00000371937 PAPSS1O43252 624 aaPredicted RBP27.66■■■□□ 2.02
ATPAF1-202ENST00000371937 PYGMP11217 842 aa27.66■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms