RNA–Protein interactions for RNA: ENST00000371146.5

USP1-202, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP1, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-202ENST00000371146 RHOBTB3O94955 611 aa7.43□□□□□ -1.22
USP1-202ENST00000371146 IL9P15248 144 aa7.43□□□□□ -1.22
USP1-202ENST00000371146 GNA15P30679 374 aa7.43□□□□□ -1.22
USP1-202ENST00000371146 FMO5P49326 533 aa7.43□□□□□ -1.22
USP1-202ENST00000371146 COPB1P53618 953 aaKnown RBP7.43□□□□□ -1.22
USP1-202ENST00000371146 GTF2BQ00403 316 aa7.43□□□□□ -1.22
USP1-202ENST00000371146 ROR1Q01973 937 aa7.43□□□□□ -1.22
USP1-202ENST00000371146 DRAP1Q14919 205 aaPredicted RBP7.43□□□□□ -1.22
USP1-202ENST00000371146 SGSM1Q2NKQ1 1148 aa7.43□□□□□ -1.22
USP1-202ENST00000371146 DCAF6Q58WW2 860 aa7.43□□□□□ -1.22
USP1-202ENST00000371146 TEX35Q5T0J7 233 aa7.43□□□□□ -1.22
USP1-202ENST00000371146 SPATA1Q5VX52 437 aa7.43□□□□□ -1.22
USP1-202ENST00000371146 TDRD10Q5VZ19 366 aaKnown RBP7.43□□□□□ -1.22
USP1-202ENST00000371146 LRRC55Q6ZSA7 311 aa7.43□□□□□ -1.22
USP1-202ENST00000371146 BRSK2Q8IWQ3 736 aa7.43□□□□□ -1.22
USP1-202ENST00000371146 ADSSL1Q8N142 457 aa7.43□□□□□ -1.22
USP1-202ENST00000371146 ARL14EPQ8N8R7 260 aaPredicted RBP7.43□□□□□ -1.22
USP1-202ENST00000371146 DDX27Q96GQ7 796 aaKnown RBP7.43□□□□□ -1.22
USP1-202ENST00000371146 TNIP3Q96KP6 325 aa7.43□□□□□ -1.22
USP1-202ENST00000371146 CCDC42Q96M95 316 aa7.43□□□□□ -1.22
USP1-202ENST00000371146 HAPLN2Q9GZV7 340 aa7.43□□□□□ -1.22
USP1-202ENST00000371146 KIAA1586Q9HCI6 787 aa7.43□□□□□ -1.22
USP1-202ENST00000371146 GKN1Q9NS71 199 aa7.43□□□□□ -1.22
USP1-202ENST00000371146 CISHQ9NSE2 258 aa7.43□□□□□ -1.22
USP1-202ENST00000371146 L1RE1Q9UN81 338 aa7.43□□□□□ -1.22
USP1-202ENST00000371146 CACNA1BQ00975 2339 aa7.43□□□□□ -1.22
USP1-202ENST00000371146 XYLBO75191 536 aa7.43□□□□□ -1.22
USP1-202ENST00000371146 BAIAP3O94812 1187 aa7.43□□□□□ -1.22
USP1-202ENST00000371146 SNUPNO95149 360 aaKnown RBP7.43□□□□□ -1.22
USP1-202ENST00000371146 LYPLA2O95372 231 aa7.43□□□□□ -1.22
USP1-202ENST00000371146 RPLP2P05387 115 aaKnown RBP7.43□□□□□ -1.22
USP1-202ENST00000371146 NCAM1P13591 858 aa7.43□□□□□ -1.22
USP1-202ENST00000371146 RFC2P35250 354 aa7.43□□□□□ -1.22
USP1-202ENST00000371146 MFAP3P55082 362 aa7.43□□□□□ -1.22
USP1-202ENST00000371146 SEC13P55735 322 aa7.43□□□□□ -1.22
USP1-202ENST00000371146 ELAVL2Q12926 359 aaKnown RBP7.43□□□□□ -1.22
USP1-202ENST00000371146 TMED1Q13445 227 aa7.43□□□□□ -1.22
USP1-202ENST00000371146 PPP2R5DQ14738 602 aa7.43□□□□□ -1.22
USP1-202ENST00000371146 GPNMBQ14956 572 aa7.43□□□□□ -1.22
USP1-202ENST00000371146 SURF1Q15526 300 aa7.43□□□□□ -1.22
USP1-202ENST00000371146 GOLGA7BQ2TAP0 167 aa7.43□□□□□ -1.22
USP1-202ENST00000371146 UBXN11Q5T124 520 aa7.43□□□□□ -1.22
USP1-202ENST00000371146 C4orf50Q6ZRC1 276 aa7.43□□□□□ -1.22
USP1-202ENST00000371146 DDX53Q86TM3 631 aaKnown RBP7.43□□□□□ -1.22
USP1-202ENST00000371146 PHC3Q8NDX5 983 aa7.43□□□□□ -1.22
USP1-202ENST00000371146 INTS2Q9H0H0 1204 aaKnown RBP7.43□□□□□ -1.22
USP1-202ENST00000371146 MAGEF1Q9HAY2 307 aa7.43□□□□□ -1.22
USP1-202ENST00000371146 LCMT1Q9UIC8 334 aa7.43□□□□□ -1.22
USP1-202ENST00000371146 PCDHB5Q9Y5E4 795 aa7.43□□□□□ -1.22
USP1-202ENST00000371146 CACNA1IQ9P0X4 2223 aa7.42□□□□□ -1.22
USP1-202ENST00000371146 INPPL1O15357 1258 aa7.42□□□□□ -1.22
USP1-202ENST00000371146 KIF5CO60282 957 aa7.42□□□□□ -1.22
USP1-202ENST00000371146 ADCY5O95622 1261 aa7.42□□□□□ -1.22
USP1-202ENST00000371146 PDE6CP51160 858 aa7.42□□□□□ -1.22
USP1-202ENST00000371146 ALCAMQ13740 583 aa7.42□□□□□ -1.22
USP1-202ENST00000371146 SMAD1Q15797 465 aaKnown RBP7.42□□□□□ -1.22
USP1-202ENST00000371146 SGO2Q562F6 1265 aa7.42□□□□□ -1.22
USP1-202ENST00000371146 HHATQ5VTY9 493 aa7.42□□□□□ -1.22
USP1-202ENST00000371146 RNF19BQ6ZMZ0 732 aa7.42□□□□□ -1.22
USP1-202ENST00000371146 ANKS3Q6ZW76 656 aa7.42□□□□□ -1.22
USP1-202ENST00000371146 KDELC2Q7Z4H8 507 aa7.42□□□□□ -1.22
USP1-202ENST00000371146 MYLK4Q86YV6 388 aaPredicted RBP7.42□□□□□ -1.22
USP1-202ENST00000371146 RBBP8NLQ8NC74 664 aaPredicted RBP7.42□□□□□ -1.22
USP1-202ENST00000371146 PDCD6IPQ8WUM4 868 aaKnown RBP7.42□□□□□ -1.22
USP1-202ENST00000371146 CASD1Q96PB1 797 aa7.42□□□□□ -1.22
USP1-202ENST00000371146 B3GNT5Q9BYG0 378 aa7.42□□□□□ -1.22
USP1-202ENST00000371146 RBSNQ9H1K0 784 aa7.42□□□□□ -1.22
USP1-202ENST00000371146 NSUN3Q9H649 340 aaKnown RBP7.42□□□□□ -1.22
USP1-202ENST00000371146 RETREG1Q9H6L5 497 aa7.42□□□□□ -1.22
USP1-202ENST00000371146 CTTNBP2NLQ9P2B4 639 aa7.42□□□□□ -1.22
USP1-202ENST00000371146 V9GYY5 206 aaPredicted RBP7.42□□□□□ -1.22
USP1-202ENST00000371146 OTOFQ9HC10 1997 aa7.42□□□□□ -1.22
USP1-202ENST00000371146 TGM5O43548 720 aa7.42□□□□□ -1.22
USP1-202ENST00000371146 CREB3O43889 395 aa7.42□□□□□ -1.22
USP1-202ENST00000371146 IL18RAPO95256 599 aa7.42□□□□□ -1.22
USP1-202ENST00000371146 BMP6P22004 513 aa7.42□□□□□ -1.22
USP1-202ENST00000371146 ITKQ08881 620 aa7.42□□□□□ -1.22
USP1-202ENST00000371146 CRYMQ14894 314 aa7.42□□□□□ -1.22
USP1-202ENST00000371146 SPA17Q15506 151 aa7.42□□□□□ -1.22
USP1-202ENST00000371146 TRIM71Q2Q1W2 868 aaKnown RBP7.42□□□□□ -1.22
USP1-202ENST00000371146 STXBP5Q5T5C0 1151 aa7.42□□□□□ -1.22
USP1-202ENST00000371146 DEFB119Q8N690 84 aa7.42□□□□□ -1.22
USP1-202ENST00000371146 EMC1Q8N766 993 aa7.42□□□□□ -1.22
USP1-202ENST00000371146 ZNF366Q8N895 744 aa7.42□□□□□ -1.22
USP1-202ENST00000371146 ARMC2Q8NEN0 867 aa7.42□□□□□ -1.22
USP1-202ENST00000371146 ENGASEQ8NFI3 743 aa7.42□□□□□ -1.22
USP1-202ENST00000371146 MYLPFQ96A32 169 aa7.42□□□□□ -1.22
USP1-202ENST00000371146 TIPINQ9BVW5 301 aa7.42□□□□□ -1.22
USP1-202ENST00000371146 TMEM134Q9H6X4 195 aa7.42□□□□□ -1.22
USP1-202ENST00000371146 OLFML3Q9NRN5 406 aa7.42□□□□□ -1.22
USP1-202ENST00000371146 HMGXB4Q9UGU5 601 aa7.42□□□□□ -1.22
USP1-202ENST00000371146 FHOD1Q9Y613 1164 aa7.42□□□□□ -1.22
USP1-202ENST00000371146 PTPRJQ12913 1337 aa7.42□□□□□ -1.22
USP1-202ENST00000371146 MYO18AQ92614 2054 aaKnown RBP7.42□□□□□ -1.22
USP1-202ENST00000371146 TCF20Q9UGU0 1960 aaKnown RBP7.42□□□□□ -1.22
USP1-202ENST00000371146 TTC3P53804 2025 aa7.42□□□□□ -1.22
USP1-202ENST00000371146 SLC12A8A0AV02 714 aa7.41□□□□□ -1.22
USP1-202ENST00000371146 H7C4K7 107 aa7.41□□□□□ -1.22
USP1-202ENST00000371146 ZSCAN9O15535 394 aaPredicted RBP7.41□□□□□ -1.22
USP1-202ENST00000371146 KLRC4O43908 158 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms