RNA–Protein interactions for RNA: ENST00000370885.8

EXOSC1-202, Transcript of exosome component 1, humanhuman

TSL 3 BASIC

Gene EXOSC1, Length 718 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-202ENST00000370885 MAPK8IP1Q9UQF2 711 aa11.75□□□□□ -0.53
EXOSC1-202ENST00000370885 A0A1W2PQ27 194 aa11.74□□□□□ -0.53
EXOSC1-202ENST00000370885 A0A1W2PQ64 194 aa11.74□□□□□ -0.53
EXOSC1-202ENST00000370885 A0A1W2PQD8 194 aa11.74□□□□□ -0.53
EXOSC1-202ENST00000370885 C2orf78A6NCI8 922 aa11.74□□□□□ -0.53
EXOSC1-202ENST00000370885 TACC1O75410 805 aa11.74□□□□□ -0.53
EXOSC1-202ENST00000370885 RHOBTB3O94955 611 aa11.74□□□□□ -0.53
EXOSC1-202ENST00000370885 FGF19O95750 216 aa11.74□□□□□ -0.53
EXOSC1-202ENST00000370885 STAU1O95793 577 aaKnown RBP11.74□□□□□ -0.53
EXOSC1-202ENST00000370885 NR3C1P04150 777 aa11.74□□□□□ -0.53
EXOSC1-202ENST00000370885 CSH1P0DML2 217 aa11.74□□□□□ -0.53
EXOSC1-202ENST00000370885 CSH2P0DML3 217 aa11.74□□□□□ -0.53
EXOSC1-202ENST00000370885 PCSK1P29120 753 aa11.74□□□□□ -0.53
EXOSC1-202ENST00000370885 GNL1P36915 607 aaPredicted RBP11.74□□□□□ -0.53
EXOSC1-202ENST00000370885 MAGEA11P43364 429 aa11.74□□□□□ -0.53
EXOSC1-202ENST00000370885 RPS9P46781 194 aaKnown RBP11.74□□□□□ -0.53
EXOSC1-202ENST00000370885 CSTF1Q05048 431 aaKnown RBP11.74□□□□□ -0.53
EXOSC1-202ENST00000370885 PSMD2Q13200 908 aa11.74□□□□□ -0.53
EXOSC1-202ENST00000370885 ZSCAN23Q3MJ62 389 aa11.74□□□□□ -0.53
EXOSC1-202ENST00000370885 ARHGAP15Q53QZ3 475 aa11.74□□□□□ -0.53
EXOSC1-202ENST00000370885 MDH1BQ5I0G3 518 aa11.74□□□□□ -0.53
EXOSC1-202ENST00000370885 Q6ZS52 159 aa11.74□□□□□ -0.53
EXOSC1-202ENST00000370885 PAQR9Q6ZVX9 377 aa11.74□□□□□ -0.53
EXOSC1-202ENST00000370885 MON1AQ86VX9 555 aa11.74□□□□□ -0.53
EXOSC1-202ENST00000370885 SPATA2LQ8IUW3 424 aaPredicted RBP11.74□□□□□ -0.53
EXOSC1-202ENST00000370885 MYCBPAPQ8TBZ2 947 aa11.74□□□□□ -0.53
EXOSC1-202ENST00000370885 BPIFB1Q8TDL5 484 aa11.74□□□□□ -0.53
EXOSC1-202ENST00000370885 NELL1Q92832 810 aa11.74□□□□□ -0.53
EXOSC1-202ENST00000370885 NKD2Q969F2 451 aaPredicted RBP11.74□□□□□ -0.53
EXOSC1-202ENST00000370885 E2F7Q96AV8 911 aa11.74□□□□□ -0.53
EXOSC1-202ENST00000370885 TRMT2BQ96GJ1 504 aaKnown RBP11.74□□□□□ -0.53
EXOSC1-202ENST00000370885 FUBP3Q96I24 572 aaKnown RBP eCLIP11.74□□□□□ -0.53
EXOSC1-202ENST00000370885 NELL2Q99435 816 aa11.74□□□□□ -0.53
EXOSC1-202ENST00000370885 FAM83CQ9BQN1 747 aa11.74□□□□□ -0.53
EXOSC1-202ENST00000370885 B3GNT5Q9BYG0 378 aa11.74□□□□□ -0.53
EXOSC1-202ENST00000370885 CHRDQ9H2X0 955 aa11.74□□□□□ -0.53
EXOSC1-202ENST00000370885 LMAN1LQ9HAT1 526 aa11.74□□□□□ -0.53
EXOSC1-202ENST00000370885 GKN1Q9NS71 199 aa11.74□□□□□ -0.53
EXOSC1-202ENST00000370885 OBP2AQ9NY56 170 aa11.74□□□□□ -0.53
EXOSC1-202ENST00000370885 GCNT4Q9P109 453 aa11.74□□□□□ -0.53
EXOSC1-202ENST00000370885 CGNQ9P2M7 1197 aaKnown RBP11.74□□□□□ -0.53
EXOSC1-202ENST00000370885 NXF1Q9UBU9 619 aaKnown RBP11.74□□□□□ -0.53
EXOSC1-202ENST00000370885 USP25Q9UHP3 1055 aa11.74□□□□□ -0.53
EXOSC1-202ENST00000370885 DNAH14Q0VDD8 3507 aa11.74□□□□□ -0.53
EXOSC1-202ENST00000370885 SPECC1L-ADORA2AF8WAN1 911 aa11.73□□□□□ -0.53
EXOSC1-202ENST00000370885 PDXKO00764 312 aa11.73□□□□□ -0.53
EXOSC1-202ENST00000370885 AKAP3O75969 853 aa11.73□□□□□ -0.53
EXOSC1-202ENST00000370885 ZNF202O95125 648 aa11.73□□□□□ -0.53
EXOSC1-202ENST00000370885 ARSAP15289 507 aa11.73□□□□□ -0.53
EXOSC1-202ENST00000370885 PTPN1P18031 435 aaKnown RBP11.73□□□□□ -0.53
EXOSC1-202ENST00000370885 CTHP32929 405 aa11.73□□□□□ -0.53
EXOSC1-202ENST00000370885 RPL10AP62906 217 aaKnown RBP11.73□□□□□ -0.53
EXOSC1-202ENST00000370885 CYP27A1Q02318 531 aa11.73□□□□□ -0.53
EXOSC1-202ENST00000370885 ORC1Q13415 861 aa11.73□□□□□ -0.53
EXOSC1-202ENST00000370885 TAF12Q16514 161 aa11.73□□□□□ -0.53
EXOSC1-202ENST00000370885 ZCWPW2Q504Y3 356 aa11.73□□□□□ -0.53
EXOSC1-202ENST00000370885 SPOPLQ6IQ16 392 aa11.73□□□□□ -0.53
EXOSC1-202ENST00000370885 PKN3Q6P5Z2 889 aa11.73□□□□□ -0.53
EXOSC1-202ENST00000370885 YAF2Q8IY57 180 aa11.73□□□□□ -0.53
EXOSC1-202ENST00000370885 SMYD4Q8IYR2 804 aaPredicted RBP11.73□□□□□ -0.53
EXOSC1-202ENST00000370885 ADSSL1Q8N142 457 aa11.73□□□□□ -0.53
EXOSC1-202ENST00000370885 ARL14EPQ8N8R7 260 aaPredicted RBP11.73□□□□□ -0.53
EXOSC1-202ENST00000370885 OR6B3Q8NGW1 331 aa11.73□□□□□ -0.53
EXOSC1-202ENST00000370885 ERCC4Q92889 916 aaPredicted RBP11.73□□□□□ -0.53
EXOSC1-202ENST00000370885 ZNF518BQ9C0D4 1074 aa11.73□□□□□ -0.53
EXOSC1-202ENST00000370885 VRTNQ9H8Y1 702 aa11.73□□□□□ -0.53
EXOSC1-202ENST00000370885 GRPEL1Q9HAV7 217 aa11.73□□□□□ -0.53
EXOSC1-202ENST00000370885 FBRSL1Q9HCM7 1045 aaKnown RBP11.73□□□□□ -0.53
EXOSC1-202ENST00000370885 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.73□□□□□ -0.539e-10■■■■■ 86.9
EXOSC1-202ENST00000370885 PRMT8Q9NR22 394 aaPredicted RBP11.73□□□□□ -0.53
EXOSC1-202ENST00000370885 TDP1Q9NUW8 608 aa11.73□□□□□ -0.53
EXOSC1-202ENST00000370885 TMEM63CQ9P1W3 806 aa11.73□□□□□ -0.53
EXOSC1-202ENST00000370885 MAGEC2Q9UBF1 373 aaPredicted RBP11.73□□□□□ -0.53
EXOSC1-202ENST00000370885 HMGXB4Q9UGU5 601 aa11.73□□□□□ -0.53
EXOSC1-202ENST00000370885 TRAF3IP3Q9Y228 551 aa11.73□□□□□ -0.53
EXOSC1-202ENST00000370885 ATG2BQ96BY7 2078 aa11.72□□□□□ -0.53
EXOSC1-202ENST00000370885 ANTXRLA6NF34 631 aa11.72□□□□□ -0.53
EXOSC1-202ENST00000370885 F8VP50 259 aa11.72□□□□□ -0.53
EXOSC1-202ENST00000370885 MAN2B1O00754 1011 aa11.72□□□□□ -0.53
EXOSC1-202ENST00000370885 DPYSL4O14531 572 aa11.72□□□□□ -0.53
EXOSC1-202ENST00000370885 LAMTOR5O43504 91 aa11.72□□□□□ -0.53
EXOSC1-202ENST00000370885 TRIM49P0CI25 452 aa11.72□□□□□ -0.53
EXOSC1-202ENST00000370885 TRIM49CP0CI26 452 aa11.72□□□□□ -0.53
EXOSC1-202ENST00000370885 PGFP49763 221 aa11.72□□□□□ -0.53
EXOSC1-202ENST00000370885 KPNA1P52294 538 aaPredicted RBP11.72□□□□□ -0.53
EXOSC1-202ENST00000370885 MLLT6P55198 1093 aaPredicted RBP11.72□□□□□ -0.53
EXOSC1-202ENST00000370885 UBE2HP62256 183 aa11.72□□□□□ -0.53
EXOSC1-202ENST00000370885 SATB1Q01826 763 aa11.72□□□□□ -0.53
EXOSC1-202ENST00000370885 PPP3CAQ08209 521 aa11.72□□□□□ -0.53
EXOSC1-202ENST00000370885 DMWDQ09019 674 aa11.72□□□□□ -0.53
EXOSC1-202ENST00000370885 NCOA4Q13772 614 aa11.72□□□□□ -0.53
EXOSC1-202ENST00000370885 PON2Q15165 354 aa11.72□□□□□ -0.53
EXOSC1-202ENST00000370885 ZACNQ401N2 412 aa11.72□□□□□ -0.53
EXOSC1-202ENST00000370885 ARHGAP29Q52LW3 1261 aa11.72□□□□□ -0.53
EXOSC1-202ENST00000370885 SCARA5Q6ZMJ2 495 aa11.72□□□□□ -0.53
EXOSC1-202ENST00000370885 SV2AQ7L0J3 742 aa11.72□□□□□ -0.53
EXOSC1-202ENST00000370885 FMR1NBQ8N0W7 255 aaPredicted RBP11.72□□□□□ -0.53
EXOSC1-202ENST00000370885 DCLK2Q8N568 766 aa11.72□□□□□ -0.53
EXOSC1-202ENST00000370885 CELF5Q8N6W0 485 aaKnown RBP11.72□□□□□ -0.53
EXOSC1-202ENST00000370885 SUMF1Q8NBK3 374 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms