RNA–Protein interactions for RNA: ENST00000369746.2

UBE3D-202, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 2,740 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-202ENST00000369746 PLEKHM3Q6ZWE6 761 aa5.33□□□□□ -1.56
UBE3D-202ENST00000369746 GPR142Q7Z601 462 aa5.33□□□□□ -1.56
UBE3D-202ENST00000369746 CNTD1Q8N815 330 aa5.33□□□□□ -1.56
UBE3D-202ENST00000369746 SEPT1Q8WYJ6 367 aa5.33□□□□□ -1.56
UBE3D-202ENST00000369746 NCLNQ969V3 563 aa5.33□□□□□ -1.56
UBE3D-202ENST00000369746 PABPC5Q96DU9 382 aaKnown RBP5.33□□□□□ -1.56
UBE3D-202ENST00000369746 SGCZQ96LD1 299 aa5.33□□□□□ -1.56
UBE3D-202ENST00000369746 RIOK1Q9BRS2 568 aaKnown RBP5.33□□□□□ -1.56
UBE3D-202ENST00000369746 RTKNQ9BST9 563 aa5.33□□□□□ -1.56
UBE3D-202ENST00000369746 PI4K2AQ9BTU6 479 aa5.33□□□□□ -1.56
UBE3D-202ENST00000369746 MENTQ9BUN1 341 aa5.33□□□□□ -1.56
UBE3D-202ENST00000369746 LSM14BQ9BX40 385 aaKnown RBP5.33□□□□□ -1.56
UBE3D-202ENST00000369746 ACPTQ9BZG2 426 aa5.33□□□□□ -1.56
UBE3D-202ENST00000369746 SERHL2Q9H4I8 314 aa5.33□□□□□ -1.56
UBE3D-202ENST00000369746 EHD1Q9H4M9 534 aa5.33□□□□□ -1.56
UBE3D-202ENST00000369746 XAB2Q9HCS7 855 aaKnown RBP5.33□□□□□ -1.56
UBE3D-202ENST00000369746 FAM153AQ9UHL3 310 aa5.33□□□□□ -1.56
UBE3D-202ENST00000369746 TEKT2Q9UIF3 430 aa5.33□□□□□ -1.56
UBE3D-202ENST00000369746 RRP7AQ9Y3A4 280 aaKnown RBP5.33□□□□□ -1.56
UBE3D-202ENST00000369746 C5orf60A6NFR6 353 aa5.33□□□□□ -1.56
UBE3D-202ENST00000369746 CHURC1-FNTBB4DL54 471 aa5.33□□□□□ -1.56
UBE3D-202ENST00000369746 N4BP3O15049 544 aa5.33□□□□□ -1.56
UBE3D-202ENST00000369746 CETN3O15182 167 aa5.33□□□□□ -1.56
UBE3D-202ENST00000369746 LRP3O75074 770 aa5.33□□□□□ -1.56
UBE3D-202ENST00000369746 TSC22D2O75157 780 aa5.33□□□□□ -1.56
UBE3D-202ENST00000369746 PIAS2O75928 621 aa5.33□□□□□ -1.56
UBE3D-202ENST00000369746 SEC24DO94855 1032 aaPredicted RBP5.33□□□□□ -1.56
UBE3D-202ENST00000369746 RB1P06400 928 aa5.33□□□□□ -1.56
UBE3D-202ENST00000369746 SUPT20HL2P0C7V6 817 aa5.33□□□□□ -1.56
UBE3D-202ENST00000369746 SYN1P17600 705 aa5.33□□□□□ -1.56
UBE3D-202ENST00000369746 PSMA4P25789 261 aaKnown RBP5.33□□□□□ -1.56
UBE3D-202ENST00000369746 HIBADHP31937 336 aaKnown RBP5.33□□□□□ -1.56
UBE3D-202ENST00000369746 CSTF2P33240 577 aaKnown RBP eCLIP5.33□□□□□ -1.56
UBE3D-202ENST00000369746 HADHBP55084 474 aaKnown RBP5.33□□□□□ -1.56
UBE3D-202ENST00000369746 MTTPP55157 894 aa5.33□□□□□ -1.56
UBE3D-202ENST00000369746 ERVK-9P63128 1117 aa5.33□□□□□ -1.56
UBE3D-202ENST00000369746 ERVK-24P63145 666 aa5.33□□□□□ -1.56
UBE3D-202ENST00000369746 ELF3P78545 371 aaPredicted RBP5.33□□□□□ -1.56
UBE3D-202ENST00000369746 CYP4F8P98187 520 aa5.33□□□□□ -1.56
UBE3D-202ENST00000369746 PLCB3Q01970 1234 aa5.33□□□□□ -1.56
UBE3D-202ENST00000369746 SIGLEC14Q08ET2 396 aa5.33□□□□□ -1.56
UBE3D-202ENST00000369746 BMPR2Q13873 1038 aa5.33□□□□□ -1.56
UBE3D-202ENST00000369746 IKBKEQ14164 716 aa5.33□□□□□ -1.56
UBE3D-202ENST00000369746 GEN1Q17RS7 908 aa5.33□□□□□ -1.56
UBE3D-202ENST00000369746 KRTCAP3Q53RY4 240 aa5.33□□□□□ -1.56
UBE3D-202ENST00000369746 ANKRD20A8PQ5CZ79 823 aa5.33□□□□□ -1.56
UBE3D-202ENST00000369746 KRBOX4Q5JUW0 171 aa5.33□□□□□ -1.56
UBE3D-202ENST00000369746 PERM1Q5SV97 790 aa5.33□□□□□ -1.56
UBE3D-202ENST00000369746 ZMYM1Q5SVZ6 1142 aa5.33□□□□□ -1.56
UBE3D-202ENST00000369746 IL23RQ5VWK5 629 aa5.33□□□□□ -1.56
UBE3D-202ENST00000369746 DAB2IPQ5VWQ8 1189 aa5.33□□□□□ -1.56
UBE3D-202ENST00000369746 ELMSAN1Q6PJG2 1045 aa5.33□□□□□ -1.56
UBE3D-202ENST00000369746 PPP1R21Q6ZMI0 780 aa5.33□□□□□ -1.56
UBE3D-202ENST00000369746 KDM7AQ6ZMT4 941 aa5.33□□□□□ -1.56
UBE3D-202ENST00000369746 CACNA2D4Q7Z3S7 1137 aa5.33□□□□□ -1.56
UBE3D-202ENST00000369746 SLC22A8Q8TCC7 542 aa5.33□□□□□ -1.56
UBE3D-202ENST00000369746 PANK1Q8TE04 598 aa5.33□□□□□ -1.56
UBE3D-202ENST00000369746 BCL7CQ8WUZ0 217 aaPredicted RBP5.33□□□□□ -1.56
UBE3D-202ENST00000369746 WDR60Q8WVS4 1066 aa5.33□□□□□ -1.56
UBE3D-202ENST00000369746 CDKL2Q92772 493 aa5.33□□□□□ -1.56
UBE3D-202ENST00000369746 PTPRN2Q92932 1015 aa5.33□□□□□ -1.56
UBE3D-202ENST00000369746 FGD4Q96M96 766 aa5.33□□□□□ -1.56
UBE3D-202ENST00000369746 NT5C1BQ96P26 610 aa5.33□□□□□ -1.56
UBE3D-202ENST00000369746 TUBGCP5Q96RT8 1024 aa5.33□□□□□ -1.56
UBE3D-202ENST00000369746 TIPINQ9BVW5 301 aa5.33□□□□□ -1.56
UBE3D-202ENST00000369746 SMARCAD1Q9H4L7 1026 aa5.33□□□□□ -1.56
UBE3D-202ENST00000369746 UBE2ZQ9H832 354 aaPredicted RBP5.33□□□□□ -1.56
UBE3D-202ENST00000369746 MBIPQ9NS73 344 aa5.33□□□□□ -1.56
UBE3D-202ENST00000369746 TBC1D29Q9UFV1 150 aa5.33□□□□□ -1.56
UBE3D-202ENST00000369746 ATPIF1Q9UII2 106 aa5.33□□□□□ -1.56
UBE3D-202ENST00000369746 TSPYL4Q9UJ04 414 aa5.33□□□□□ -1.56
UBE3D-202ENST00000369746 SCAF8Q9UPN6 1271 aaKnown RBP5.33□□□□□ -1.56
UBE3D-202ENST00000369746 PCDHB9Q9Y5E1 797 aa5.33□□□□□ -1.56
UBE3D-202ENST00000369746 AP1M2Q9Y6Q5 423 aa5.33□□□□□ -1.56
UBE3D-202ENST00000369746 CTAGE9A4FU28 777 aa5.32□□□□□ -1.56
UBE3D-202ENST00000369746 RGSL1A5PLK6 1076 aa5.32□□□□□ -1.56
UBE3D-202ENST00000369746 KRT87PA6NCN2 255 aa5.32□□□□□ -1.56
UBE3D-202ENST00000369746 GSG1L2A8MUP6 293 aa5.32□□□□□ -1.56
UBE3D-202ENST00000369746 PITPNM1O00562 1244 aa5.32□□□□□ -1.56
UBE3D-202ENST00000369746 RNF113AO15541 343 aaKnown RBP5.32□□□□□ -1.56
UBE3D-202ENST00000369746 N4BP1O75113 896 aaKnown RBP5.32□□□□□ -1.56
UBE3D-202ENST00000369746 SLITRK5O94991 958 aa5.32□□□□□ -1.56
UBE3D-202ENST00000369746 BAG2O95816 211 aa5.32□□□□□ -1.56
UBE3D-202ENST00000369746 CAPNS1P04632 268 aa5.32□□□□□ -1.56
UBE3D-202ENST00000369746 GNAI3P08754 354 aa5.32□□□□□ -1.56
UBE3D-202ENST00000369746 EEF2P13639 858 aaKnown RBP5.32□□□□□ -1.56
UBE3D-202ENST00000369746 APEHP13798 732 aaKnown RBP5.32□□□□□ -1.56
UBE3D-202ENST00000369746 TARSP26639 723 aaKnown RBP5.32□□□□□ -1.56
UBE3D-202ENST00000369746 GNA15P30679 374 aa5.32□□□□□ -1.56
UBE3D-202ENST00000369746 ZNF165P49910 485 aa5.32□□□□□ -1.56
UBE3D-202ENST00000369746 BPIFB4P59827 614 aa5.32□□□□□ -1.56
UBE3D-202ENST00000369746 GPR85P60893 370 aa5.32□□□□□ -1.56
UBE3D-202ENST00000369746 GNGT1P63211 74 aa5.32□□□□□ -1.56
UBE3D-202ENST00000369746 ZBTB16Q05516 673 aa5.32□□□□□ -1.56
UBE3D-202ENST00000369746 ZP2Q05996 745 aa5.32□□□□□ -1.56
UBE3D-202ENST00000369746 CHRNDQ07001 517 aa5.32□□□□□ -1.56
UBE3D-202ENST00000369746 ZNF252P-AS1Q0IIN9 211 aa5.32□□□□□ -1.56
UBE3D-202ENST00000369746 HSPA14Q0VDF9 509 aa5.32□□□□□ -1.56
UBE3D-202ENST00000369746 LSAMPQ13449 338 aa5.32□□□□□ -1.56
UBE3D-202ENST00000369746 ITGA7Q13683 1181 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms