RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 GDAP1Q8TB36 358 aa5.56□□□□□ -1.52
SMNDC1-202ENST00000369603 BSNDQ8WZ55 320 aa5.56□□□□□ -1.52
SMNDC1-202ENST00000369603 FAM96AQ9H5X1 160 aa5.56□□□□□ -1.52
SMNDC1-202ENST00000369603 PFDN4Q9NQP4 134 aa5.56□□□□□ -1.52
SMNDC1-202ENST00000369603 KLC4Q9NSK0 619 aa5.56□□□□□ -1.52
SMNDC1-202ENST00000369603 SNTG2Q9NY99 539 aa5.56□□□□□ -1.52
SMNDC1-202ENST00000369603 KLK14Q9P0G3 267 aa5.56□□□□□ -1.52
SMNDC1-202ENST00000369603 USP20Q9Y2K6 914 aa5.56□□□□□ -1.52
SMNDC1-202ENST00000369603 COQ4Q9Y3A0 265 aa5.56□□□□□ -1.52
SMNDC1-202ENST00000369603 TAF1P21675 1872 aa5.56□□□□□ -1.52
SMNDC1-202ENST00000369603 CYB561D2O14569 222 aa5.56□□□□□ -1.52
SMNDC1-202ENST00000369603 TADA2AO75478 443 aa5.56□□□□□ -1.52
SMNDC1-202ENST00000369603 DCTN3O75935 186 aa5.56□□□□□ -1.52
SMNDC1-202ENST00000369603 TOMM70O94826 608 aa5.56□□□□□ -1.52
SMNDC1-202ENST00000369603 EGFRP00533 1210 aa5.56□□□□□ -1.52
SMNDC1-202ENST00000369603 PYGMP11217 842 aa5.56□□□□□ -1.52
SMNDC1-202ENST00000369603 AARSP49588 968 aaKnown RBP eCLIP5.56□□□□□ -1.52
SMNDC1-202ENST00000369603 POU5F1Q01860 360 aaKnown RBP5.56□□□□□ -1.52
SMNDC1-202ENST00000369603 CNGA2Q16280 664 aa5.56□□□□□ -1.52
SMNDC1-202ENST00000369603 C2CD6Q53TS8 623 aa5.56□□□□□ -1.52
SMNDC1-202ENST00000369603 DCAF6Q58WW2 860 aa5.56□□□□□ -1.52
SMNDC1-202ENST00000369603 KDM7AQ6ZMT4 941 aa5.56□□□□□ -1.52
SMNDC1-202ENST00000369603 TSHZ1Q6ZSZ6 1077 aa5.56□□□□□ -1.52
SMNDC1-202ENST00000369603 PID1Q7Z2X4 250 aa5.56□□□□□ -1.52
SMNDC1-202ENST00000369603 DNAAF5Q86Y56 855 aa5.56□□□□□ -1.52
SMNDC1-202ENST00000369603 LMNTD2Q8IXW0 634 aa5.56□□□□□ -1.52
SMNDC1-202ENST00000369603 PPM1NQ8N819 430 aa5.56□□□□□ -1.52
SMNDC1-202ENST00000369603 FBXO25Q8TCJ0 367 aa5.56□□□□□ -1.52
SMNDC1-202ENST00000369603 DNAJB3Q8WWF6 145 aa5.56□□□□□ -1.52
SMNDC1-202ENST00000369603 CRYGNQ8WXF5 182 aa5.56□□□□□ -1.52
SMNDC1-202ENST00000369603 FAXDC2Q96IV6 333 aa5.56□□□□□ -1.52
SMNDC1-202ENST00000369603 C9orf72Q96LT7 481 aa5.56□□□□□ -1.52
SMNDC1-202ENST00000369603 MAGEB5Q9BZ81 275 aa5.56□□□□□ -1.52
SMNDC1-202ENST00000369603 XPNPEP1Q9NQW7 623 aa5.56□□□□□ -1.52
SMNDC1-202ENST00000369603 TAS2R14Q9NYV8 317 aa5.56□□□□□ -1.52
SMNDC1-202ENST00000369603 PSMC3IPQ9P2W1 217 aaPredicted RBP5.56□□□□□ -1.52
SMNDC1-202ENST00000369603 XPO7Q9UIA9 1087 aaKnown RBP5.56□□□□□ -1.52
SMNDC1-202ENST00000369603 USP18Q9UMW8 372 aa5.56□□□□□ -1.52
SMNDC1-202ENST00000369603 EEF2KO00418 725 aaKnown RBP5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 CSDE1O75534 798 aaKnown RBP5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 APRTP07741 180 aa5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 CPB1P15086 417 aa5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 GRIK1P39086 918 aa5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 RAP1GAPP47736 663 aa5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 DRG2P55039 364 aaKnown RBP5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 KYNUQ16719 465 aa5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 TAF1BQ53T94 588 aaPredicted RBP5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 ZBED3Q96IU2 234 aaPredicted RBP5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 VPS39Q96JC1 886 aa5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 KREMEN1Q96MU8 473 aa5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 ELAC2Q9BQ52 826 aaKnown RBP5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 FSD1LQ9BXM9 530 aa5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 TRIM55Q9BYV6 548 aa5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 DCLK3Q9C098 648 aa5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 XAB2Q9HCS7 855 aaKnown RBP5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 RRN3Q9NYV6 651 aa5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 WRAP73Q9P2S5 460 aaPredicted RBP5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 TSPAN16Q9UKR8 245 aa5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 SLC45A1Q9Y2W3 748 aa5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 DERAQ9Y315 318 aa5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 DOCK2Q92608 1830 aa5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 TUBGCP6Q96RT7 1819 aa5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 THSD7AQ9UPZ6 1657 aa5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 ATP5HO75947 161 aa5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 PIGRP01833 764 aa5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 PAX3P23760 479 aa5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 SERPINB9P50453 376 aa5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 VCPP55072 806 aaKnown RBP5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 SDCCAG8Q86SQ7 713 aaPredicted RBP5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 ARHGAP18Q8N392 663 aa5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 ARRDC4Q8NCT1 418 aa5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 OR5B17Q8NGF7 314 aa5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 HELQQ8TDG4 1101 aa5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 RXFP2Q8WXD0 754 aa5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 ATG4AQ8WYN0 398 aa5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 SEMA4DQ92854 862 aa5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 TTC1Q99614 292 aa5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 APBA2Q99767 749 aa5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 TRABDQ9H4I3 376 aa5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 PRDM16Q9HAZ2 1276 aa5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 TMBIM4Q9HC24 238 aa5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 PCDH9Q9HC56 1237 aa5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 SLC24A3Q9HC58 644 aa5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 PCYOX1Q9UHG3 505 aa5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 TRPV2Q9Y5S1 764 aa5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 SIGLEC16A6NMB1 481 aa5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 BTBD19C9JJ37 291 aa5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 AP1G2O75843 785 aa5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 B3GAT3O94766 335 aa5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 MICAL2O94851 1124 aa5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 C4BPAP04003 597 aaKnown RBP5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 RARAP10276 462 aa5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 KRT10P13645 584 aa5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 LSP1P33241 339 aa5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 GRM5P41594 1212 aa5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 HADHBP55084 474 aaKnown RBP5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 NOMO3P69849 1222 aa5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 POU5F1BQ06416 359 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms