RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 CCNE1P24864 410 aa21.9■■□□□ 1.1
SMNDC1-201ENST00000369592 RAP1GAPP47736 663 aa21.9■■□□□ 1.1
SMNDC1-201ENST00000369592 UBE2HP62256 183 aa21.9■■□□□ 1.1
SMNDC1-201ENST00000369592 FKBP3Q00688 224 aaKnown RBP21.9■■□□□ 1.1
SMNDC1-201ENST00000369592 PRKCQQ04759 706 aa21.9■■□□□ 1.1
SMNDC1-201ENST00000369592 LRRC63Q05C16 580 aa21.9■■□□□ 1.1
SMNDC1-201ENST00000369592 MLF2Q15773 248 aaPredicted RBP21.9■■□□□ 1.1
SMNDC1-201ENST00000369592 MDH1BQ5I0G3 518 aa21.9■■□□□ 1.1
SMNDC1-201ENST00000369592 SPOPLQ6IQ16 392 aa21.9■■□□□ 1.1
SMNDC1-201ENST00000369592 CLEC17AQ6ZS10 378 aa21.9■■□□□ 1.1
SMNDC1-201ENST00000369592 PAQR9Q6ZVX9 377 aa21.9■■□□□ 1.1
SMNDC1-201ENST00000369592 DHTKD1Q96HY7 919 aaPredicted RBP21.9■■□□□ 1.1
SMNDC1-201ENST00000369592 C8orf48Q96LL4 319 aa21.9■■□□□ 1.1
SMNDC1-201ENST00000369592 TRMT61BQ9BVS5 477 aaKnown RBP21.9■■□□□ 1.1
SMNDC1-201ENST00000369592 B3GNT5Q9BYG0 378 aa21.9■■□□□ 1.1
SMNDC1-201ENST00000369592 MIA3Q5JRA6 1907 aa21.9■■□□□ 1.1
SMNDC1-201ENST00000369592 CACNA1IQ9P0X4 2223 aa21.9■■□□□ 1.1
SMNDC1-201ENST00000369592 ZFHX2Q9C0A1 2572 aaPredicted RBP21.89■■□□□ 1.09
SMNDC1-201ENST00000369592 TRIM49BA6NDI0 452 aa21.89■■□□□ 1.09
SMNDC1-201ENST00000369592 A8MXQ7 604 aa21.89■■□□□ 1.09
SMNDC1-201ENST00000369592 SLC16A3O15427 465 aaKnown RBP21.89■■□□□ 1.09
SMNDC1-201ENST00000369592 GALR2O43603 387 aaPredicted RBP21.89■■□□□ 1.09
SMNDC1-201ENST00000369592 PRAMEF12O95522 483 aa21.89■■□□□ 1.09
SMNDC1-201ENST00000369592 CACNA2D1P54289 1103 aa21.89■■□□□ 1.09
SMNDC1-201ENST00000369592 INCA1Q0VD86 236 aa21.89■■□□□ 1.09
SMNDC1-201ENST00000369592 GRM2Q14416 872 aa21.89■■□□□ 1.09
SMNDC1-201ENST00000369592 ARHGAP15Q53QZ3 475 aa21.89■■□□□ 1.09
SMNDC1-201ENST00000369592 CRYBG2Q8N1P7 616 aa21.89■■□□□ 1.09
SMNDC1-201ENST00000369592 DUSP9Q99956 384 aaKnown RBP21.89■■□□□ 1.09
SMNDC1-201ENST00000369592 TTLL2Q9BWV7 592 aa21.89■■□□□ 1.09
SMNDC1-201ENST00000369592 SLITRK6Q9H5Y7 841 aa21.89■■□□□ 1.09
SMNDC1-201ENST00000369592 DDX6P26196 483 aaKnown RBP eCLIP21.88■■□□□ 1.092e-8■□□□□ 8.4
SMNDC1-201ENST00000369592 PIK3CAP42336 1068 aa21.88■■□□□ 1.09
SMNDC1-201ENST00000369592 CYP27A1Q02318 531 aa21.88■■□□□ 1.09
SMNDC1-201ENST00000369592 TTI2Q6NXR4 508 aa21.88■■□□□ 1.09
SMNDC1-201ENST00000369592 MON1AQ86VX9 555 aa21.88■■□□□ 1.09
SMNDC1-201ENST00000369592 ZNF687Q8N1G0 1237 aa21.88■■□□□ 1.09
SMNDC1-201ENST00000369592 SEMA4DQ92854 862 aa21.88■■□□□ 1.09
SMNDC1-201ENST00000369592 ATOH1Q92858 354 aaPredicted RBP21.88■■□□□ 1.09
SMNDC1-201ENST00000369592 SHDQ96IW2 340 aa21.88■■□□□ 1.09
SMNDC1-201ENST00000369592 ZNF518BQ9C0D4 1074 aa21.88■■□□□ 1.09
SMNDC1-201ENST00000369592 UXTQ9UBK9 157 aaPredicted RBP21.88■■□□□ 1.09
SMNDC1-201ENST00000369592 COQ4Q9Y3A0 265 aa21.88■■□□□ 1.09
SMNDC1-201ENST00000369592 EPB41P11171 864 aaKnown RBP21.87■■□□□ 1.09
SMNDC1-201ENST00000369592 P4HA1P13674 534 aa21.87■■□□□ 1.09
SMNDC1-201ENST00000369592 PPP1R2P41236 205 aa21.87■■□□□ 1.09
SMNDC1-201ENST00000369592 USP46P62068 366 aa21.87■■□□□ 1.09
SMNDC1-201ENST00000369592 NOP14P78316 857 aaKnown RBP21.87■■□□□ 1.09
SMNDC1-201ENST00000369592 TAF12Q16514 161 aa21.87■■□□□ 1.09
SMNDC1-201ENST00000369592 KRT39Q6A163 491 aa21.87■■□□□ 1.09
SMNDC1-201ENST00000369592 ISM2Q6H9L7 571 aa21.87■■□□□ 1.09
SMNDC1-201ENST00000369592 SCARA5Q6ZMJ2 495 aa21.87■■□□□ 1.09
SMNDC1-201ENST00000369592 UNC93AQ86WB7 457 aa21.87■■□□□ 1.09
SMNDC1-201ENST00000369592 SCN4BQ8IWT1 228 aa21.87■■□□□ 1.09
SMNDC1-201ENST00000369592 CCDC105Q8IYK2 499 aa21.87■■□□□ 1.09
SMNDC1-201ENST00000369592 CMTM8Q8IZV2 173 aa21.87■■□□□ 1.09
SMNDC1-201ENST00000369592 IRF7Q92985 503 aa21.87■■□□□ 1.09
SMNDC1-201ENST00000369592 FAXDC2Q96IV6 333 aa21.87■■□□□ 1.09
SMNDC1-201ENST00000369592 TSG101Q99816 390 aa21.87■■□□□ 1.09
SMNDC1-201ENST00000369592 OSBPL6Q9BZF3 934 aa21.87■■□□□ 1.09
SMNDC1-201ENST00000369592 ELOVL4Q9GZR5 314 aa21.87■■□□□ 1.09
SMNDC1-201ENST00000369592 CYP3A43Q9HB55 503 aa21.87■■□□□ 1.09
SMNDC1-201ENST00000369592 HMGXB4Q9UGU5 601 aa21.87■■□□□ 1.09
SMNDC1-201ENST00000369592 KANSL1LA0AUZ9 987 aa21.86■■□□□ 1.09
SMNDC1-201ENST00000369592 F8VP50 259 aa21.86■■□□□ 1.09
SMNDC1-201ENST00000369592 CLDN5O00501 218 aa21.86■■□□□ 1.09
SMNDC1-201ENST00000369592 PSMA7O14818 248 aa21.86■■□□□ 1.09
SMNDC1-201ENST00000369592 TRIM66O15016 1216 aa21.86■■□□□ 1.09
SMNDC1-201ENST00000369592 CHADO15335 359 aa21.86■■□□□ 1.09
SMNDC1-201ENST00000369592 GLULP15104 373 aa21.86■■□□□ 1.09
SMNDC1-201ENST00000369592 GDI1P31150 447 aa21.86■■□□□ 1.09
SMNDC1-201ENST00000369592 MLLT6P55198 1093 aaPredicted RBP21.86■■□□□ 1.09
SMNDC1-201ENST00000369592 TXNDC8Q6A555 127 aa21.86■■□□□ 1.09
SMNDC1-201ENST00000369592 GPIHBP1Q8IV16 184 aa21.86■■□□□ 1.09
SMNDC1-201ENST00000369592 FUKQ8N0W3 1084 aa21.86■■□□□ 1.09
SMNDC1-201ENST00000369592 PJA1Q8NG27 643 aa21.86■■□□□ 1.09
SMNDC1-201ENST00000369592 WHAMMQ8TF30 809 aa21.86■■□□□ 1.09
SMNDC1-201ENST00000369592 SLC35C1Q96A29 364 aa21.86■■□□□ 1.09
SMNDC1-201ENST00000369592 GCNAQ96QF7 691 aa21.86■■□□□ 1.09
SMNDC1-201ENST00000369592 FOXQ1Q9C009 403 aa21.86■■□□□ 1.09
SMNDC1-201ENST00000369592 BRD9Q9H8M2 597 aa21.86■■□□□ 1.09
SMNDC1-201ENST00000369592 HEBP1Q9NRV9 189 aa21.86■■□□□ 1.09
SMNDC1-201ENST00000369592 GCNT4Q9P109 453 aa21.86■■□□□ 1.09
SMNDC1-201ENST00000369592 MAGED2Q9UNF1 606 aaPredicted RBP21.86■■□□□ 1.09
SMNDC1-201ENST00000369592 GRIK1P39086 918 aa21.85■■□□□ 1.09
SMNDC1-201ENST00000369592 ANP32AP39687 249 aaKnown RBP21.85■■□□□ 1.09
SMNDC1-201ENST00000369592 NDST1P52848 882 aa21.85■■□□□ 1.09
SMNDC1-201ENST00000369592 FZD5Q13467 585 aa21.85■■□□□ 1.09
SMNDC1-201ENST00000369592 DENND5BQ6ZUT9 1274 aa21.85■■□□□ 1.09
SMNDC1-201ENST00000369592 MAB21L3Q8N8X9 362 aa21.85■■□□□ 1.09
SMNDC1-201ENST00000369592 DTWD2Q8NBA8 298 aa21.85■■□□□ 1.09
SMNDC1-201ENST00000369592 USP13Q92995 863 aaPredicted RBP21.85■■□□□ 1.09
SMNDC1-201ENST00000369592 TNIP3Q96KP6 325 aa21.85■■□□□ 1.09
SMNDC1-201ENST00000369592 CEP63Q96MT8 703 aa21.85■■□□□ 1.09
SMNDC1-201ENST00000369592 TWNKQ96RR1 684 aa21.85■■□□□ 1.09
SMNDC1-201ENST00000369592 NIF3L1Q9GZT8 377 aa21.85■■□□□ 1.09
SMNDC1-201ENST00000369592 IL37Q9NZH6 218 aa21.85■■□□□ 1.09
SMNDC1-201ENST00000369592 SIT1Q9Y3P8 196 aa21.85■■□□□ 1.09
SMNDC1-201ENST00000369592 MTF2Q9Y483 593 aaPredicted RBP21.85■■□□□ 1.09
SMNDC1-201ENST00000369592 PATJQ8NI35 1801 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms