RNA–Protein interactions for RNA: ENST00000369406.7

HMGCS2-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS2, Length 2,428 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-201ENST00000369406 TBX21Q9UL17 535 aa14.88□□□□□ -0.03
HMGCS2-201ENST00000369406 SKIP12755 728 aa14.88□□□□□ -0.03
HMGCS2-201ENST00000369406 PTPN1P18031 435 aaKnown RBP14.88□□□□□ -0.03
HMGCS2-201ENST00000369406 GSCP56915 257 aaPredicted RBP14.88□□□□□ -0.03
HMGCS2-201ENST00000369406 VSNL1P62760 191 aa14.88□□□□□ -0.03
HMGCS2-201ENST00000369406 SLC7A5Q01650 507 aa14.88□□□□□ -0.03
HMGCS2-201ENST00000369406 LRRC26Q2I0M4 334 aa14.88□□□□□ -0.03
HMGCS2-201ENST00000369406 NOMO2Q5JPE7 1267 aa14.88□□□□□ -0.03
HMGCS2-201ENST00000369406 SH3PXD2AQ5TCZ1 1133 aa14.88□□□□□ -0.03
HMGCS2-201ENST00000369406 COLGALT2Q8IYK4 626 aa14.88□□□□□ -0.03
HMGCS2-201ENST00000369406 GPR161Q8N6U8 529 aaKnown RBP14.88□□□□□ -0.03
HMGCS2-201ENST00000369406 CARD9Q9H257 536 aa14.88□□□□□ -0.03
HMGCS2-201ENST00000369406 DMGDHQ9UI17 866 aaKnown RBP14.88□□□□□ -0.03
HMGCS2-201ENST00000369406 ATP11BQ9Y2G3 1177 aa14.88□□□□□ -0.03
HMGCS2-201ENST00000369406 ZSCAN5CA6NGD5 496 aaPredicted RBP14.87□□□□□ -0.03
HMGCS2-201ENST00000369406 SIGLEC16A6NMB1 481 aa14.87□□□□□ -0.03
HMGCS2-201ENST00000369406 MIF4GDA9UHW6 222 aaKnown RBP14.87□□□□□ -0.03
HMGCS2-201ENST00000369406 PGRMC1O00264 195 aaKnown RBP14.87□□□□□ -0.03
HMGCS2-201ENST00000369406 PAPSS1O43252 624 aaPredicted RBP14.87□□□□□ -0.03
HMGCS2-201ENST00000369406 ITIH3Q06033 890 aa14.87□□□□□ -0.03
HMGCS2-201ENST00000369406 GLB1LQ6UWU2 654 aa14.87□□□□□ -0.03
HMGCS2-201ENST00000369406 SCUBE3Q8IX30 993 aa14.87□□□□□ -0.03
HMGCS2-201ENST00000369406 OR10T2Q8NGX3 314 aa14.87□□□□□ -0.03
HMGCS2-201ENST00000369406 NDRG1Q92597 394 aaKnown RBP14.87□□□□□ -0.03
HMGCS2-201ENST00000369406 PAWRQ96IZ0 340 aaKnown RBP14.87□□□□□ -0.03
HMGCS2-201ENST00000369406 CALR3Q96L12 384 aaKnown RBP14.87□□□□□ -0.03
HMGCS2-201ENST00000369406 SEZ6LQ9BYH1 1024 aa14.87□□□□□ -0.03
HMGCS2-201ENST00000369406 ADAM33Q9BZ11 813 aa14.87□□□□□ -0.03
HMGCS2-201ENST00000369406 SYNCQ9H7C4 482 aa14.87□□□□□ -0.03
HMGCS2-201ENST00000369406 UBN1Q9NPG3 1134 aa14.87□□□□□ -0.03
HMGCS2-201ENST00000369406 TMLHEQ9NVH6 421 aa14.87□□□□□ -0.03
HMGCS2-201ENST00000369406 ZNF446Q9NWS9 450 aa14.87□□□□□ -0.03
HMGCS2-201ENST00000369406 CXCL10P02778 98 aa14.87□□□□□ -0.03
HMGCS2-201ENST00000369406 KRT3P12035 628 aa14.87□□□□□ -0.03
HMGCS2-201ENST00000369406 GJC1P36383 396 aa14.87□□□□□ -0.03
HMGCS2-201ENST00000369406 PAFAH1B1P43034 410 aa14.87□□□□□ -0.03
HMGCS2-201ENST00000369406 CLCN6P51797 869 aa14.87□□□□□ -0.03
HMGCS2-201ENST00000369406 PPP1R2P3Q6NXS1 205 aa14.87□□□□□ -0.03
HMGCS2-201ENST00000369406 DCUN1D2Q6PH85 259 aa14.87□□□□□ -0.03
HMGCS2-201ENST00000369406 OLFML1Q6UWY5 402 aa14.87□□□□□ -0.03
HMGCS2-201ENST00000369406 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.87□□□□□ -0.03
HMGCS2-201ENST00000369406 ANKRD52Q8NB46 1076 aa14.87□□□□□ -0.03
HMGCS2-201ENST00000369406 RSPH1Q8WYR4 309 aa14.87□□□□□ -0.03
HMGCS2-201ENST00000369406 CASD1Q96PB1 797 aa14.87□□□□□ -0.03
HMGCS2-201ENST00000369406 KRT12Q99456 494 aa14.87□□□□□ -0.03
HMGCS2-201ENST00000369406 SELENOOQ9BVL4 669 aa14.87□□□□□ -0.03
HMGCS2-201ENST00000369406 FTHL17Q9BXU8 183 aa14.87□□□□□ -0.03
HMGCS2-201ENST00000369406 TMEM161AQ9NX61 479 aa14.87□□□□□ -0.03
HMGCS2-201ENST00000369406 M0QZQ0 153 aa14.86□□□□□ -0.03
HMGCS2-201ENST00000369406 FLT3P36888 993 aa14.86□□□□□ -0.03
HMGCS2-201ENST00000369406 PBX3P40426 434 aa14.86□□□□□ -0.03
HMGCS2-201ENST00000369406 GJA8P48165 433 aa14.86□□□□□ -0.03
HMGCS2-201ENST00000369406 ZNF268Q14587 947 aaPredicted RBP14.86□□□□□ -0.03
HMGCS2-201ENST00000369406 FAM102AQ5T9C2 384 aaPredicted RBP14.86□□□□□ -0.03
HMGCS2-201ENST00000369406 KLHL7Q8IXQ5 586 aa14.86□□□□□ -0.03
HMGCS2-201ENST00000369406 SYT15Q9BQS2 421 aa14.86□□□□□ -0.03
HMGCS2-201ENST00000369406 DDX47Q9H0S4 455 aaKnown RBP14.86□□□□□ -0.03
HMGCS2-201ENST00000369406 STRIP2Q9ULQ0 834 aa14.86□□□□□ -0.03
HMGCS2-201ENST00000369406 TTC7AQ9ULT0 858 aaPredicted RBP14.86□□□□□ -0.03
HMGCS2-201ENST00000369406 PRG3Q9Y2Y8 225 aaPredicted RBP14.86□□□□□ -0.03
HMGCS2-201ENST00000369406 SEC31AO94979 1220 aaKnown RBP14.86□□□□□ -0.03
HMGCS2-201ENST00000369406 MYBL2P10244 700 aa14.86□□□□□ -0.03
HMGCS2-201ENST00000369406 IL1R2P27930 398 aa14.86□□□□□ -0.03
HMGCS2-201ENST00000369406 BCAR1P56945 870 aa14.86□□□□□ -0.03
HMGCS2-201ENST00000369406 STILQ15468 1287 aa14.86□□□□□ -0.03
HMGCS2-201ENST00000369406 SIX1Q15475 284 aaPredicted RBP14.86□□□□□ -0.03
HMGCS2-201ENST00000369406 TRADDQ15628 312 aa14.86□□□□□ -0.03
HMGCS2-201ENST00000369406 OR6B2Q6IFH4 312 aa14.86□□□□□ -0.03
HMGCS2-201ENST00000369406 TMCO2Q7Z6W1 182 aaPredicted RBP14.86□□□□□ -0.03
HMGCS2-201ENST00000369406 TMEM110Q86TL2 294 aa14.86□□□□□ -0.03
HMGCS2-201ENST00000369406 LRRTM3Q86VH5 581 aa14.86□□□□□ -0.03
HMGCS2-201ENST00000369406 GSPT2Q8IYD1 628 aaKnown RBP14.86□□□□□ -0.03
HMGCS2-201ENST00000369406 UBL4BQ8N7F7 174 aa14.86□□□□□ -0.03
HMGCS2-201ENST00000369406 SEPT8Q92599 483 aa14.86□□□□□ -0.03
HMGCS2-201ENST00000369406 RPGRIP1Q96KN7 1286 aa14.86□□□□□ -0.03
HMGCS2-201ENST00000369406 PKMYT1Q99640 499 aa14.86□□□□□ -0.03
HMGCS2-201ENST00000369406 HNRNPABQ99729 332 aaKnown RBP14.86□□□□□ -0.03
HMGCS2-201ENST00000369406 MIS12Q9H081 205 aa14.86□□□□□ -0.03
HMGCS2-201ENST00000369406 RNF14Q9UBS8 474 aa14.86□□□□□ -0.03
HMGCS2-201ENST00000369406 IP6K2Q9UHH9 426 aa14.86□□□□□ -0.03
HMGCS2-201ENST00000369406 CCDC66A2RUB6 948 aa14.85□□□□□ -0.03
HMGCS2-201ENST00000369406 TFE3P19532 575 aaPredicted RBP14.85□□□□□ -0.03
HMGCS2-201ENST00000369406 RPL34P49207 117 aaKnown RBP14.85□□□□□ -0.03
HMGCS2-201ENST00000369406 BST2Q10589 180 aaKnown RBP14.85□□□□□ -0.03
HMGCS2-201ENST00000369406 CC2D1AQ6P1N0 951 aaPredicted RBP14.85□□□□□ -0.03
HMGCS2-201ENST00000369406 CLEC20AQ6ZU45 233 aa14.85□□□□□ -0.03
HMGCS2-201ENST00000369406 ZMIZ2Q8NF64 920 aa14.85□□□□□ -0.03
HMGCS2-201ENST00000369406 PCED1BQ96HM7 432 aa14.85□□□□□ -0.03
HMGCS2-201ENST00000369406 TOX2Q96NM4 488 aa14.85□□□□□ -0.03
HMGCS2-201ENST00000369406 DCDC2CA8MYV0 355 aa14.85□□□□□ -0.03
HMGCS2-201ENST00000369406 MAN1A1P33908 653 aa14.85□□□□□ -0.03
HMGCS2-201ENST00000369406 SLC1A1P43005 524 aa14.85□□□□□ -0.03
HMGCS2-201ENST00000369406 BCAT1P54687 386 aa14.85□□□□□ -0.03
HMGCS2-201ENST00000369406 ADCY2Q08462 1091 aa14.85□□□□□ -0.03
HMGCS2-201ENST00000369406 LONRF2Q1L5Z9 754 aa14.85□□□□□ -0.03
HMGCS2-201ENST00000369406 C15orf59Q2T9L4 293 aaPredicted RBP14.85□□□□□ -0.03
HMGCS2-201ENST00000369406 GPRIN1Q7Z2K8 1008 aa14.85□□□□□ -0.03
HMGCS2-201ENST00000369406 TMEM173Q86WV6 379 aaPredicted RBP14.85□□□□□ -0.03
HMGCS2-201ENST00000369406 SUSD3Q96L08 255 aa14.85□□□□□ -0.03
HMGCS2-201ENST00000369406 B3GALT6Q96L58 329 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms