RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 HIST2H2AA3Q6FI13 130 aa18.84■□□□□ 0.61
SNX27-202ENST00000368841 ADSSL1Q8N142 457 aa18.84■□□□□ 0.61
SNX27-202ENST00000368841 PCYOX1LQ8NBM8 494 aa18.84■□□□□ 0.61
SNX27-202ENST00000368841 FBXO32Q969P5 355 aa18.84■□□□□ 0.61
SNX27-202ENST00000368841 NR5A2O00482 541 aa18.84■□□□□ 0.61
SNX27-202ENST00000368841 RAD9BQ6WBX8 426 aa18.84■□□□□ 0.61
SNX27-202ENST00000368841 SYDE1Q6ZW31 735 aaPredicted RBP18.84■□□□□ 0.61
SNX27-202ENST00000368841 CATSPER1Q8NEC5 780 aa18.84■□□□□ 0.61
SNX27-202ENST00000368841 IGFLR1Q9H665 355 aa18.84■□□□□ 0.61
SNX27-202ENST00000368841 H2AFYO75367 372 aaKnown RBP18.83■□□□□ 0.61
SNX27-202ENST00000368841 KATNA1O75449 491 aa18.83■□□□□ 0.61
SNX27-202ENST00000368841 TRIM25Q14258 630 aaKnown RBP18.83■□□□□ 0.61
SNX27-202ENST00000368841 TUBGCP3Q96CW5 907 aa18.83■□□□□ 0.61
SNX27-202ENST00000368841 MTFMTQ96DP5 389 aaKnown RBP18.83■□□□□ 0.61
SNX27-202ENST00000368841 MTERF3Q96E29 417 aa18.83■□□□□ 0.61
SNX27-202ENST00000368841 NUDT12Q9BQG2 462 aa18.83■□□□□ 0.61
SNX27-202ENST00000368841 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.83■□□□□ 0.61
SNX27-202ENST00000368841 SMG5Q9UPR3 1016 aaKnown RBP18.83■□□□□ 0.61
SNX27-202ENST00000368841 STARD3Q14849 445 aa18.83■□□□□ 0.61
SNX27-202ENST00000368841 NAB2Q15742 525 aa18.83■□□□□ 0.61
SNX27-202ENST00000368841 ICE2Q659A1 982 aa18.83■□□□□ 0.61
SNX27-202ENST00000368841 LRRC8BQ6P9F7 803 aa18.83■□□□□ 0.61
SNX27-202ENST00000368841 TDRKHQ9Y2W6 561 aaKnown RBP18.83■□□□□ 0.61
SNX27-202ENST00000368841 C16orf86Q6ZW13 317 aa18.83■□□□□ 0.6
SNX27-202ENST00000368841 SLITRK1Q96PX8 696 aa18.83■□□□□ 0.6
SNX27-202ENST00000368841 TRIM49D1C9J1S8 452 aa18.83■□□□□ 0.6
SNX27-202ENST00000368841 TRIM66O15016 1216 aa18.83■□□□□ 0.6
SNX27-202ENST00000368841 DEAF1O75398 565 aaPredicted RBP18.83■□□□□ 0.6
SNX27-202ENST00000368841 SLC29A2Q14542 456 aa18.83■□□□□ 0.6
SNX27-202ENST00000368841 DEFB129Q9H1M3 183 aa18.83■□□□□ 0.6
SNX27-202ENST00000368841 SPON1Q9HCB6 807 aa18.83■□□□□ 0.6
SNX27-202ENST00000368841 PADI4Q9UM07 663 aa18.83■□□□□ 0.6
SNX27-202ENST00000368841 PLEKHG2Q9H7P9 1386 aa18.83■□□□□ 0.6
SNX27-202ENST00000368841 QRICH2Q9H0J4 1663 aa18.83■□□□□ 0.6
SNX27-202ENST00000368841 STX7O15400 261 aaKnown RBP18.83■□□□□ 0.6
SNX27-202ENST00000368841 ZNF682O95780 498 aa18.83■□□□□ 0.6
SNX27-202ENST00000368841 DYNC1I2Q13409 638 aaKnown RBP18.83■□□□□ 0.6
SNX27-202ENST00000368841 UVRAGQ9P2Y5 699 aa18.83■□□□□ 0.6
SNX27-202ENST00000368841 ARHGEF40Q8TER5 1519 aa18.83■□□□□ 0.6
SNX27-202ENST00000368841 F5H5T6 163 aa18.82■□□□□ 0.6
SNX27-202ENST00000368841 USP1O94782 785 aa18.82■□□□□ 0.6
SNX27-202ENST00000368841 SNRPAP09012 282 aaKnown RBP18.82■□□□□ 0.6
SNX27-202ENST00000368841 PDIA5Q14554 519 aa18.82■□□□□ 0.6
SNX27-202ENST00000368841 YME1L1Q96TA2 773 aa18.82■□□□□ 0.6
SNX27-202ENST00000368841 TBX20Q9UMR3 447 aa18.82■□□□□ 0.6
SNX27-202ENST00000368841 MYL4P12829 197 aa18.82■□□□□ 0.6
SNX27-202ENST00000368841 TAF6P49848 677 aa18.82■□□□□ 0.6
SNX27-202ENST00000368841 ALX1Q15699 326 aa18.82■□□□□ 0.6
SNX27-202ENST00000368841 P3H2Q8IVL5 708 aa18.82■□□□□ 0.6
SNX27-202ENST00000368841 DDI1Q8WTU0 396 aa18.82■□□□□ 0.6
SNX27-202ENST00000368841 FICDQ9BVA6 458 aa18.82■□□□□ 0.6
SNX27-202ENST00000368841 COPS7BQ9H9Q2 264 aaPredicted RBP18.82■□□□□ 0.6
SNX27-202ENST00000368841 SCN3BQ9NY72 215 aa18.82■□□□□ 0.6
SNX27-202ENST00000368841 FZD1Q9UP38 647 aa18.82■□□□□ 0.6
SNX27-202ENST00000368841 A0A1B0GTH6 734 aa18.82■□□□□ 0.6
SNX27-202ENST00000368841 EVPLLA8MZ36 301 aa18.82■□□□□ 0.6
SNX27-202ENST00000368841 CYB561D2O14569 222 aa18.82■□□□□ 0.6
SNX27-202ENST00000368841 PYGMP11217 842 aa18.82■□□□□ 0.6
SNX27-202ENST00000368841 RASA1P20936 1047 aa18.82■□□□□ 0.6
SNX27-202ENST00000368841 COILP38432 576 aaPredicted RBP18.82■□□□□ 0.6
SNX27-202ENST00000368841 CCDC103Q8IW40 242 aa18.82■□□□□ 0.6
SNX27-202ENST00000368841 XPO6Q96QU8 1125 aaKnown RBP18.82■□□□□ 0.6
SNX27-202ENST00000368841 B3GAT3O94766 335 aa18.82■□□□□ 0.6
SNX27-202ENST00000368841 HSMCR30P0CW71 290 aa18.82■□□□□ 0.6
SNX27-202ENST00000368841 CDH2P19022 906 aaPredicted RBP18.82■□□□□ 0.6
SNX27-202ENST00000368841 SERPINB9P50453 376 aa18.82■□□□□ 0.6
SNX27-202ENST00000368841 PHKG1Q16816 387 aa18.82■□□□□ 0.6
SNX27-202ENST00000368841 E4F1Q66K89 784 aaPredicted RBP18.82■□□□□ 0.6
SNX27-202ENST00000368841 PTAR1Q7Z6K3 402 aaPredicted RBP18.82■□□□□ 0.6
SNX27-202ENST00000368841 ATP6V0D2Q8N8Y2 350 aa18.82■□□□□ 0.6
SNX27-202ENST00000368841 ALG6Q9Y672 507 aa18.82■□□□□ 0.6
SNX27-202ENST00000368841 GEMIN4P57678 1058 aaKnown RBP18.82■□□□□ 0.6
SNX27-202ENST00000368841 CCZ1BP86790 482 aa18.82■□□□□ 0.6
SNX27-202ENST00000368841 CCZ1P86791 482 aaPredicted RBP18.82■□□□□ 0.6
SNX27-202ENST00000368841 ANKS6Q68DC2 871 aa18.82■□□□□ 0.6
SNX27-202ENST00000368841 VCPKMTQ9H867 229 aa18.82■□□□□ 0.6
SNX27-202ENST00000368841 GID8Q9NWU2 228 aa18.82■□□□□ 0.6
SNX27-202ENST00000368841 PPIEQ9UNP9 301 aaKnown RBP18.82■□□□□ 0.6
SNX27-202ENST00000368841 TAF6LQ9Y6J9 622 aa18.82■□□□□ 0.6
SNX27-202ENST00000368841 CSNK2BP67870 215 aa18.82■□□□□ 0.6
SNX27-202ENST00000368841 SCFD2Q8WU76 684 aa18.82■□□□□ 0.6
SNX27-202ENST00000368841 KRT84Q9NSB2 600 aa18.82■□□□□ 0.6
SNX27-202ENST00000368841 PNPLA7Q6ZV29 1317 aa18.82■□□□□ 0.6
SNX27-202ENST00000368841 MAP3K13O43283 966 aa18.81■□□□□ 0.6
SNX27-202ENST00000368841 PCDH8O95206 1070 aa18.81■□□□□ 0.6
SNX27-202ENST00000368841 ACADSBP45954 432 aa18.81■□□□□ 0.6
SNX27-202ENST00000368841 ORC2Q13416 577 aaPredicted RBP18.81■□□□□ 0.6
SNX27-202ENST00000368841 PTK6Q13882 451 aa18.81■□□□□ 0.6
SNX27-202ENST00000368841 C11orf63Q6NUN7 778 aa18.81■□□□□ 0.6
SNX27-202ENST00000368841 TRPM8Q7Z2W7 1104 aa18.81■□□□□ 0.6
SNX27-202ENST00000368841 CIPCQ9C0C6 399 aa18.81■□□□□ 0.6
SNX27-202ENST00000368841 M0R3G1 203 aa18.81■□□□□ 0.6
SNX27-202ENST00000368841 PPP1R37O75864 691 aa18.81■□□□□ 0.6
SNX27-202ENST00000368841 POMCP01189 267 aa18.81■□□□□ 0.6
SNX27-202ENST00000368841 CAPN1P07384 714 aa18.81■□□□□ 0.6
SNX27-202ENST00000368841 RBP3P10745 1247 aa18.81■□□□□ 0.6
SNX27-202ENST00000368841 RUNX1T1Q06455 604 aa18.81■□□□□ 0.6
SNX27-202ENST00000368841 PPIL6Q8IXY8 311 aa18.81■□□□□ 0.6
SNX27-202ENST00000368841 PRPF18Q99633 342 aaKnown RBP18.81■□□□□ 0.6
SNX27-202ENST00000368841 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 104.3 ms