RNA–Protein interactions for RNA: ENST00000368694.7

CHTOP-204, Transcript of chromatin target of PRMT1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHTOP, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-204ENST00000368694 HNRNPABQ99729 332 aaKnown RBP20.5■□□□□ 0.87
CHTOP-204ENST00000368694 METTL5Q9NRN9 209 aaKnown RBP20.5■□□□□ 0.87
CHTOP-204ENST00000368694 SMARCAL1Q9NZC9 954 aa20.5■□□□□ 0.87
CHTOP-204ENST00000368694 HCSTQ9UBK5 93 aa20.5■□□□□ 0.87
CHTOP-204ENST00000368694 IP6K2Q9UHH9 426 aa20.5■□□□□ 0.87
CHTOP-204ENST00000368694 TMEM191CA6NGB0 347 aa20.5■□□□□ 0.87
CHTOP-204ENST00000368694 SPDYE4A6NLX3 237 aa20.5■□□□□ 0.87
CHTOP-204ENST00000368694 PDE2AO00408 941 aaPredicted RBP20.5■□□□□ 0.87
CHTOP-204ENST00000368694 CES2O00748 559 aa20.5■□□□□ 0.87
CHTOP-204ENST00000368694 DDX3YO15523 660 aaKnown RBP20.5■□□□□ 0.87
CHTOP-204ENST00000368694 TRAPPC3O43617 180 aa20.5■□□□□ 0.87
CHTOP-204ENST00000368694 PROSCO94903 275 aa20.5■□□□□ 0.87
CHTOP-204ENST00000368694 NAA30Q147X3 362 aaPredicted RBP20.5■□□□□ 0.87
CHTOP-204ENST00000368694 PPP1R15BQ5SWA1 713 aa20.5■□□□□ 0.87
CHTOP-204ENST00000368694 TEX35Q5T0J7 233 aa20.5■□□□□ 0.87
CHTOP-204ENST00000368694 FAM102AQ5T9C2 384 aaPredicted RBP20.5■□□□□ 0.87
CHTOP-204ENST00000368694 OR6B2Q6IFH4 312 aa20.5■□□□□ 0.87
CHTOP-204ENST00000368694 UBXN4Q92575 508 aa20.5■□□□□ 0.87
CHTOP-204ENST00000368694 GOLGA1Q92805 767 aa20.5■□□□□ 0.87
CHTOP-204ENST00000368694 PCDHB8Q9UN66 801 aa20.5■□□□□ 0.87
CHTOP-204ENST00000368694 LTBP2Q14767 1821 aa20.5■□□□□ 0.87
CHTOP-204ENST00000368694 MYBPHLA2RUH7 354 aa20.49■□□□□ 0.87
CHTOP-204ENST00000368694 SIGLEC16A6NMB1 481 aa20.49■□□□□ 0.87
CHTOP-204ENST00000368694 NRP1O14786 923 aa20.49■□□□□ 0.87
CHTOP-204ENST00000368694 KIAA0355O15063 1070 aa20.49■□□□□ 0.87
CHTOP-204ENST00000368694 CEP104O60308 925 aa20.49■□□□□ 0.87
CHTOP-204ENST00000368694 SLC1A1P43005 524 aa20.49■□□□□ 0.87
CHTOP-204ENST00000368694 SNX16P57768 344 aa20.49■□□□□ 0.87
CHTOP-204ENST00000368694 RNASE9P60153 205 aaKnown RBP20.49■□□□□ 0.87
CHTOP-204ENST00000368694 YWHAHQ04917 246 aaPredicted RBP20.49■□□□□ 0.87
CHTOP-204ENST00000368694 THEM5Q8N1Q8 247 aa20.49■□□□□ 0.87
CHTOP-204ENST00000368694 LRRC43Q8N309 656 aa20.49■□□□□ 0.87
CHTOP-204ENST00000368694 KRT35Q92764 455 aa20.49■□□□□ 0.87
CHTOP-204ENST00000368694 VWCEQ96DN2 955 aa20.49■□□□□ 0.87
CHTOP-204ENST00000368694 PCDH10Q9P2E7 1040 aa20.49■□□□□ 0.87
CHTOP-204ENST00000368694 RNF14Q9UBS8 474 aa20.49■□□□□ 0.87
CHTOP-204ENST00000368694 USTQ9Y2C2 406 aa20.49■□□□□ 0.87
CHTOP-204ENST00000368694 ALDH2P05091 517 aa20.49■□□□□ 0.87
CHTOP-204ENST00000368694 EN2P19622 333 aaPredicted RBP20.49■□□□□ 0.87
CHTOP-204ENST00000368694 TYMPP19971 482 aa20.49■□□□□ 0.87
CHTOP-204ENST00000368694 MARCKSL1P49006 195 aa20.49■□□□□ 0.87
CHTOP-204ENST00000368694 BCAR1P56945 870 aa20.49■□□□□ 0.87
CHTOP-204ENST00000368694 DAB2IPQ5VWQ8 1189 aa20.49■□□□□ 0.87
CHTOP-204ENST00000368694 FAM183BPQ6ZVS7 135 aa20.49■□□□□ 0.87
CHTOP-204ENST00000368694 TMEM199Q8N511 208 aa20.49■□□□□ 0.87
CHTOP-204ENST00000368694 PCED1BQ96HM7 432 aa20.49■□□□□ 0.87
CHTOP-204ENST00000368694 RTP3Q9BQQ7 232 aa20.49■□□□□ 0.87
CHTOP-204ENST00000368694 ACBD6Q9BR61 282 aa20.49■□□□□ 0.87
CHTOP-204ENST00000368694 ADAM28Q9UKQ2 775 aa20.49■□□□□ 0.87
CHTOP-204ENST00000368694 CCDC66A2RUB6 948 aa20.48■□□□□ 0.87
CHTOP-204ENST00000368694 NPR3P17342 541 aa20.48■□□□□ 0.87
CHTOP-204ENST00000368694 SSR1P43307 286 aaKnown RBP20.48■□□□□ 0.87
CHTOP-204ENST00000368694 ERCC6LQ2NKX8 1250 aa20.48■□□□□ 0.87
CHTOP-204ENST00000368694 MYCBPAPQ8TBZ2 947 aa20.48■□□□□ 0.87
CHTOP-204ENST00000368694 STK32AQ8WU08 396 aa20.48■□□□□ 0.87
CHTOP-204ENST00000368694 ALG3Q92685 438 aa20.48■□□□□ 0.87
CHTOP-204ENST00000368694 CD101Q93033 1021 aa20.48■□□□□ 0.87
CHTOP-204ENST00000368694 MCRS1Q96EZ8 462 aa20.48■□□□□ 0.87
CHTOP-204ENST00000368694 SLC4A5Q9BY07 1137 aa20.48■□□□□ 0.87
CHTOP-204ENST00000368694 DUSP16Q9BY84 665 aa20.48■□□□□ 0.87
CHTOP-204ENST00000368694 B3GNT5Q9BYG0 378 aa20.48■□□□□ 0.87
CHTOP-204ENST00000368694 KRT82Q9NSB4 513 aa20.48■□□□□ 0.87
CHTOP-204ENST00000368694 FAN1Q9Y2M0 1017 aa20.48■□□□□ 0.87
CHTOP-204ENST00000368694 ABHD14A-ACY1A0A1B0GW23 586 aa20.47■□□□□ 0.87
CHTOP-204ENST00000368694 FAM200BP0CF97 657 aa20.47■□□□□ 0.87
CHTOP-204ENST00000368694 CTNNA1P35221 906 aaKnown RBP20.47■□□□□ 0.87
CHTOP-204ENST00000368694 RFC1P35251 1148 aaPredicted RBP20.47■□□□□ 0.87
CHTOP-204ENST00000368694 PLCB3Q01970 1234 aa20.47■□□□□ 0.87
CHTOP-204ENST00000368694 INTS6LQ5JSJ4 861 aaKnown RBP20.47■□□□□ 0.87
CHTOP-204ENST00000368694 MFSD5Q6N075 450 aa20.47■□□□□ 0.87
CHTOP-204ENST00000368694 PAQR9Q6ZVX9 377 aa20.47■□□□□ 0.87
CHTOP-204ENST00000368694 TMEM110Q86TL2 294 aa20.47■□□□□ 0.87
CHTOP-204ENST00000368694 JOSD2Q8TAC2 188 aa20.47■□□□□ 0.87
CHTOP-204ENST00000368694 RPGRIP1Q96KN7 1286 aa20.47■□□□□ 0.87
CHTOP-204ENST00000368694 COLEC11Q9BWP8 271 aa20.47■□□□□ 0.87
CHTOP-204ENST00000368694 OGFRQ9NZT2 677 aa20.47■□□□□ 0.87
CHTOP-204ENST00000368694 LCMT1Q9UIC8 334 aa20.47■□□□□ 0.87
CHTOP-204ENST00000368694 XPO1O14980 1071 aaKnown RBP20.47■□□□□ 0.87
CHTOP-204ENST00000368694 LCP1P13796 627 aa20.47■□□□□ 0.87
CHTOP-204ENST00000368694 PLA2G4AP47712 749 aa20.47■□□□□ 0.87
CHTOP-204ENST00000368694 SLC11A1P49279 550 aa20.47■□□□□ 0.87
CHTOP-204ENST00000368694 TSPY1Q01534 308 aa20.47■□□□□ 0.87
CHTOP-204ENST00000368694 DCAF12L1Q5VU92 463 aa20.47■□□□□ 0.87
CHTOP-204ENST00000368694 FAM35AQ86V20 835 aa20.47■□□□□ 0.87
CHTOP-204ENST00000368694 SCUBE3Q8IX30 993 aa20.47■□□□□ 0.87
CHTOP-204ENST00000368694 EMC1Q8N766 993 aa20.47■□□□□ 0.87
CHTOP-204ENST00000368694 CARD9Q9H257 536 aa20.47■□□□□ 0.87
CHTOP-204ENST00000368694 PCDHA3Q9Y5H8 950 aa20.47■□□□□ 0.87
CHTOP-204ENST00000368694 CTNNA2P26232 953 aa20.46■□□□□ 0.87
CHTOP-204ENST00000368694 MAN1A1P33908 653 aa20.46■□□□□ 0.87
CHTOP-204ENST00000368694 PBX3P40426 434 aa20.46■□□□□ 0.87
CHTOP-204ENST00000368694 OGDHQ02218 1023 aa20.46■□□□□ 0.87
CHTOP-204ENST00000368694 C2orf54Q08AI8 447 aa20.46■□□□□ 0.87
CHTOP-204ENST00000368694 ZNF252P-AS1Q0IIN9 211 aa20.46■□□□□ 0.87
CHTOP-204ENST00000368694 ZNF211Q13398 564 aaPredicted RBP20.46■□□□□ 0.87
CHTOP-204ENST00000368694 ELF2Q15723 593 aa20.46■□□□□ 0.87
CHTOP-204ENST00000368694 OR10T2Q8NGX3 314 aa20.46■□□□□ 0.87
CHTOP-204ENST00000368694 PIWIL1Q96J94 861 aaKnown RBP20.46■□□□□ 0.87
CHTOP-204ENST00000368694 VWA8A3KMH1 1905 aa20.46■□□□□ 0.87
CHTOP-204ENST00000368694 NT5C1B-RDH14C9J2C7 533 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms