RNA–Protein interactions for RNA: ENST00000368662.9

TUBE1-202, Transcript of tubulin epsilon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBE1, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-202ENST00000368662 PAQR9Q6ZVX9 377 aa13.01□□□□□ -0.33
TUBE1-202ENST00000368662 DNAAF5Q86Y56 855 aa13.01□□□□□ -0.33
TUBE1-202ENST00000368662 SPATA2LQ8IUW3 424 aaPredicted RBP13.01□□□□□ -0.33
TUBE1-202ENST00000368662 SLC35G2Q8TBE7 412 aa13.01□□□□□ -0.33
TUBE1-202ENST00000368662 C2orf15Q8WU43 125 aaKnown RBP13.01□□□□□ -0.33
TUBE1-202ENST00000368662 MYLPFQ96A32 169 aa13.01□□□□□ -0.33
TUBE1-202ENST00000368662 C16orf45Q96MC5 204 aaPredicted RBP13.01□□□□□ -0.33
TUBE1-202ENST00000368662 LPIN3Q9BQK8 851 aa13.01□□□□□ -0.33
TUBE1-202ENST00000368662 PLVAPQ9BX97 442 aa13.01□□□□□ -0.33
TUBE1-202ENST00000368662 UBXN6Q9BZV1 441 aa13.01□□□□□ -0.33
TUBE1-202ENST00000368662 PARVAQ9NVD7 372 aa13.01□□□□□ -0.33
TUBE1-202ENST00000368662 CTTNBP2NLQ9P2B4 639 aa13.01□□□□□ -0.33
TUBE1-202ENST00000368662 MTRRQ9UBK8 725 aa13.01□□□□□ -0.33
TUBE1-202ENST00000368662 TRIM10Q9UDY6 481 aa13.01□□□□□ -0.33
TUBE1-202ENST00000368662 CYTH4Q9UIA0 394 aa13.01□□□□□ -0.33
TUBE1-202ENST00000368662 SSX2IPQ9Y2D8 614 aa13.01□□□□□ -0.33
TUBE1-202ENST00000368662 VWA8A3KMH1 1905 aa13□□□□□ -0.33
TUBE1-202ENST00000368662 TBC1D4O60343 1298 aa13□□□□□ -0.33
TUBE1-202ENST00000368662 FGF18O76093 207 aa13□□□□□ -0.33
TUBE1-202ENST00000368662 URODP06132 367 aa13□□□□□ -0.33
TUBE1-202ENST00000368662 NOP2P46087 812 aaKnown RBP13□□□□□ -0.33
TUBE1-202ENST00000368662 HADHBP55084 474 aaKnown RBP13□□□□□ -0.33
TUBE1-202ENST00000368662 CREMQ03060 361 aa13□□□□□ -0.33
TUBE1-202ENST00000368662 SHHQ15465 462 aa13□□□□□ -0.33
TUBE1-202ENST00000368662 PSMD5Q16401 504 aa13□□□□□ -0.33
TUBE1-202ENST00000368662 CFAP221Q4G0U5 840 aa13□□□□□ -0.33
TUBE1-202ENST00000368662 PTPN20Q4JDL3 420 aa13□□□□□ -0.33
TUBE1-202ENST00000368662 SLC39A12Q504Y0 691 aa13□□□□□ -0.33
TUBE1-202ENST00000368662 TAS1R1Q7RTX1 841 aa13□□□□□ -0.33
TUBE1-202ENST00000368662 ZDHHC17Q8IUH5 632 aa13□□□□□ -0.33
TUBE1-202ENST00000368662 RIN2Q8WYP3 895 aaPredicted RBP13□□□□□ -0.33
TUBE1-202ENST00000368662 CPXM1Q96SM3 734 aa13□□□□□ -0.33
TUBE1-202ENST00000368662 VN1R3Q9BXE9 311 aa13□□□□□ -0.33
TUBE1-202ENST00000368662 SLC4A5Q9BY07 1137 aa13□□□□□ -0.33
TUBE1-202ENST00000368662 UBE2OQ9C0C9 1292 aaKnown RBP13□□□□□ -0.33
TUBE1-202ENST00000368662 ST7Q9NRC1 585 aa13□□□□□ -0.33
TUBE1-202ENST00000368662 KRT82Q9NSB4 513 aa13□□□□□ -0.33
TUBE1-202ENST00000368662 LCMT1Q9UIC8 334 aa13□□□□□ -0.33
TUBE1-202ENST00000368662 AP1G2O75843 785 aa13□□□□□ -0.33
TUBE1-202ENST00000368662 MTA2O94776 668 aa13□□□□□ -0.33
TUBE1-202ENST00000368662 ABL1P00519 1130 aa13□□□□□ -0.33
TUBE1-202ENST00000368662 CPB1P15086 417 aa13□□□□□ -0.33
TUBE1-202ENST00000368662 RRM1P23921 792 aa13□□□□□ -0.33
TUBE1-202ENST00000368662 BMPR1AP36894 532 aa13□□□□□ -0.33
TUBE1-202ENST00000368662 RPL34P49207 117 aaKnown RBP13□□□□□ -0.33
TUBE1-202ENST00000368662 ETF1P62495 437 aaKnown RBP13□□□□□ -0.33
TUBE1-202ENST00000368662 TAP1Q03518 808 aa13□□□□□ -0.33
TUBE1-202ENST00000368662 GPR17Q13304 367 aa13□□□□□ -0.33
TUBE1-202ENST00000368662 ZNF268Q14587 947 aaPredicted RBP13□□□□□ -0.33
TUBE1-202ENST00000368662 SLC8B1Q6J4K2 584 aa13□□□□□ -0.33
TUBE1-202ENST00000368662 PMF1Q6P1K2 205 aa13□□□□□ -0.33
TUBE1-202ENST00000368662 CLEC20AQ6ZU45 233 aa13□□□□□ -0.33
TUBE1-202ENST00000368662 TMEM110Q86TL2 294 aa13□□□□□ -0.33
TUBE1-202ENST00000368662 LRRTM3Q86VH5 581 aa13□□□□□ -0.33
TUBE1-202ENST00000368662 C3orf20Q8ND61 904 aa13□□□□□ -0.33
TUBE1-202ENST00000368662 ARHGEF26Q96DR7 871 aa13□□□□□ -0.33
TUBE1-202ENST00000368662 B3GALT6Q96L58 329 aa13□□□□□ -0.33
TUBE1-202ENST00000368662 TMEM209Q96SK2 561 aa13□□□□□ -0.33
TUBE1-202ENST00000368662 GDF15Q99988 308 aa13□□□□□ -0.33
TUBE1-202ENST00000368662 CSNK1G1Q9HCP0 422 aa13□□□□□ -0.33
TUBE1-202ENST00000368662 ABCB6Q9NP58 842 aa13□□□□□ -0.33
TUBE1-202ENST00000368662 PNPLA8Q9NP80 782 aa13□□□□□ -0.33
TUBE1-202ENST00000368662 DMAP1Q9NPF5 467 aaPredicted RBP13□□□□□ -0.33
TUBE1-202ENST00000368662 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13□□□□□ -0.33
TUBE1-202ENST00000368662 LZTS1Q9Y250 596 aa13□□□□□ -0.33
TUBE1-202ENST00000368662 LINC01553A4QN01 128 aa12.99□□□□□ -0.33
TUBE1-202ENST00000368662 CLDN5O00501 218 aa12.99□□□□□ -0.33
TUBE1-202ENST00000368662 GNG11P61952 73 aa12.99□□□□□ -0.33
TUBE1-202ENST00000368662 PLEKHA7Q6IQ23 1121 aa12.99□□□□□ -0.33
TUBE1-202ENST00000368662 VSTM1Q6UX27 236 aa12.99□□□□□ -0.33
TUBE1-202ENST00000368662 VPS52Q8N1B4 723 aa12.99□□□□□ -0.33
TUBE1-202ENST00000368662 FBXO22Q8NEZ5 403 aa12.99□□□□□ -0.33
TUBE1-202ENST00000368662 KCTD13Q8WZ19 329 aa12.99□□□□□ -0.33
TUBE1-202ENST00000368662 SAMD11Q96NU1 681 aa12.99□□□□□ -0.33
TUBE1-202ENST00000368662 NUP85Q9BW27 656 aa12.99□□□□□ -0.33
TUBE1-202ENST00000368662 MRPL17Q9NRX2 175 aaKnown RBP12.99□□□□□ -0.33
TUBE1-202ENST00000368662 PAXBP1Q9Y5B6 917 aa12.99□□□□□ -0.33
TUBE1-202ENST00000368662 PCDHB5Q9Y5E4 795 aa12.99□□□□□ -0.33
TUBE1-202ENST00000368662 LCHNA4D1U4 455 aa12.98□□□□□ -0.33
TUBE1-202ENST00000368662 BUB1O43683 1085 aa12.98□□□□□ -0.33
TUBE1-202ENST00000368662 RB1P06400 928 aa12.98□□□□□ -0.33
TUBE1-202ENST00000368662 TNNT1P13805 278 aa12.98□□□□□ -0.33
TUBE1-202ENST00000368662 CTNNB1P35222 781 aa12.98□□□□□ -0.33
TUBE1-202ENST00000368662 MAP3K7CLP57077 242 aa12.98□□□□□ -0.33
TUBE1-202ENST00000368662 CCDC142Q17RM4 750 aa12.98□□□□□ -0.33
TUBE1-202ENST00000368662 ZNF569Q5MCW4 686 aa12.98□□□□□ -0.33
TUBE1-202ENST00000368662 DNAJC24Q6P3W2 148 aa12.98□□□□□ -0.33
TUBE1-202ENST00000368662 SYCE1Q8N0S2 351 aa12.98□□□□□ -0.33
TUBE1-202ENST00000368662 KLHL23Q8NBE8 558 aa12.98□□□□□ -0.33
TUBE1-202ENST00000368662 ZNF564Q8TBZ8 553 aaPredicted RBP12.98□□□□□ -0.33
TUBE1-202ENST00000368662 SPPL2BQ8TCT7 592 aa12.98□□□□□ -0.33
TUBE1-202ENST00000368662 UBE2Q2Q8WVN8 375 aa12.98□□□□□ -0.33
TUBE1-202ENST00000368662 TMLHEQ9NVH6 421 aa12.98□□□□□ -0.33
TUBE1-202ENST00000368662 SALL4Q9UJQ4 1053 aa12.98□□□□□ -0.33
TUBE1-202ENST00000368662 PCDHGC5Q9Y5F6 944 aa12.98□□□□□ -0.33
TUBE1-202ENST00000368662 PCDHA11Q9Y5I1 949 aa12.98□□□□□ -0.33
TUBE1-202ENST00000368662 CDY1Q9Y6F8 540 aa12.98□□□□□ -0.33
TUBE1-202ENST00000368662 LAMA2P24043 3122 aaKnown RBP12.98□□□□□ -0.33
TUBE1-202ENST00000368662 FAM170AA1A519 330 aa12.98□□□□□ -0.33
TUBE1-202ENST00000368662 E5RJQ4 531 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms