RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 INTS7Q9NVH2 962 aaKnown RBP9.4□□□□□ -0.9
TPM3-213ENST00000368545 GCNT4Q9P109 453 aa9.4□□□□□ -0.9
TPM3-213ENST00000368545 MYO6Q9UM54 1294 aa9.4□□□□□ -0.9
TPM3-213ENST00000368545 PLAGL2Q9UPG8 496 aa9.4□□□□□ -0.9
TPM3-213ENST00000368545 STYXL1Q9Y6J8 313 aa9.4□□□□□ -0.9
TPM3-213ENST00000368545 MUC6Q6W4X9 2439 aa9.4□□□□□ -0.9
TPM3-213ENST00000368545 TISP43B9A030 160 aa9.4□□□□□ -0.91
TPM3-213ENST00000368545 ANKRD63C9JTQ0 380 aa9.4□□□□□ -0.91
TPM3-213ENST00000368545 PMM2O15305 246 aa9.4□□□□□ -0.91
TPM3-213ENST00000368545 CAND2O75155 1236 aa9.4□□□□□ -0.91
TPM3-213ENST00000368545 LDHAP00338 332 aaKnown RBP9.4□□□□□ -0.91
TPM3-213ENST00000368545 INSRRP14616 1297 aa9.4□□□□□ -0.91
TPM3-213ENST00000368545 FGFR3P22607 806 aa9.4□□□□□ -0.91
TPM3-213ENST00000368545 CYLC1P35663 651 aaPredicted RBP9.4□□□□□ -0.91
TPM3-213ENST00000368545 MYL7Q01449 175 aa9.4□□□□□ -0.91
TPM3-213ENST00000368545 GSTM4Q03013 218 aa9.4□□□□□ -0.91
TPM3-213ENST00000368545 LAMTOR4Q0VGL1 99 aa9.4□□□□□ -0.91
TPM3-213ENST00000368545 PTPN14Q15678 1187 aa9.4□□□□□ -0.91
TPM3-213ENST00000368545 TMEM201Q5SNT2 666 aa9.4□□□□□ -0.91
TPM3-213ENST00000368545 EFCAB12Q6NXP0 572 aa9.4□□□□□ -0.91
TPM3-213ENST00000368545 SLC39A4Q6P5W5 647 aa9.4□□□□□ -0.91
TPM3-213ENST00000368545 ZPBP2Q6X784 338 aa9.4□□□□□ -0.91
TPM3-213ENST00000368545 TSHZ1Q6ZSZ6 1077 aa9.4□□□□□ -0.91
TPM3-213ENST00000368545 CCDC170Q8IYT3 715 aa9.4□□□□□ -0.91
TPM3-213ENST00000368545 MYO1HQ8N1T3 1032 aa9.4□□□□□ -0.91
TPM3-213ENST00000368545 KLHDC9Q8NEP7 349 aa9.4□□□□□ -0.91
TPM3-213ENST00000368545 DDX1Q92499 740 aaKnown RBP9.4□□□□□ -0.91
TPM3-213ENST00000368545 PPP1R13BQ96KQ4 1090 aa9.4□□□□□ -0.91
TPM3-213ENST00000368545 GANQ9H2C0 597 aa9.4□□□□□ -0.91
TPM3-213ENST00000368545 SUCLA2Q9P2R7 463 aaPredicted RBP9.4□□□□□ -0.91
TPM3-213ENST00000368545 PPP2R2CQ9Y2T4 447 aa9.4□□□□□ -0.91
TPM3-213ENST00000368545 CACNA1AO00555 2505 aa9.4□□□□□ -0.91
TPM3-213ENST00000368545 RRN3P2A6NIE6 340 aa9.39□□□□□ -0.91
TPM3-213ENST00000368545 EPHB6O15197 1021 aa9.39□□□□□ -0.91
TPM3-213ENST00000368545 EFCAB14O75071 495 aa9.39□□□□□ -0.91
TPM3-213ENST00000368545 NOL4O94818 638 aa9.39□□□□□ -0.91
TPM3-213ENST00000368545 F2P00734 622 aa9.39□□□□□ -0.91
TPM3-213ENST00000368545 CSF2RAP15509 400 aa9.39□□□□□ -0.91
TPM3-213ENST00000368545 CYP2C19P33261 490 aa9.39□□□□□ -0.91
TPM3-213ENST00000368545 PPP2R2AP63151 447 aa9.39□□□□□ -0.91
TPM3-213ENST00000368545 MAPK6Q16659 721 aa9.39□□□□□ -0.91
TPM3-213ENST00000368545 PDXDC1Q6P996 788 aa9.39□□□□□ -0.91
TPM3-213ENST00000368545 RAD9BQ6WBX8 426 aa9.39□□□□□ -0.91
TPM3-213ENST00000368545 LRRC71Q8N4P6 559 aa9.39□□□□□ -0.91
TPM3-213ENST00000368545 RNF149Q8NC42 400 aa9.39□□□□□ -0.91
TPM3-213ENST00000368545 SLC39A13Q96H72 371 aa9.39□□□□□ -0.91
TPM3-213ENST00000368545 C16orf45Q96MC5 204 aaPredicted RBP9.39□□□□□ -0.91
TPM3-213ENST00000368545 CRACR2AQ9BSW2 395 aa9.39□□□□□ -0.91
TPM3-213ENST00000368545 KATNAL1Q9BW62 490 aa9.39□□□□□ -0.91
TPM3-213ENST00000368545 LGR4Q9BXB1 951 aa9.39□□□□□ -0.91
TPM3-213ENST00000368545 MRPL4Q9BYD3 311 aaKnown RBP9.39□□□□□ -0.91
TPM3-213ENST00000368545 CCDC86Q9H6F5 360 aaKnown RBP9.39□□□□□ -0.91
TPM3-213ENST00000368545 CHST12Q9NRB3 414 aa9.39□□□□□ -0.91
TPM3-213ENST00000368545 TRMT1Q9NXH9 659 aaKnown RBP9.39□□□□□ -0.91
TPM3-213ENST00000368545 HTTP42858 3142 aa9.39□□□□□ -0.91
TPM3-213ENST00000368545 TMEM221A6NGB7 291 aa9.38□□□□□ -0.91
TPM3-213ENST00000368545 LRRC53A6NM62 1247 aa9.38□□□□□ -0.91
TPM3-213ENST00000368545 USP27XA6NNY8 438 aa9.38□□□□□ -0.91
TPM3-213ENST00000368545 GRXCR1A8MXD5 290 aa9.38□□□□□ -0.91
TPM3-213ENST00000368545 M0R296 226 aa9.38□□□□□ -0.91
TPM3-213ENST00000368545 DYNC1LI2O43237 492 aaPredicted RBP9.38□□□□□ -0.91
TPM3-213ENST00000368545 ADCY6O43306 1168 aa9.38□□□□□ -0.91
TPM3-213ENST00000368545 EXTL3O43909 919 aa9.38□□□□□ -0.91
TPM3-213ENST00000368545 ZEB2O60315 1214 aa9.38□□□□□ -0.91
TPM3-213ENST00000368545 DNAJC8O75937 253 aaPredicted RBP9.38□□□□□ -0.91
TPM3-213ENST00000368545 IPO7O95373 1038 aaKnown RBP9.38□□□□□ -0.91
TPM3-213ENST00000368545 TRIM49P0CI25 452 aa9.38□□□□□ -0.91
TPM3-213ENST00000368545 TRIM49CP0CI26 452 aa9.38□□□□□ -0.91
TPM3-213ENST00000368545 ARAFP10398 606 aa9.38□□□□□ -0.91
TPM3-213ENST00000368545 KLRC1P26715 233 aa9.38□□□□□ -0.91
TPM3-213ENST00000368545 PON1P27169 355 aa9.38□□□□□ -0.91
TPM3-213ENST00000368545 GTF2H1P32780 548 aa9.38□□□□□ -0.91
TPM3-213ENST00000368545 POLR2FP61218 127 aaKnown RBP9.38□□□□□ -0.91
TPM3-213ENST00000368545 CTBSQ01459 385 aa9.38□□□□□ -0.91
TPM3-213ENST00000368545 PTSQ03393 145 aa9.38□□□□□ -0.91
TPM3-213ENST00000368545 TCF15Q12870 199 aa9.38□□□□□ -0.91
TPM3-213ENST00000368545 PPFIA1Q13136 1202 aa9.38□□□□□ -0.91
TPM3-213ENST00000368545 DRP2Q13474 957 aa9.38□□□□□ -0.91
TPM3-213ENST00000368545 KLHDC7AQ5VTJ3 777 aa9.38□□□□□ -0.91
TPM3-213ENST00000368545 TRIM65Q6PJ69 517 aa9.38□□□□□ -0.91
TPM3-213ENST00000368545 WDR59Q6PJI9 974 aa9.38□□□□□ -0.91
TPM3-213ENST00000368545 TOGARAM2Q6ZUX3 1019 aa9.38□□□□□ -0.91
TPM3-213ENST00000368545 RRAGAQ7L523 313 aa9.38□□□□□ -0.91
TPM3-213ENST00000368545 RHPN2Q8IUC4 686 aa9.38□□□□□ -0.91
TPM3-213ENST00000368545 METTL13Q8N6R0 699 aa9.38□□□□□ -0.91
TPM3-213ENST00000368545 LINC01465Q8N7H1 131 aa9.38□□□□□ -0.91
TPM3-213ENST00000368545 TRAPPC12Q8WVT3 735 aa9.38□□□□□ -0.91
TPM3-213ENST00000368545 SAAL1Q96ER3 474 aa9.38□□□□□ -0.91
TPM3-213ENST00000368545 AARSD1Q9BTE6 412 aaKnown RBP9.38□□□□□ -0.91
TPM3-213ENST00000368545 AP5M1Q9H0R1 490 aa9.38□□□□□ -0.91
TPM3-213ENST00000368545 UPF3AQ9H1J1 476 aaKnown RBP9.38□□□□□ -0.91
TPM3-213ENST00000368545 ARNT2Q9HBZ2 717 aa9.38□□□□□ -0.91
TPM3-213ENST00000368545 CD320Q9NPF0 282 aa9.38□□□□□ -0.91
TPM3-213ENST00000368545 SUSD2Q9UGT4 822 aa9.38□□□□□ -0.91
TPM3-213ENST00000368545 SLC35F4A4IF30 521 aa9.38□□□□□ -0.91
TPM3-213ENST00000368545 PRR23AA6NEV1 266 aa9.38□□□□□ -0.91
TPM3-213ENST00000368545 ZNF233A6NK53 670 aa9.38□□□□□ -0.91
TPM3-213ENST00000368545 MAN1A2O60476 641 aa9.38□□□□□ -0.91
TPM3-213ENST00000368545 NDUFA10O95299 355 aa9.38□□□□□ -0.91
TPM3-213ENST00000368545 PRKCBP05771 671 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms