RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 FAM133BQ5BKY9 247 aaKnown RBP11.23□□□□□ -0.61
TPM3-212ENST00000368533 LRIG3Q6UXM1 1119 aa11.23□□□□□ -0.61
TPM3-212ENST00000368533 KCNV2Q8TDN2 545 aa11.23□□□□□ -0.61
TPM3-212ENST00000368533 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.23□□□□□ -0.611e-8■■■■■ 76.2
TPM3-212ENST00000368533 HEXIM2Q96MH2 286 aaKnown RBP11.23□□□□□ -0.61
TPM3-212ENST00000368533 FAM118BQ9BPY3 351 aa11.23□□□□□ -0.61
TPM3-212ENST00000368533 SELENOSQ9BQE4 189 aa11.23□□□□□ -0.61
TPM3-212ENST00000368533 CARD9Q9H257 536 aa11.23□□□□□ -0.61
TPM3-212ENST00000368533 ADAM22Q9P0K1 906 aa11.23□□□□□ -0.61
TPM3-212ENST00000368533 TIMM13Q9Y5L4 95 aaPredicted RBP11.23□□□□□ -0.61
TPM3-212ENST00000368533 PTCH2Q9Y6C5 1203 aa11.23□□□□□ -0.61
TPM3-212ENST00000368533 HGSO14964 777 aaPredicted RBP11.22□□□□□ -0.61
TPM3-212ENST00000368533 MAP3K13O43283 966 aa11.22□□□□□ -0.61
TPM3-212ENST00000368533 MLH1P40692 756 aa11.22□□□□□ -0.61
TPM3-212ENST00000368533 ACAD10Q6JQN1 1059 aa11.22□□□□□ -0.61
TPM3-212ENST00000368533 DENND1BQ6P3S1 775 aa11.22□□□□□ -0.61
TPM3-212ENST00000368533 MDM1Q8TC05 714 aa11.22□□□□□ -0.61
TPM3-212ENST00000368533 AGAP11Q8TF27 550 aa11.22□□□□□ -0.61
TPM3-212ENST00000368533 MRPL45Q9BRJ2 306 aaKnown RBP11.22□□□□□ -0.61
TPM3-212ENST00000368533 ERP44Q9BS26 406 aa11.22□□□□□ -0.61
TPM3-212ENST00000368533 ELOVL4Q9GZR5 314 aa11.22□□□□□ -0.61
TPM3-212ENST00000368533 A8MUI8 341 aa11.22□□□□□ -0.61
TPM3-212ENST00000368533 I3L4J1 428 aa11.22□□□□□ -0.61
TPM3-212ENST00000368533 MGRN1O60291 552 aa11.22□□□□□ -0.61
TPM3-212ENST00000368533 ZC3H11AO75152 810 aaKnown RBP eCLIP11.22□□□□□ -0.61
TPM3-212ENST00000368533 IL18RAPO95256 599 aa11.22□□□□□ -0.61
TPM3-212ENST00000368533 PECAM1P16284 738 aaPredicted RBP11.22□□□□□ -0.61
TPM3-212ENST00000368533 TBXAS1P24557 533 aaPredicted RBP11.22□□□□□ -0.61
TPM3-212ENST00000368533 SLCO1A2P46721 670 aa11.22□□□□□ -0.61
TPM3-212ENST00000368533 KCNJ1P48048 391 aa11.22□□□□□ -0.61
TPM3-212ENST00000368533 RGS7P49802 495 aa11.22□□□□□ -0.61
TPM3-212ENST00000368533 RAB27AP51159 221 aa11.22□□□□□ -0.61
TPM3-212ENST00000368533 RPL7AP62424 266 aaKnown RBP11.22□□□□□ -0.61
TPM3-212ENST00000368533 MRPS6P82932 125 aaKnown RBP11.22□□□□□ -0.61
TPM3-212ENST00000368533 ACOT1Q86TX2 421 aa11.22□□□□□ -0.61
TPM3-212ENST00000368533 JAMLQ86YT9 394 aa11.22□□□□□ -0.61
TPM3-212ENST00000368533 MAB21L3Q8N8X9 362 aa11.22□□□□□ -0.61
TPM3-212ENST00000368533 GAD1Q99259 594 aa11.22□□□□□ -0.61
TPM3-212ENST00000368533 LRRC4CQ9HCJ2 640 aa11.22□□□□□ -0.61
TPM3-212ENST00000368533 NCANO14594 1321 aa11.22□□□□□ -0.61
TPM3-212ENST00000368533 GRAP2O75791 330 aa11.22□□□□□ -0.61
TPM3-212ENST00000368533 IGHA2P01877 340 aa11.22□□□□□ -0.61
TPM3-212ENST00000368533 GNAT1P11488 350 aa11.22□□□□□ -0.61
TPM3-212ENST00000368533 NDST1P52848 882 aa11.22□□□□□ -0.61
TPM3-212ENST00000368533 ATN1P54259 1190 aaPredicted RBP11.22□□□□□ -0.61
TPM3-212ENST00000368533 SLC8A3P57103 927 aa11.22□□□□□ -0.61
TPM3-212ENST00000368533 ITGA7Q13683 1181 aa11.22□□□□□ -0.61
TPM3-212ENST00000368533 UBXN11Q5T124 520 aa11.22□□□□□ -0.61
TPM3-212ENST00000368533 DENND2CQ68D51 928 aa11.22□□□□□ -0.61
TPM3-212ENST00000368533 CPLX4Q7Z7G2 160 aa11.22□□□□□ -0.61
TPM3-212ENST00000368533 IFNLR1Q8IU57 520 aaPredicted RBP11.22□□□□□ -0.61
TPM3-212ENST00000368533 FBXO25Q8TCJ0 367 aa11.22□□□□□ -0.61
TPM3-212ENST00000368533 PAAF1Q9BRP4 392 aa11.22□□□□□ -0.61
TPM3-212ENST00000368533 DPEP3Q9H4B8 488 aa11.22□□□□□ -0.61
TPM3-212ENST00000368533 ACTR5Q9H9F9 607 aaPredicted RBP11.22□□□□□ -0.61
TPM3-212ENST00000368533 C15orf41Q9Y2V0 281 aa11.22□□□□□ -0.61
TPM3-212ENST00000368533 SMIM28A0A1B0GU29 152 aa11.21□□□□□ -0.61
TPM3-212ENST00000368533 CASTOR2A6NHX0 329 aa11.21□□□□□ -0.61
TPM3-212ENST00000368533 POMCP01189 267 aa11.21□□□□□ -0.61
TPM3-212ENST00000368533 UNGP13051 313 aaPredicted RBP11.21□□□□□ -0.61
TPM3-212ENST00000368533 TCF4P15884 667 aa11.21□□□□□ -0.61
TPM3-212ENST00000368533 ACAT1P24752 427 aaKnown RBP11.21□□□□□ -0.61
TPM3-212ENST00000368533 GRM5P41594 1212 aa11.21□□□□□ -0.61
TPM3-212ENST00000368533 NOMO3P69849 1222 aa11.21□□□□□ -0.61
TPM3-212ENST00000368533 MTFR1Q15390 333 aa11.21□□□□□ -0.61
TPM3-212ENST00000368533 TRIM68Q6AZZ1 485 aa11.21□□□□□ -0.61
TPM3-212ENST00000368533 ENOSF1Q7L5Y1 443 aa11.21□□□□□ -0.61
TPM3-212ENST00000368533 MCOLN2Q8IZK6 566 aa11.21□□□□□ -0.61
TPM3-212ENST00000368533 CACNA2D3Q8IZS8 1091 aa11.21□□□□□ -0.61
TPM3-212ENST00000368533 SMG8Q8ND04 991 aaKnown RBP11.21□□□□□ -0.61
TPM3-212ENST00000368533 OR6B3Q8NGW1 331 aa11.21□□□□□ -0.61
TPM3-212ENST00000368533 PIDD1Q9HB75 910 aa11.21□□□□□ -0.61
TPM3-212ENST00000368533 CYTH4Q9UIA0 394 aa11.21□□□□□ -0.61
TPM3-212ENST00000368533 ZNF236Q9UL36 1845 aa11.21□□□□□ -0.61
TPM3-212ENST00000368533 SPTLC1O15269 473 aa11.21□□□□□ -0.62
TPM3-212ENST00000368533 MGEA5O60502 916 aa11.21□□□□□ -0.62
TPM3-212ENST00000368533 HMGCRP04035 888 aa11.21□□□□□ -0.62
TPM3-212ENST00000368533 CRYBB1P53674 252 aaPredicted RBP11.21□□□□□ -0.62
TPM3-212ENST00000368533 PPP2R2AP63151 447 aa11.21□□□□□ -0.62
TPM3-212ENST00000368533 SURF1Q15526 300 aa11.21□□□□□ -0.62
TPM3-212ENST00000368533 CCDC137Q6PK04 289 aaKnown RBP11.21□□□□□ -0.62
TPM3-212ENST00000368533 CCDC50Q8IVM0 306 aa11.21□□□□□ -0.62
TPM3-212ENST00000368533 EMC1Q8N766 993 aa11.21□□□□□ -0.62
TPM3-212ENST00000368533 HHIPL1Q96JK4 782 aa11.21□□□□□ -0.62
TPM3-212ENST00000368533 SNX27Q96L92 541 aa11.21□□□□□ -0.62
TPM3-212ENST00000368533 H0YGN5 161 aa11.2□□□□□ -0.62
TPM3-212ENST00000368533 M0QYV0 167 aa11.2□□□□□ -0.62
TPM3-212ENST00000368533 SMNDC1O75940 238 aaKnown RBP eCLIP11.2□□□□□ -0.62
TPM3-212ENST00000368533 LINGO3P0C6S8 592 aa11.2□□□□□ -0.62
TPM3-212ENST00000368533 ACLYP53396 1101 aa11.2□□□□□ -0.62
TPM3-212ENST00000368533 RAD23BP54727 409 aa11.2□□□□□ -0.62
TPM3-212ENST00000368533 POU5F1BQ06416 359 aa11.2□□□□□ -0.62
TPM3-212ENST00000368533 XRCC4Q13426 336 aa11.2□□□□□ -0.62
TPM3-212ENST00000368533 CXorf38Q8TB03 319 aa11.2□□□□□ -0.62
TPM3-212ENST00000368533 RAPGEF5Q92565 580 aa11.2□□□□□ -0.62
TPM3-212ENST00000368533 ITFG2Q969R8 447 aa11.2□□□□□ -0.62
TPM3-212ENST00000368533 SYNCQ9H7C4 482 aa11.2□□□□□ -0.62
TPM3-212ENST00000368533 MTUS1Q9ULD2 1270 aa11.2□□□□□ -0.62
TPM3-212ENST00000368533 NFS1Q9Y697 457 aa11.2□□□□□ -0.62
TPM3-212ENST00000368533 TCRBV7S2A1N4TA0A589 114 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms