RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 C4orf50Q6ZRC1 276 aa17.15■□□□□ 0.34
CKS1B-202ENST00000368436 SCN4BQ8IWT1 228 aa17.15■□□□□ 0.34
CKS1B-202ENST00000368436 FAM160A2Q8N612 972 aaPredicted RBP17.15■□□□□ 0.34
CKS1B-202ENST00000368436 SPATA17Q96L03 361 aa17.15■□□□□ 0.34
CKS1B-202ENST00000368436 CEP295NLQ96MC4 621 aa17.15■□□□□ 0.34
CKS1B-202ENST00000368436 CYP2S1Q96SQ9 504 aa17.15■□□□□ 0.34
CKS1B-202ENST00000368436 SYT15Q9BQS2 421 aa17.15■□□□□ 0.34
CKS1B-202ENST00000368436 CRTAC1Q9NQ79 661 aa17.15■□□□□ 0.34
CKS1B-202ENST00000368436 SEMA4GQ9NTN9 838 aa17.15■□□□□ 0.34
CKS1B-202ENST00000368436 TFIP11Q9UBB9 837 aaKnown RBP17.15■□□□□ 0.34
CKS1B-202ENST00000368436 MAGEC2Q9UBF1 373 aaPredicted RBP17.15■□□□□ 0.34
CKS1B-202ENST00000368436 R3HCC1Q9Y3T6 440 aaKnown RBP17.15■□□□□ 0.34
CKS1B-202ENST00000368436 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.15■□□□□ 0.34
CKS1B-202ENST00000368436 SPAG17Q6Q759 2223 aa17.15■□□□□ 0.34
CKS1B-202ENST00000368436 TRAV19A0A0A6YYK7 116 aa17.14■□□□□ 0.33
CKS1B-202ENST00000368436 TGFB1I1O43294 461 aa17.14■□□□□ 0.33
CKS1B-202ENST00000368436 CUTAO60888 179 aa17.14■□□□□ 0.33
CKS1B-202ENST00000368436 YEATS4O95619 227 aa17.14■□□□□ 0.33
CKS1B-202ENST00000368436 EGFP01133 1207 aa17.14■□□□□ 0.33
CKS1B-202ENST00000368436 TCF3P15923 654 aa17.14■□□□□ 0.33
CKS1B-202ENST00000368436 DRD1P21728 446 aa17.14■□□□□ 0.33
CKS1B-202ENST00000368436 GJA4P35212 333 aa17.14■□□□□ 0.33
CKS1B-202ENST00000368436 USP4Q13107 963 aa17.14■□□□□ 0.33
CKS1B-202ENST00000368436 MAPRE1Q15691 268 aaKnown RBP17.14■□□□□ 0.33
CKS1B-202ENST00000368436 SHC4Q6S5L8 630 aa17.14■□□□□ 0.33
CKS1B-202ENST00000368436 TRAPPC11Q7Z392 1133 aa17.14■□□□□ 0.33
CKS1B-202ENST00000368436 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.14■□□□□ 0.33
CKS1B-202ENST00000368436 FSIP1Q8NA03 581 aa17.14■□□□□ 0.33
CKS1B-202ENST00000368436 IQUBQ8NA54 791 aa17.14■□□□□ 0.33
CKS1B-202ENST00000368436 OSCP1Q8WVF1 389 aa17.14■□□□□ 0.33
CKS1B-202ENST00000368436 MYLPFQ96A32 169 aa17.14■□□□□ 0.33
CKS1B-202ENST00000368436 ZNF396Q96N95 335 aaPredicted RBP17.14■□□□□ 0.33
CKS1B-202ENST00000368436 C7orf25Q9BPX7 421 aa17.14■□□□□ 0.33
CKS1B-202ENST00000368436 BACH2Q9BYV9 841 aa17.14■□□□□ 0.33
CKS1B-202ENST00000368436 ECT2Q9H8V3 914 aa17.14■□□□□ 0.33
CKS1B-202ENST00000368436 TRPC7Q9HCX4 862 aa17.14■□□□□ 0.33
CKS1B-202ENST00000368436 CST3P01034 146 aaPredicted RBP17.13■□□□□ 0.33
CKS1B-202ENST00000368436 CKMP06732 381 aa17.13■□□□□ 0.33
CKS1B-202ENST00000368436 FAM163BP0C2L3 166 aa17.13■□□□□ 0.33
CKS1B-202ENST00000368436 PSMC1P62191 440 aaKnown RBP17.13■□□□□ 0.33
CKS1B-202ENST00000368436 SNRPFP62306 86 aaKnown RBP17.13■□□□□ 0.33
CKS1B-202ENST00000368436 EHHADHQ08426 723 aa17.13■□□□□ 0.33
CKS1B-202ENST00000368436 FAM26FQ5R3K3 315 aa17.13■□□□□ 0.33
CKS1B-202ENST00000368436 PRR23CQ6ZRP0 262 aa17.13■□□□□ 0.33
CKS1B-202ENST00000368436 CEP68Q76N32 757 aa17.13■□□□□ 0.33
CKS1B-202ENST00000368436 CPA6Q8N4T0 437 aa17.13■□□□□ 0.33
CKS1B-202ENST00000368436 ARL14EPQ8N8R7 260 aaPredicted RBP17.13■□□□□ 0.33
CKS1B-202ENST00000368436 NETO1Q8TDF5 533 aa17.13■□□□□ 0.33
CKS1B-202ENST00000368436 GAB3Q8WWW8 586 aa17.13■□□□□ 0.33
CKS1B-202ENST00000368436 EXOC4Q96A65 974 aa17.13■□□□□ 0.33
CKS1B-202ENST00000368436 DHX58Q96C10 678 aa17.13■□□□□ 0.33
CKS1B-202ENST00000368436 P2RY13Q9BPV8 354 aa17.13■□□□□ 0.33
CKS1B-202ENST00000368436 AGPAT3Q9NRZ7 376 aa17.13■□□□□ 0.33
CKS1B-202ENST00000368436 DUS2Q9NX74 493 aaKnown RBP17.13■□□□□ 0.33
CKS1B-202ENST00000368436 SLC8A2Q9UPR5 921 aa17.13■□□□□ 0.33
CKS1B-202ENST00000368436 NCOR2Q9Y618 2525 aa17.13■□□□□ 0.33
CKS1B-202ENST00000368436 DCDC2BA2VCK2 349 aa17.12■□□□□ 0.33
CKS1B-202ENST00000368436 C2orf78A6NCI8 922 aa17.12■□□□□ 0.33
CKS1B-202ENST00000368436 SLC30A4O14863 429 aa17.12■□□□□ 0.33
CKS1B-202ENST00000368436 FOXD2O60548 495 aaPredicted RBP17.12■□□□□ 0.33
CKS1B-202ENST00000368436 RNF40O75150 1001 aa17.12■□□□□ 0.33
CKS1B-202ENST00000368436 PDGFRBP09619 1106 aa17.12■□□□□ 0.33
CKS1B-202ENST00000368436 PFKLP17858 780 aa17.12■□□□□ 0.33
CKS1B-202ENST00000368436 BDNFP23560 247 aa17.12■□□□□ 0.33
CKS1B-202ENST00000368436 ASIC1P78348 528 aa17.12■□□□□ 0.33
CKS1B-202ENST00000368436 PSMD6Q15008 389 aa17.12■□□□□ 0.33
CKS1B-202ENST00000368436 SNRNP35Q16560 246 aaKnown RBP17.12■□□□□ 0.33
CKS1B-202ENST00000368436 EML3Q32P44 896 aa17.12■□□□□ 0.33
CKS1B-202ENST00000368436 FBXO43Q4G163 708 aa17.12■□□□□ 0.33
CKS1B-202ENST00000368436 NAIF1Q69YI7 327 aaPredicted RBP17.12■□□□□ 0.33
CKS1B-202ENST00000368436 CAMKK1Q8N5S9 505 aa17.12■□□□□ 0.33
CKS1B-202ENST00000368436 MYCBPAPQ8TBZ2 947 aa17.12■□□□□ 0.33
CKS1B-202ENST00000368436 SCFD1Q8WVM8 642 aa17.12■□□□□ 0.33
CKS1B-202ENST00000368436 EZH1Q92800 747 aaPredicted RBP17.12■□□□□ 0.33
CKS1B-202ENST00000368436 ATP2A3Q93084 1043 aa17.12■□□□□ 0.33
CKS1B-202ENST00000368436 PCED1BQ96HM7 432 aa17.12■□□□□ 0.33
CKS1B-202ENST00000368436 LOXL4Q96JB6 756 aa17.12■□□□□ 0.33
CKS1B-202ENST00000368436 CGRRF1Q99675 332 aa17.12■□□□□ 0.33
CKS1B-202ENST00000368436 ARHGAP26Q9UNA1 814 aa17.12■□□□□ 0.33
CKS1B-202ENST00000368436 NME7Q9Y5B8 376 aa17.12■□□□□ 0.33
CKS1B-202ENST00000368436 WNT6Q9Y6F9 365 aa17.12■□□□□ 0.33
CKS1B-202ENST00000368436 UBE4BO95155 1302 aa17.12■□□□□ 0.33
CKS1B-202ENST00000368436 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.11■□□□□ 0.33
CKS1B-202ENST00000368436 TACC1O75410 805 aa17.11■□□□□ 0.33
CKS1B-202ENST00000368436 AKAP3O75969 853 aa17.11■□□□□ 0.33
CKS1B-202ENST00000368436 HDCP19113 662 aa17.11■□□□□ 0.33
CKS1B-202ENST00000368436 GNL1P36915 607 aaPredicted RBP17.11■□□□□ 0.33
CKS1B-202ENST00000368436 GRIK1P39086 918 aa17.11■□□□□ 0.33
CKS1B-202ENST00000368436 IFNAR2P48551 515 aa17.11■□□□□ 0.33
CKS1B-202ENST00000368436 PXNP49023 591 aaPredicted RBP17.11■□□□□ 0.33
CKS1B-202ENST00000368436 CYP27A1Q02318 531 aa17.11■□□□□ 0.33
CKS1B-202ENST00000368436 CYP24A1Q07973 514 aa17.11■□□□□ 0.33
CKS1B-202ENST00000368436 DENND5BQ6ZUT9 1274 aa17.11■□□□□ 0.33
CKS1B-202ENST00000368436 UNC13DQ70J99 1090 aa17.11■□□□□ 0.33
CKS1B-202ENST00000368436 CACNA2D4Q7Z3S7 1137 aa17.11■□□□□ 0.33
CKS1B-202ENST00000368436 RDH13Q8NBN7 331 aa17.11■□□□□ 0.33
CKS1B-202ENST00000368436 SH3RF2Q8TEC5 729 aa17.11■□□□□ 0.33
CKS1B-202ENST00000368436 CD101Q93033 1021 aa17.11■□□□□ 0.33
CKS1B-202ENST00000368436 MMS19Q96T76 1030 aa17.11■□□□□ 0.33
CKS1B-202ENST00000368436 MRPL45Q9BRJ2 306 aaKnown RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms