RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 SLC16A2P36021 539 aa8.98□□□□□ -0.97
SYNE1-206ENST00000367253 OCRLQ01968 901 aa8.98□□□□□ -0.97
SYNE1-206ENST00000367253 FCHO2Q0JRZ9 810 aa8.98□□□□□ -0.97
SYNE1-206ENST00000367253 MORC3Q14149 939 aa8.98□□□□□ -0.97
SYNE1-206ENST00000367253 ERICH5Q6P6B1 374 aa8.98□□□□□ -0.97
SYNE1-206ENST00000367253 FBXO46Q6PJ61 603 aaPredicted RBP8.98□□□□□ -0.97
SYNE1-206ENST00000367253 CRLF3Q8IUI8 442 aa8.98□□□□□ -0.97
SYNE1-206ENST00000367253 ARNTL2Q8WYA1 636 aa8.98□□□□□ -0.97
SYNE1-206ENST00000367253 ADNPQ9H2P0 1102 aa8.98□□□□□ -0.97
SYNE1-206ENST00000367253 COPS7BQ9H9Q2 264 aaPredicted RBP8.98□□□□□ -0.97
SYNE1-206ENST00000367253 ASAH2Q9NR71 780 aa8.98□□□□□ -0.97
SYNE1-206ENST00000367253 WDR37Q9Y2I8 494 aa8.98□□□□□ -0.97
SYNE1-206ENST00000367253 SLC30A1Q9Y6M5 507 aa8.98□□□□□ -0.97
SYNE1-206ENST00000367253 SUPT3HB4E1H0 165 aa8.97□□□□□ -0.97
SYNE1-206ENST00000367253 ZNF263O14978 683 aa8.97□□□□□ -0.97
SYNE1-206ENST00000367253 ADCY6O43306 1168 aa8.97□□□□□ -0.97
SYNE1-206ENST00000367253 S100A5P33763 92 aa8.97□□□□□ -0.97
SYNE1-206ENST00000367253 PRELPP51888 382 aa8.97□□□□□ -0.97
SYNE1-206ENST00000367253 C1QTNF8P60827 252 aa8.97□□□□□ -0.97
SYNE1-206ENST00000367253 TP53BP2Q13625 1128 aa8.97□□□□□ -0.97
SYNE1-206ENST00000367253 SPARCL1Q14515 664 aa8.97□□□□□ -0.97
SYNE1-206ENST00000367253 ALKBH2Q6NS38 261 aa8.97□□□□□ -0.97
SYNE1-206ENST00000367253 DUS1LQ6P1R4 473 aaKnown RBP8.97□□□□□ -0.97
SYNE1-206ENST00000367253 ZNF655Q8N720 491 aaPredicted RBP8.97□□□□□ -0.97
SYNE1-206ENST00000367253 FERD3LQ96RJ6 166 aa8.97□□□□□ -0.97
SYNE1-206ENST00000367253 NMRK2Q9NPI5 230 aa8.97□□□□□ -0.97
SYNE1-206ENST00000367253 AOX1Q06278 1338 aa8.97□□□□□ -0.97
SYNE1-206ENST00000367253 USP42Q9H9J4 1324 aaKnown RBP8.97□□□□□ -0.97
SYNE1-206ENST00000367253 EXOC1LA0A1B0GW35 172 aa8.97□□□□□ -0.97
SYNE1-206ENST00000367253 EXTL3O43909 919 aa8.97□□□□□ -0.97
SYNE1-206ENST00000367253 CCNB2O95067 398 aa8.97□□□□□ -0.97
SYNE1-206ENST00000367253 IRF1P10914 325 aa8.97□□□□□ -0.97
SYNE1-206ENST00000367253 GARTP22102 1010 aa8.97□□□□□ -0.97
SYNE1-206ENST00000367253 JAK1P23458 1154 aa8.97□□□□□ -0.97
SYNE1-206ENST00000367253 DUSP3P51452 185 aaPredicted RBP8.97□□□□□ -0.97
SYNE1-206ENST00000367253 ABATP80404 500 aa8.97□□□□□ -0.97
SYNE1-206ENST00000367253 ROR2Q01974 943 aaKnown RBP8.97□□□□□ -0.97
SYNE1-206ENST00000367253 GUCY1A3Q02108 690 aa8.97□□□□□ -0.97
SYNE1-206ENST00000367253 CXCL9Q07325 125 aa8.97□□□□□ -0.97
SYNE1-206ENST00000367253 KYNUQ16719 465 aa8.97□□□□□ -0.97
SYNE1-206ENST00000367253 HIST2H2ACQ16777 129 aaPredicted RBP8.97□□□□□ -0.97
SYNE1-206ENST00000367253 TTC23Q5W5X9 447 aa8.97□□□□□ -0.97
SYNE1-206ENST00000367253 HIST2H2AA3Q6FI13 130 aa8.97□□□□□ -0.97
SYNE1-206ENST00000367253 KRT77Q7Z794 578 aa8.97□□□□□ -0.97
SYNE1-206ENST00000367253 TDRD5Q8NAT2 981 aaKnown RBP8.97□□□□□ -0.97
SYNE1-206ENST00000367253 SMG7Q92540 1137 aaKnown RBP8.97□□□□□ -0.97
SYNE1-206ENST00000367253 PRRX2Q99811 253 aa8.97□□□□□ -0.97
SYNE1-206ENST00000367253 LRRC14BA6NHZ5 514 aa8.97□□□□□ -0.97
SYNE1-206ENST00000367253 TSC22D2O75157 780 aa8.97□□□□□ -0.97
SYNE1-206ENST00000367253 PFKMP08237 780 aa8.97□□□□□ -0.97
SYNE1-206ENST00000367253 IMPDH2P12268 514 aa8.97□□□□□ -0.97
SYNE1-206ENST00000367253 PHKA1P46020 1223 aa8.97□□□□□ -0.97
SYNE1-206ENST00000367253 COBLL1Q53SF7 1204 aa8.97□□□□□ -0.97
SYNE1-206ENST00000367253 ARSHQ5FYA8 562 aa8.97□□□□□ -0.97
SYNE1-206ENST00000367253 CD99L2Q8TCZ2 262 aa8.97□□□□□ -0.97
SYNE1-206ENST00000367253 ATOH1Q92858 354 aaPredicted RBP8.97□□□□□ -0.97
SYNE1-206ENST00000367253 GAD1Q99259 594 aa8.97□□□□□ -0.97
SYNE1-206ENST00000367253 PCMTD2Q9NV79 361 aa8.97□□□□□ -0.97
SYNE1-206ENST00000367253 NDOR1Q9UHB4 597 aa8.97□□□□□ -0.97
SYNE1-206ENST00000367253 ZMYM5Q9UJ78 669 aa8.97□□□□□ -0.97
SYNE1-206ENST00000367253 ZFP69BQ9UJL9 534 aa8.97□□□□□ -0.97
SYNE1-206ENST00000367253 KIF20BQ96Q89 1820 aa8.97□□□□□ -0.97
SYNE1-206ENST00000367253 A0A0G2JND7 137 aa8.97□□□□□ -0.97
SYNE1-206ENST00000367253 CYP27B1O15528 508 aa8.97□□□□□ -0.97
SYNE1-206ENST00000367253 IL33O95760 270 aa8.97□□□□□ -0.97
SYNE1-206ENST00000367253 CYP19A1P11511 503 aaPredicted RBP8.97□□□□□ -0.97
SYNE1-206ENST00000367253 TBXAS1P24557 533 aaPredicted RBP8.97□□□□□ -0.97
SYNE1-206ENST00000367253 ADARP55265 1226 aaKnown RBP8.97□□□□□ -0.97
SYNE1-206ENST00000367253 PNOCQ13519 176 aa8.97□□□□□ -0.97
SYNE1-206ENST00000367253 PTGISQ16647 500 aa8.97□□□□□ -0.97
SYNE1-206ENST00000367253 MFSD14AQ96MC6 490 aa8.97□□□□□ -0.97
SYNE1-206ENST00000367253 LRRC37BQ96QE4 947 aa8.97□□□□□ -0.97
SYNE1-206ENST00000367253 FMO2Q99518 471 aa8.97□□□□□ -0.97
SYNE1-206ENST00000367253 ETNK1Q9HBU6 452 aa8.97□□□□□ -0.97
SYNE1-206ENST00000367253 ZCCHC17Q9NP64 241 aaKnown RBP8.97□□□□□ -0.97
SYNE1-206ENST00000367253 DMAP1Q9NPF5 467 aaPredicted RBP8.97□□□□□ -0.97
SYNE1-206ENST00000367253 NDFIP2Q9NV92 336 aa8.97□□□□□ -0.97
SYNE1-206ENST00000367253 LNPEPQ9UIQ6 1025 aa8.97□□□□□ -0.97
SYNE1-206ENST00000367253 ZNF232Q9UNY5 417 aa8.97□□□□□ -0.97
SYNE1-206ENST00000367253 V9GYQ6 96 aa8.97□□□□□ -0.97
SYNE1-206ENST00000367253 CLASP2O75122 1294 aaKnown RBP8.96□□□□□ -0.97
SYNE1-206ENST00000367253 CFIP05156 583 aa8.96□□□□□ -0.97
SYNE1-206ENST00000367253 SERPIND1P05546 499 aa8.96□□□□□ -0.97
SYNE1-206ENST00000367253 CPA1P15085 419 aa8.96□□□□□ -0.97
SYNE1-206ENST00000367253 ACAT1P24752 427 aaKnown RBP8.96□□□□□ -0.97
SYNE1-206ENST00000367253 PTPN3P26045 913 aa8.96□□□□□ -0.97
SYNE1-206ENST00000367253 ANXA11P50995 505 aaKnown RBP8.96□□□□□ -0.97
SYNE1-206ENST00000367253 SMAD1Q15797 465 aaKnown RBP8.96□□□□□ -0.97
SYNE1-206ENST00000367253 FXNQ16595 210 aa8.96□□□□□ -0.97
SYNE1-206ENST00000367253 FSCN1Q16658 493 aaKnown RBP8.96□□□□□ -0.97
SYNE1-206ENST00000367253 PLEKHM3Q6ZWE6 761 aa8.96□□□□□ -0.97
SYNE1-206ENST00000367253 STX19Q8N4C7 294 aa8.96□□□□□ -0.97
SYNE1-206ENST00000367253 SLC22A8Q8TCC7 542 aa8.96□□□□□ -0.97
SYNE1-206ENST00000367253 PHF21AQ96BD5 680 aa8.96□□□□□ -0.97
SYNE1-206ENST00000367253 S100PBPQ96BU1 408 aa8.96□□□□□ -0.97
SYNE1-206ENST00000367253 TDRD1Q9BXT4 1180 aaKnown RBP8.96□□□□□ -0.97
SYNE1-206ENST00000367253 SPTLC3Q9NUV7 552 aa8.96□□□□□ -0.97
SYNE1-206ENST00000367253 SUN2Q9UH99 717 aa8.96□□□□□ -0.97
SYNE1-206ENST00000367253 UBQLN1Q9UMX0 589 aaKnown RBP8.96□□□□□ -0.97
SYNE1-206ENST00000367253 PLAAQ9Y263 795 aa8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms