RNA–Protein interactions for RNA: ENST00000366862.9

FBXO28-201, Transcript of F-box protein 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FBXO28, Length 5,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-201ENST00000366862 SUGT1Q9Y2Z0 365 aa16.29■□□□□ 0.2
FBXO28-201ENST00000366862 RNF103O00237 685 aa16.29■□□□□ 0.2
FBXO28-201ENST00000366862 TIMM44O43615 452 aa16.29■□□□□ 0.2
FBXO28-201ENST00000366862 ITGA4P13612 1032 aa16.29■□□□□ 0.2
FBXO28-201ENST00000366862 RPL21P46778 160 aaKnown RBP16.29■□□□□ 0.2
FBXO28-201ENST00000366862 WDR72Q3MJ13 1102 aa16.29■□□□□ 0.2
FBXO28-201ENST00000366862 HEATR4Q86WZ0 1026 aa16.29■□□□□ 0.2
FBXO28-201ENST00000366862 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.29■□□□□ 0.2
FBXO28-201ENST00000366862 SCFD2Q8WU76 684 aa16.29■□□□□ 0.2
FBXO28-201ENST00000366862 RSPH1Q8WYR4 309 aa16.29■□□□□ 0.2
FBXO28-201ENST00000366862 PDZK1P1A8MUH7 402 aa16.29■□□□□ 0.2
FBXO28-201ENST00000366862 DNALI1O14645 258 aaPredicted RBP16.29■□□□□ 0.2
FBXO28-201ENST00000366862 ANO4Q32M45 955 aa16.29■□□□□ 0.2
FBXO28-201ENST00000366862 ZNF662Q6ZS27 426 aa16.29■□□□□ 0.2
FBXO28-201ENST00000366862 ZNF513Q8N8E2 541 aaPredicted RBP16.29■□□□□ 0.2
FBXO28-201ENST00000366862 ZNF75CPQ92670 426 aaPredicted RBP16.29■□□□□ 0.2
FBXO28-201ENST00000366862 TNIP3Q96KP6 325 aa16.29■□□□□ 0.2
FBXO28-201ENST00000366862 HEATR9A2RTY3 570 aa16.29■□□□□ 0.2
FBXO28-201ENST00000366862 LCP1P13796 627 aa16.29■□□□□ 0.2
FBXO28-201ENST00000366862 TRIM25Q14258 630 aaKnown RBP16.29■□□□□ 0.2
FBXO28-201ENST00000366862 BOLA3Q53S33 107 aa16.29■□□□□ 0.2
FBXO28-201ENST00000366862 SLC25A41Q8N5S1 370 aa16.29■□□□□ 0.2
FBXO28-201ENST00000366862 MTERF3Q96E29 417 aa16.29■□□□□ 0.2
FBXO28-201ENST00000366862 OSGEPQ9NPF4 335 aa16.29■□□□□ 0.2
FBXO28-201ENST00000366862 SETBP1Q9Y6X0 1596 aa16.28■□□□□ 0.2
FBXO28-201ENST00000366862 LAMC2Q13753 1193 aa16.28■□□□□ 0.2
FBXO28-201ENST00000366862 NAPEPLDQ6IQ20 393 aa16.28■□□□□ 0.2
FBXO28-201ENST00000366862 OR6Y1Q8NGX8 325 aa16.28■□□□□ 0.2
FBXO28-201ENST00000366862 MED15Q96RN5 788 aa16.28■□□□□ 0.2
FBXO28-201ENST00000366862 C1orf50Q9BV19 199 aa16.28■□□□□ 0.2
FBXO28-201ENST00000366862 AGXT2Q9BYV1 514 aa16.28■□□□□ 0.2
FBXO28-201ENST00000366862 ATXN10Q9UBB4 475 aa16.28■□□□□ 0.2
FBXO28-201ENST00000366862 SLC8A2Q9UPR5 921 aa16.28■□□□□ 0.2
FBXO28-201ENST00000366862 E2F8A0AVK6 867 aa16.28■□□□□ 0.2
FBXO28-201ENST00000366862 EVPLLA8MZ36 301 aa16.28■□□□□ 0.2
FBXO28-201ENST00000366862 RGS5O15539 181 aa16.28■□□□□ 0.2
FBXO28-201ENST00000366862 PHGDHO43175 533 aaKnown RBP16.28■□□□□ 0.2
FBXO28-201ENST00000366862 FASP25445 335 aa16.28■□□□□ 0.2
FBXO28-201ENST00000366862 FBXL16Q8N461 479 aa16.28■□□□□ 0.2
FBXO28-201ENST00000366862 APOPT1Q96IL0 206 aa16.28■□□□□ 0.2
FBXO28-201ENST00000366862 ZNF560Q96MR9 790 aa16.28■□□□□ 0.2
FBXO28-201ENST00000366862 AGPAT3Q9NRZ7 376 aa16.28■□□□□ 0.2
FBXO28-201ENST00000366862 MTMR4Q9NYA4 1195 aa16.28■□□□□ 0.2
FBXO28-201ENST00000366862 CTNNAL1Q9UBT7 734 aa16.28■□□□□ 0.2
FBXO28-201ENST00000366862 DRD4P21917 467 aa16.28■□□□□ 0.2
FBXO28-201ENST00000366862 CRKP46108 304 aa16.28■□□□□ 0.2
FBXO28-201ENST00000366862 TP53BP2Q13625 1128 aa16.28■□□□□ 0.2
FBXO28-201ENST00000366862 DPP9Q86TI2 863 aa16.28■□□□□ 0.2
FBXO28-201ENST00000366862 NRDE2Q9H7Z3 1164 aa16.28■□□□□ 0.2
FBXO28-201ENST00000366862 CD209Q9NNX6 404 aa16.28■□□□□ 0.2
FBXO28-201ENST00000366862 ACTL7BQ9Y614 415 aa16.28■□□□□ 0.2
FBXO28-201ENST00000366862 CYP27B1O15528 508 aa16.28■□□□□ 0.2
FBXO28-201ENST00000366862 CDC25CP30307 473 aa16.28■□□□□ 0.2
FBXO28-201ENST00000366862 SKIV2L2P42285 1042 aaKnown RBP16.28■□□□□ 0.2
FBXO28-201ENST00000366862 PTGER2P43116 358 aa16.28■□□□□ 0.2
FBXO28-201ENST00000366862 THEMIS2Q5TEJ8 643 aa16.28■□□□□ 0.2
FBXO28-201ENST00000366862 SH3TC2Q8TF17 1288 aa16.28■□□□□ 0.2
FBXO28-201ENST00000366862 RAD21L1Q9H4I0 556 aa16.28■□□□□ 0.2
FBXO28-201ENST00000366862 PLGRKTQ9HBL7 147 aa16.28■□□□□ 0.2
FBXO28-201ENST00000366862 HMG20AQ9NP66 347 aa16.28■□□□□ 0.2
FBXO28-201ENST00000366862 FBXO40Q9UH90 709 aa16.28■□□□□ 0.2
FBXO28-201ENST00000366862 CHORDC1Q9UHD1 332 aaPredicted RBP16.28■□□□□ 0.2
FBXO28-201ENST00000366862 V9GYQ6 96 aa16.28■□□□□ 0.2
FBXO28-201ENST00000366862 EEF2KO00418 725 aaKnown RBP16.27■□□□□ 0.2
FBXO28-201ENST00000366862 SGPL1O95470 568 aa16.27■□□□□ 0.2
FBXO28-201ENST00000366862 CNGA2Q16280 664 aa16.27■□□□□ 0.2
FBXO28-201ENST00000366862 KCTD21Q4G0X4 260 aa16.27■□□□□ 0.2
FBXO28-201ENST00000366862 SPDYAQ5MJ70 313 aa16.27■□□□□ 0.2
FBXO28-201ENST00000366862 GPAT2Q6NUI2 795 aa16.27■□□□□ 0.2
FBXO28-201ENST00000366862 EEPD1Q7L9B9 569 aa16.27■□□□□ 0.2
FBXO28-201ENST00000366862 LINC00523Q86TU6 105 aa16.27■□□□□ 0.2
FBXO28-201ENST00000366862 ZNF398Q8TD17 642 aa16.27■□□□□ 0.2
FBXO28-201ENST00000366862 PDCD6IPQ8WUM4 868 aaKnown RBP16.27■□□□□ 0.2
FBXO28-201ENST00000366862 DLG3Q92796 817 aa16.27■□□□□ 0.2
FBXO28-201ENST00000366862 LRRC39Q96DD0 335 aa16.27■□□□□ 0.2
FBXO28-201ENST00000366862 FAM84BQ96KN1 310 aaPredicted RBP16.27■□□□□ 0.2
FBXO28-201ENST00000366862 DCUN1D5Q9BTE7 237 aa16.27■□□□□ 0.2
FBXO28-201ENST00000366862 AP5M1Q9H0R1 490 aa16.27■□□□□ 0.2
FBXO28-201ENST00000366862 THAP1Q9NVV9 213 aa16.27■□□□□ 0.2
FBXO28-201ENST00000366862 NINJ2Q9NZG7 142 aa16.27■□□□□ 0.2
FBXO28-201ENST00000366862 TUBGCP4Q9UGJ1 667 aa16.27■□□□□ 0.2
FBXO28-201ENST00000366862 SUPT3HB4E1H0 165 aa16.27■□□□□ 0.2
FBXO28-201ENST00000366862 C5orf58C9J3I9 102 aa16.27■□□□□ 0.2
FBXO28-201ENST00000366862 UNC13BO14795 1591 aa16.27■□□□□ 0.2
FBXO28-201ENST00000366862 MTM1Q13496 603 aa16.27■□□□□ 0.2
FBXO28-201ENST00000366862 ZNF235Q14590 738 aa16.27■□□□□ 0.2
FBXO28-201ENST00000366862 SMTNL2Q2TAL5 461 aa16.27■□□□□ 0.2
FBXO28-201ENST00000366862 AGAP9Q5VTM2 703 aa16.27■□□□□ 0.2
FBXO28-201ENST00000366862 SALL3Q9BXA9 1300 aa16.27■□□□□ 0.2
FBXO28-201ENST00000366862 SLAIN2Q9P270 581 aa16.27■□□□□ 0.2
FBXO28-201ENST00000366862 FAM196BA6NMK8 535 aa16.27■□□□□ 0.19
FBXO28-201ENST00000366862 NCKAP1LP55160 1127 aa16.27■□□□□ 0.19
FBXO28-201ENST00000366862 MMRN1Q13201 1228 aa16.27■□□□□ 0.19
FBXO28-201ENST00000366862 DGUOKQ16854 277 aa16.27■□□□□ 0.19
FBXO28-201ENST00000366862 TTC27Q6P3X3 843 aa16.27■□□□□ 0.19
FBXO28-201ENST00000366862 LRRC8DQ7L1W4 858 aa16.27■□□□□ 0.19
FBXO28-201ENST00000366862 TCP10LQ8TDR4 215 aa16.27■□□□□ 0.19
FBXO28-201ENST00000366862 RAVER2Q9HCJ3 691 aaKnown RBP16.27■□□□□ 0.19
FBXO28-201ENST00000366862 SORCS3Q9UPU3 1222 aa16.27■□□□□ 0.19
FBXO28-201ENST00000366862 TBC1D12O60347 775 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms