RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 SLC26A11Q86WA9 606 aa12.5□□□□□ -0.41
CDC42BPA-203ENST00000366766 RTFDC1Q9BY42 306 aaPredicted RBP12.5□□□□□ -0.41
CDC42BPA-203ENST00000366766 SLC40A1Q9NP59 571 aa12.5□□□□□ -0.41
CDC42BPA-203ENST00000366766 FNDC3AQ9Y2H6 1198 aaKnown RBP12.5□□□□□ -0.41
CDC42BPA-203ENST00000366766 ROBO3Q96MS0 1386 aa12.5□□□□□ -0.41
CDC42BPA-203ENST00000366766 KCNQ2O43526 872 aa12.5□□□□□ -0.41
CDC42BPA-203ENST00000366766 TKTP29401 623 aaKnown RBP12.5□□□□□ -0.41
CDC42BPA-203ENST00000366766 GRIN1Q05586 938 aa12.5□□□□□ -0.41
CDC42BPA-203ENST00000366766 GLB1LQ6UWU2 654 aa12.5□□□□□ -0.41
CDC42BPA-203ENST00000366766 LRRC43Q8N309 656 aa12.5□□□□□ -0.41
CDC42BPA-203ENST00000366766 THOC1Q96FV9 657 aaKnown RBP12.5□□□□□ -0.41
CDC42BPA-203ENST00000366766 ACTL7BQ9Y614 415 aa12.5□□□□□ -0.41
CDC42BPA-203ENST00000366766 NKRFO15226 690 aaKnown RBP eCLIP12.5□□□□□ -0.41
CDC42BPA-203ENST00000366766 FKBP6O75344 327 aa12.5□□□□□ -0.41
CDC42BPA-203ENST00000366766 TTLL9Q3SXZ7 439 aa12.5□□□□□ -0.41
CDC42BPA-203ENST00000366766 MRNIPQ6NTE8 343 aa12.5□□□□□ -0.41
CDC42BPA-203ENST00000366766 LRRC39Q96DD0 335 aa12.5□□□□□ -0.41
CDC42BPA-203ENST00000366766 SEMA6BQ9H3T3 888 aa12.5□□□□□ -0.41
CDC42BPA-203ENST00000366766 INPP5FQ9Y2H2 1132 aa12.5□□□□□ -0.41
CDC42BPA-203ENST00000366766 SRP72O76094 671 aaKnown RBP12.5□□□□□ -0.41
CDC42BPA-203ENST00000366766 PKN1Q16512 942 aa12.5□□□□□ -0.41
CDC42BPA-203ENST00000366766 C4orf33Q8N1A6 199 aa12.5□□□□□ -0.41
CDC42BPA-203ENST00000366766 PPP1R16BQ96T49 567 aa12.5□□□□□ -0.41
CDC42BPA-203ENST00000366766 ZNF556Q9HAH1 456 aa12.5□□□□□ -0.41
CDC42BPA-203ENST00000366766 ALDH1A1P00352 501 aa12.5□□□□□ -0.41
CDC42BPA-203ENST00000366766 THRAP10827 490 aa12.5□□□□□ -0.41
CDC42BPA-203ENST00000366766 NAA20P61599 178 aa12.5□□□□□ -0.41
CDC42BPA-203ENST00000366766 LCA5Q86VQ0 697 aa12.5□□□□□ -0.41
CDC42BPA-203ENST00000366766 SOAT2O75908 522 aa12.49□□□□□ -0.41
CDC42BPA-203ENST00000366766 CSTF3Q12996 717 aaKnown RBP12.49□□□□□ -0.41
CDC42BPA-203ENST00000366766 KRT72Q14CN4 511 aa12.49□□□□□ -0.41
CDC42BPA-203ENST00000366766 TRIM69Q86WT6 500 aa12.49□□□□□ -0.41
CDC42BPA-203ENST00000366766 THTPAQ9BU02 230 aa12.49□□□□□ -0.41
CDC42BPA-203ENST00000366766 COG4Q9H9E3 785 aa12.49□□□□□ -0.41
CDC42BPA-203ENST00000366766 SORCS3Q9UPU3 1222 aa12.49□□□□□ -0.41
CDC42BPA-203ENST00000366766 S100A5P33763 92 aa12.49□□□□□ -0.41
CDC42BPA-203ENST00000366766 KLK7P49862 253 aa12.49□□□□□ -0.41
CDC42BPA-203ENST00000366766 PEX5P50542 639 aa12.49□□□□□ -0.41
CDC42BPA-203ENST00000366766 SLC7A14Q8TBB6 771 aa12.49□□□□□ -0.41
CDC42BPA-203ENST00000366766 PLEKP08567 350 aaPredicted RBP12.49□□□□□ -0.41
CDC42BPA-203ENST00000366766 RBP1P09455 135 aa12.49□□□□□ -0.41
CDC42BPA-203ENST00000366766 SCTRP47872 440 aa12.49□□□□□ -0.41
CDC42BPA-203ENST00000366766 SKOR1P84550 965 aa12.49□□□□□ -0.41
CDC42BPA-203ENST00000366766 CDK16Q00536 496 aa12.49□□□□□ -0.41
CDC42BPA-203ENST00000366766 DCAF6Q58WW2 860 aa12.49□□□□□ -0.41
CDC42BPA-203ENST00000366766 ZPBP2Q6X784 338 aa12.49□□□□□ -0.41
CDC42BPA-203ENST00000366766 SLC22A9Q8IVM8 553 aa12.49□□□□□ -0.41
CDC42BPA-203ENST00000366766 TRIM49D1C9J1S8 452 aa12.49□□□□□ -0.41
CDC42BPA-203ENST00000366766 NEMP1O14524 444 aa12.49□□□□□ -0.41
CDC42BPA-203ENST00000366766 CCDC153Q494R4 210 aa12.49□□□□□ -0.41
CDC42BPA-203ENST00000366766 MPZL3Q6UWV2 235 aa12.49□□□□□ -0.41
CDC42BPA-203ENST00000366766 CDC26Q8NHZ8 85 aa12.49□□□□□ -0.41
CDC42BPA-203ENST00000366766 AENQ8WTP8 325 aaKnown RBP12.49□□□□□ -0.41
CDC42BPA-203ENST00000366766 VIL1P09327 827 aaKnown RBP12.49□□□□□ -0.41
CDC42BPA-203ENST00000366766 PAEPP09466 180 aa12.49□□□□□ -0.41
CDC42BPA-203ENST00000366766 PRKCIP41743 596 aa12.49□□□□□ -0.41
CDC42BPA-203ENST00000366766 VCPP55072 806 aaKnown RBP12.49□□□□□ -0.41
CDC42BPA-203ENST00000366766 BACE1P56817 501 aa12.49□□□□□ -0.41
CDC42BPA-203ENST00000366766 HERVK_113P62684 666 aa12.49□□□□□ -0.41
CDC42BPA-203ENST00000366766 TAS2R42Q7RTR8 314 aa12.49□□□□□ -0.41
CDC42BPA-203ENST00000366766 CELF4Q9BZC1 486 aaKnown RBP12.49□□□□□ -0.41
CDC42BPA-203ENST00000366766 EFCAB1Q9HAE3 211 aa12.49□□□□□ -0.41
CDC42BPA-203ENST00000366766 NOD2Q9HC29 1040 aa12.49□□□□□ -0.41
CDC42BPA-203ENST00000366766 ABCC6O95255 1503 aa12.49□□□□□ -0.41
CDC42BPA-203ENST00000366766 UBA6A0AVT1 1052 aaPredicted RBP12.49□□□□□ -0.41
CDC42BPA-203ENST00000366766 NQO1P15559 274 aaKnown RBP12.49□□□□□ -0.41
CDC42BPA-203ENST00000366766 LBRQ14739 615 aaKnown RBP12.49□□□□□ -0.41
CDC42BPA-203ENST00000366766 ANKS3Q6ZW76 656 aa12.49□□□□□ -0.41
CDC42BPA-203ENST00000366766 PAWRQ96IZ0 340 aaKnown RBP12.49□□□□□ -0.41
CDC42BPA-203ENST00000366766 PRPF18Q99633 342 aaKnown RBP12.49□□□□□ -0.41
CDC42BPA-203ENST00000366766 LRRC40Q9H9A6 602 aa12.49□□□□□ -0.41
CDC42BPA-203ENST00000366766 ABT1Q9ULW3 272 aaKnown RBP12.49□□□□□ -0.41
CDC42BPA-203ENST00000366766 GCLCP48506 637 aaPredicted RBP12.49□□□□□ -0.41
CDC42BPA-203ENST00000366766 MREGQ8N565 214 aa12.49□□□□□ -0.41
CDC42BPA-203ENST00000366766 UNC45AQ9H3U1 944 aa12.49□□□□□ -0.41
CDC42BPA-203ENST00000366766 USP18Q9UMW8 372 aa12.49□□□□□ -0.41
CDC42BPA-203ENST00000366766 B2RBV5 119 aa12.49□□□□□ -0.41
CDC42BPA-203ENST00000366766 CYP3A4P08684 503 aa12.49□□□□□ -0.41
CDC42BPA-203ENST00000366766 NUP107P57740 925 aa12.49□□□□□ -0.41
CDC42BPA-203ENST00000366766 CLEC16AQ2KHT3 1053 aa12.49□□□□□ -0.41
CDC42BPA-203ENST00000366766 PRMT9Q6P2P2 845 aa12.49□□□□□ -0.41
CDC42BPA-203ENST00000366766 FAM71DQ8N9W8 422 aa12.49□□□□□ -0.41
CDC42BPA-203ENST00000366766 TARS2Q9BW92 718 aaKnown RBP12.49□□□□□ -0.41
CDC42BPA-203ENST00000366766 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.49□□□□□ -0.41
CDC42BPA-203ENST00000366766 TAF6LQ9Y6J9 622 aa12.49□□□□□ -0.41
CDC42BPA-203ENST00000366766 CNTRLQ7Z7A1 2325 aa12.49□□□□□ -0.41
CDC42BPA-203ENST00000366766 AKAP3O75969 853 aa12.48□□□□□ -0.41
CDC42BPA-203ENST00000366766 SUPT20HL2P0C7V6 817 aa12.48□□□□□ -0.41
CDC42BPA-203ENST00000366766 CYP2C9P11712 490 aa12.48□□□□□ -0.41
CDC42BPA-203ENST00000366766 CPB1P15086 417 aa12.48□□□□□ -0.41
CDC42BPA-203ENST00000366766 NPTX2P47972 431 aa12.48□□□□□ -0.41
CDC42BPA-203ENST00000366766 EFCAB12Q6NXP0 572 aa12.48□□□□□ -0.41
CDC42BPA-203ENST00000366766 ANKRD13AQ8IZ07 590 aa12.48□□□□□ -0.41
CDC42BPA-203ENST00000366766 SHCBP1Q8NEM2 672 aa12.48□□□□□ -0.41
CDC42BPA-203ENST00000366766 NDFIP2Q9NV92 336 aa12.48□□□□□ -0.41
CDC42BPA-203ENST00000366766 KRT8P05787 483 aa12.48□□□□□ -0.41
CDC42BPA-203ENST00000366766 STARD13Q9Y3M8 1113 aa12.48□□□□□ -0.41
CDC42BPA-203ENST00000366766 RARBP10826 455 aa12.48□□□□□ -0.41
CDC42BPA-203ENST00000366766 CASP7P55210 303 aa12.48□□□□□ -0.41
CDC42BPA-203ENST00000366766 TMC3Q7Z5M5 1100 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms