RNA–Protein interactions for RNA: ENST00000364005.1

RNU6-340P-201, Transcript of RNA, U6 small nuclear 340, pseudogene, humanhuman

BASIC

Gene RNU6-340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-340P-201ENST00000364005 SH3TC2Q8TF17 1288 aa0.35□□□□□ -2.35
RNU6-340P-201ENST00000364005 FAM136AQ96C01 138 aa0.35□□□□□ -2.35
RNU6-340P-201ENST00000364005 CCDC17Q96LX7 622 aa0.35□□□□□ -2.35
RNU6-340P-201ENST00000364005 MAGEB10Q96LZ2 347 aaPredicted RBP0.35□□□□□ -2.35
RNU6-340P-201ENST00000364005 ZNF599Q96NL3 588 aa0.35□□□□□ -2.35
RNU6-340P-201ENST00000364005 FYTTD1Q96QD9 318 aaKnown RBP0.35□□□□□ -2.35
RNU6-340P-201ENST00000364005 UHRF1Q96T88 793 aaPredicted RBP0.35□□□□□ -2.35
RNU6-340P-201ENST00000364005 PKP4Q99569 1192 aa0.35□□□□□ -2.35
RNU6-340P-201ENST00000364005 THAP7Q9BT49 309 aaPredicted RBP0.35□□□□□ -2.35
RNU6-340P-201ENST00000364005 LDAHQ9H6V9 325 aa0.35□□□□□ -2.35
RNU6-340P-201ENST00000364005 DDX31Q9H8H2 851 aaKnown RBP0.35□□□□□ -2.35
RNU6-340P-201ENST00000364005 TMEM248Q9NWD8 314 aa0.35□□□□□ -2.35
RNU6-340P-201ENST00000364005 HIF1ANQ9NWT6 349 aa0.35□□□□□ -2.35
RNU6-340P-201ENST00000364005 PLK2Q9NYY3 685 aa0.35□□□□□ -2.35
RNU6-340P-201ENST00000364005 TFCP2L1Q9NZI6 479 aa0.35□□□□□ -2.35
RNU6-340P-201ENST00000364005 PRSS50Q9UI38 385 aa0.35□□□□□ -2.35
RNU6-340P-201ENST00000364005 TMPRSS11EQ9UL52 423 aa0.35□□□□□ -2.35
RNU6-340P-201ENST00000364005 TP53TG3Q9ULZ0 132 aa0.35□□□□□ -2.35
RNU6-340P-201ENST00000364005 G3BP2Q9UN86 482 aaKnown RBP0.35□□□□□ -2.35
RNU6-340P-201ENST00000364005 DTX4Q9Y2E6 619 aa0.35□□□□□ -2.35
RNU6-340P-201ENST00000364005 INSL5Q9Y5Q6 135 aa0.35□□□□□ -2.35
RNU6-340P-201ENST00000364005 ACTL7AQ9Y615 435 aa0.35□□□□□ -2.35
RNU6-340P-201ENST00000364005 TRBV23-1A0A0A0MS06 115 aa0.34□□□□□ -2.36
RNU6-340P-201ENST00000364005 PTPDC1A2A3K4 754 aa0.34□□□□□ -2.36
RNU6-340P-201ENST00000364005 BTBD19C9JJ37 291 aa0.34□□□□□ -2.36
RNU6-340P-201ENST00000364005 M0R2C6 588 aa0.34□□□□□ -2.36
RNU6-340P-201ENST00000364005 AKR1B10O60218 316 aa0.34□□□□□ -2.36
RNU6-340P-201ENST00000364005 ZC3H11AO75152 810 aaKnown RBP eCLIP0.34□□□□□ -2.36
RNU6-340P-201ENST00000364005 SRSF10O75494 262 aaKnown RBP0.34□□□□□ -2.36
RNU6-340P-201ENST00000364005 GUCY1A2P33402 732 aa0.34□□□□□ -2.36
RNU6-340P-201ENST00000364005 PCYT1AP49585 367 aa0.34□□□□□ -2.36
RNU6-340P-201ENST00000364005 HLCSP50747 726 aa0.34□□□□□ -2.36
RNU6-340P-201ENST00000364005 DLK1P80370 383 aa0.34□□□□□ -2.36
RNU6-340P-201ENST00000364005 FANCCQ00597 558 aa0.34□□□□□ -2.36
RNU6-340P-201ENST00000364005 PMP22Q01453 160 aa0.34□□□□□ -2.36
RNU6-340P-201ENST00000364005 PPP3CAQ08209 521 aa0.34□□□□□ -2.36
RNU6-340P-201ENST00000364005 CRYZQ08257 329 aaKnown RBP0.34□□□□□ -2.36
RNU6-340P-201ENST00000364005 ST3GAL1Q11201 340 aa0.34□□□□□ -2.36
RNU6-340P-201ENST00000364005 TNNI3KQ59H18 835 aa0.34□□□□□ -2.36
RNU6-340P-201ENST00000364005 XKR4Q5GH76 650 aa0.34□□□□□ -2.36
RNU6-340P-201ENST00000364005 FAM209AQ5JX71 171 aa0.34□□□□□ -2.36
RNU6-340P-201ENST00000364005 RBM20Q5T481 1227 aaKnown RBP0.34□□□□□ -2.36
RNU6-340P-201ENST00000364005 L1TD1Q5T7N2 865 aaKnown RBP0.34□□□□□ -2.36
RNU6-340P-201ENST00000364005 NUGGCQ68CJ6 796 aa0.34□□□□□ -2.36
RNU6-340P-201ENST00000364005 FAM83HQ6ZRV2 1179 aaPredicted RBP0.34□□□□□ -2.36
RNU6-340P-201ENST00000364005 Q6ZVH6 145 aa0.34□□□□□ -2.36
RNU6-340P-201ENST00000364005 SLC41A1Q8IVJ1 513 aa0.34□□□□□ -2.36
RNU6-340P-201ENST00000364005 C11orf53Q8IXP5 236 aa0.34□□□□□ -2.36
RNU6-340P-201ENST00000364005 ZNF654Q8IZM8 581 aa0.34□□□□□ -2.36
RNU6-340P-201ENST00000364005 LRRC47Q8N1G4 583 aaKnown RBP0.34□□□□□ -2.36
RNU6-340P-201ENST00000364005 PQLC1Q8N2U9 271 aa0.34□□□□□ -2.36
RNU6-340P-201ENST00000364005 ABHD11Q8NFV4 315 aa0.34□□□□□ -2.36
RNU6-340P-201ENST00000364005 RP9Q8TA86 221 aaKnown RBP0.34□□□□□ -2.36
RNU6-340P-201ENST00000364005 ZNF496Q96IT1 587 aaPredicted RBP0.34□□□□□ -2.36
RNU6-340P-201ENST00000364005 DUX5Q96PT3 197 aa0.34□□□□□ -2.36
RNU6-340P-201ENST00000364005 CDC6Q99741 560 aa0.34□□□□□ -2.36
RNU6-340P-201ENST00000364005 MANSC1Q9H8J5 431 aa0.34□□□□□ -2.36
RNU6-340P-201ENST00000364005 PELI2Q9HAT8 420 aa0.34□□□□□ -2.36
RNU6-340P-201ENST00000364005 TOMM22Q9NS69 142 aa0.34□□□□□ -2.36
RNU6-340P-201ENST00000364005 ASIC5Q9NY37 505 aa0.34□□□□□ -2.36
RNU6-340P-201ENST00000364005 FNIP2Q9P278 1114 aa0.34□□□□□ -2.36
RNU6-340P-201ENST00000364005 PPP1R1BQ9UD71 204 aaPredicted RBP0.34□□□□□ -2.36
RNU6-340P-201ENST00000364005 CCNL1Q9UK58 526 aaPredicted RBP0.34□□□□□ -2.36
RNU6-340P-201ENST00000364005 AJAP1Q9UKB5 411 aaPredicted RBP0.34□□□□□ -2.36
RNU6-340P-201ENST00000364005 STRIP2Q9ULQ0 834 aa0.34□□□□□ -2.36
RNU6-340P-201ENST00000364005 PCDHA12Q9UN75 941 aa0.34□□□□□ -2.36
RNU6-340P-201ENST00000364005 RUVBL1Q9Y265 456 aaKnown RBP0.34□□□□□ -2.36
RNU6-340P-201ENST00000364005 MRVI1Q9Y6F6 885 aa0.34□□□□□ -2.36
RNU6-340P-201ENST00000364005 NUMBLQ9Y6R0 609 aa0.34□□□□□ -2.36
RNU6-340P-201ENST00000364005 A0A1W2PPC1 479 aa0.33□□□□□ -2.36
RNU6-340P-201ENST00000364005 RPS10-NUDT3A0A1W2PQS6 291 aa0.33□□□□□ -2.36
RNU6-340P-201ENST00000364005 H0YGN5 161 aa0.33□□□□□ -2.36
RNU6-340P-201ENST00000364005 SLC16A3O15427 465 aaKnown RBP0.33□□□□□ -2.36
RNU6-340P-201ENST00000364005 FESP07332 822 aa0.33□□□□□ -2.36
RNU6-340P-201ENST00000364005 KRTAP1-4P0C5Y4 121 aa0.33□□□□□ -2.36
RNU6-340P-201ENST00000364005 DUX4L4P0CJ87 422 aa0.33□□□□□ -2.36
RNU6-340P-201ENST00000364005 PCSK1P29120 753 aa0.33□□□□□ -2.36
RNU6-340P-201ENST00000364005 ECHS1P30084 290 aa0.33□□□□□ -2.36
RNU6-340P-201ENST00000364005 SLC6A4P31645 630 aa0.33□□□□□ -2.36
RNU6-340P-201ENST00000364005 PXNP49023 591 aaPredicted RBP0.33□□□□□ -2.36
RNU6-340P-201ENST00000364005 PER3P56645 1201 aa0.33□□□□□ -2.36
RNU6-340P-201ENST00000364005 YPEL5P62699 121 aa0.33□□□□□ -2.36
RNU6-340P-201ENST00000364005 PIGFQ07326 219 aa0.33□□□□□ -2.36
RNU6-340P-201ENST00000364005 ARL16Q0P5N6 197 aa0.33□□□□□ -2.36
RNU6-340P-201ENST00000364005 RNASE12Q5GAN4 147 aaKnown RBP0.33□□□□□ -2.36
RNU6-340P-201ENST00000364005 UTP14CQ5TAP6 766 aaKnown RBP0.33□□□□□ -2.36
RNU6-340P-201ENST00000364005 VPS53Q5VIR6 699 aa0.33□□□□□ -2.36
RNU6-340P-201ENST00000364005 TAPT1Q6NXT6 567 aa0.33□□□□□ -2.36
RNU6-340P-201ENST00000364005 SLC30A10Q6XR72 485 aa0.33□□□□□ -2.36
RNU6-340P-201ENST00000364005 Q6ZWC4 215 aa0.33□□□□□ -2.36
RNU6-340P-201ENST00000364005 STXBP4Q6ZWJ1 553 aa0.33□□□□□ -2.36
RNU6-340P-201ENST00000364005 H1FNTQ75WM6 255 aaPredicted RBP0.33□□□□□ -2.36
RNU6-340P-201ENST00000364005 ZNF771Q7L3S4 317 aaPredicted RBP0.33□□□□□ -2.36
RNU6-340P-201ENST00000364005 BCDIN3DQ7Z5W3 292 aaKnown RBP0.33□□□□□ -2.36
RNU6-340P-201ENST00000364005 KRTAP11-1Q8IUC1 163 aa0.33□□□□□ -2.36
RNU6-340P-201ENST00000364005 IL17RCQ8NAC3 791 aa0.33□□□□□ -2.36
RNU6-340P-201ENST00000364005 NLGN4YQ8NFZ3 816 aaPredicted RBP0.33□□□□□ -2.36
RNU6-340P-201ENST00000364005 OR14C36Q8NHC7 312 aa0.33□□□□□ -2.36
RNU6-340P-201ENST00000364005 MAFAQ8NHW3 353 aaPredicted RBP0.33□□□□□ -2.36
RNU6-340P-201ENST00000364005 POC1BQ8TC44 478 aa0.33□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms