RNA–Protein interactions for RNA: ENST00000363858.1

RNU6-271P-201, Transcript of RNA, U6 small nuclear 271, pseudogene, humanhuman

BASIC

Gene RNU6-271P, Length 105 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-271P-201ENST00000363858 PXNP49023 591 aaPredicted RBP2.36□□□□□ -2.03
RNU6-271P-201ENST00000363858 U2AF1Q01081 240 aaKnown RBP eCLIP2.36□□□□□ -2.03
RNU6-271P-201ENST00000363858 NHLH1Q02575 133 aa2.36□□□□□ -2.03
RNU6-271P-201ENST00000363858 FHL3Q13643 280 aa2.36□□□□□ -2.03
RNU6-271P-201ENST00000363858 POLD3Q15054 466 aaPredicted RBP2.36□□□□□ -2.03
RNU6-271P-201ENST00000363858 NPY5RQ15761 445 aa2.36□□□□□ -2.03
RNU6-271P-201ENST00000363858 CNGA2Q16280 664 aa2.36□□□□□ -2.03
RNU6-271P-201ENST00000363858 CYP1B1Q16678 543 aa2.36□□□□□ -2.03
RNU6-271P-201ENST00000363858 PLA1AQ53H76 456 aa2.36□□□□□ -2.03
RNU6-271P-201ENST00000363858 TREML2Q5T2D2 321 aa2.36□□□□□ -2.03
RNU6-271P-201ENST00000363858 TSTD2Q5T7W7 516 aa2.36□□□□□ -2.03
RNU6-271P-201ENST00000363858 ICE2Q659A1 982 aa2.36□□□□□ -2.03
RNU6-271P-201ENST00000363858 LMBRD2Q68DH5 695 aaPredicted RBP2.36□□□□□ -2.03
RNU6-271P-201ENST00000363858 FCRL6Q6DN72 434 aa2.36□□□□□ -2.03
RNU6-271P-201ENST00000363858 DPY19L3Q6ZPD9 716 aa2.36□□□□□ -2.03
RNU6-271P-201ENST00000363858 CCDC149Q6ZUS6 474 aa2.36□□□□□ -2.03
RNU6-271P-201ENST00000363858 AMIGO2Q86SJ2 522 aa2.36□□□□□ -2.03
RNU6-271P-201ENST00000363858 ARHGEF25Q86VW2 580 aa2.36□□□□□ -2.03
RNU6-271P-201ENST00000363858 DGKHQ86XP1 1220 aa2.36□□□□□ -2.03
RNU6-271P-201ENST00000363858 RASAL3Q86YV0 1011 aa2.36□□□□□ -2.03
RNU6-271P-201ENST00000363858 OR6B3Q8NGW1 331 aa2.36□□□□□ -2.03
RNU6-271P-201ENST00000363858 BPIFB1Q8TDL5 484 aa2.36□□□□□ -2.03
RNU6-271P-201ENST00000363858 TMEM171Q8WVE6 324 aa2.36□□□□□ -2.03
RNU6-271P-201ENST00000363858 GLG1Q92896 1179 aa2.36□□□□□ -2.03
RNU6-271P-201ENST00000363858 SARAFQ96BY9 339 aa2.36□□□□□ -2.03
RNU6-271P-201ENST00000363858 R3HDM4Q96D70 268 aa2.36□□□□□ -2.03
RNU6-271P-201ENST00000363858 PUS7Q96PZ0 661 aaKnown RBP2.36□□□□□ -2.03
RNU6-271P-201ENST00000363858 THAP7Q9BT49 309 aaPredicted RBP2.36□□□□□ -2.03
RNU6-271P-201ENST00000363858 MS4A7Q9GZW8 240 aaPredicted RBP2.36□□□□□ -2.03
RNU6-271P-201ENST00000363858 RIOX1Q9H6W3 641 aa2.36□□□□□ -2.03
RNU6-271P-201ENST00000363858 METTL14Q9HCE5 456 aaKnown RBP2.36□□□□□ -2.03
RNU6-271P-201ENST00000363858 SACM1LQ9NTJ5 587 aa2.36□□□□□ -2.03
RNU6-271P-201ENST00000363858 SERTAD4Q9NUC0 356 aa2.36□□□□□ -2.03
RNU6-271P-201ENST00000363858 EHD3Q9NZN3 535 aa2.36□□□□□ -2.03
RNU6-271P-201ENST00000363858 SLC17A6Q9P2U8 582 aa2.36□□□□□ -2.03
RNU6-271P-201ENST00000363858 GABRQQ9UN88 632 aa2.36□□□□□ -2.03
RNU6-271P-201ENST00000363858 A1L4Q6 167 aa2.35□□□□□ -2.03
RNU6-271P-201ENST00000363858 MBD3L4A6NDZ8 208 aaPredicted RBP2.35□□□□□ -2.03
RNU6-271P-201ENST00000363858 MBD3L3A6NE82 208 aaPredicted RBP2.35□□□□□ -2.03
RNU6-271P-201ENST00000363858 ISM1B1AKI9 464 aa2.35□□□□□ -2.03
RNU6-271P-201ENST00000363858 H7C4K7 107 aa2.35□□□□□ -2.03
RNU6-271P-201ENST00000363858 PYCARD-AS1I3L0S3 204 aa2.35□□□□□ -2.03
RNU6-271P-201ENST00000363858 GOLIM4O00461 696 aa2.35□□□□□ -2.03
RNU6-271P-201ENST00000363858 APAF1O14727 1248 aa2.35□□□□□ -2.03
RNU6-271P-201ENST00000363858 FESP07332 822 aa2.35□□□□□ -2.03
RNU6-271P-201ENST00000363858 BRAFP15056 766 aa2.35□□□□□ -2.03
RNU6-271P-201ENST00000363858 ZNF37AP17032 561 aaPredicted RBP2.35□□□□□ -2.03
RNU6-271P-201ENST00000363858 PIK3CBP42338 1070 aa2.35□□□□□ -2.03
RNU6-271P-201ENST00000363858 FAM193AP78312 1265 aa2.35□□□□□ -2.03
RNU6-271P-201ENST00000363858 KIAA0753Q2KHM9 967 aa2.35□□□□□ -2.03
RNU6-271P-201ENST00000363858 DEPDC1Q5TB30 811 aa2.35□□□□□ -2.03
RNU6-271P-201ENST00000363858 ZNF788Q6ZQV5 615 aa2.35□□□□□ -2.03
RNU6-271P-201ENST00000363858 ZNF551Q7Z340 670 aaPredicted RBP2.35□□□□□ -2.03
RNU6-271P-201ENST00000363858 SRGAP1Q7Z6B7 1085 aa2.35□□□□□ -2.03
RNU6-271P-201ENST00000363858 ABRAQ8N0Z2 381 aa2.35□□□□□ -2.03
RNU6-271P-201ENST00000363858 KRT78Q8N1N4 520 aa2.35□□□□□ -2.03
RNU6-271P-201ENST00000363858 RNF152Q8N8N0 203 aa2.35□□□□□ -2.03
RNU6-271P-201ENST00000363858 DNAJB14Q8TBM8 379 aa2.35□□□□□ -2.03
RNU6-271P-201ENST00000363858 CAGE1Q8TC20 777 aa2.35□□□□□ -2.03
RNU6-271P-201ENST00000363858 SOCS4Q8WXH5 440 aa2.35□□□□□ -2.03
RNU6-271P-201ENST00000363858 WDYHV1Q96HA8 205 aa2.35□□□□□ -2.03
RNU6-271P-201ENST00000363858 MSLNLQ96KJ4 702 aa2.35□□□□□ -2.03
RNU6-271P-201ENST00000363858 CRAMP1Q96RY5 1269 aa2.35□□□□□ -2.03
RNU6-271P-201ENST00000363858 ALG8Q9BVK2 526 aa2.35□□□□□ -2.03
RNU6-271P-201ENST00000363858 ZNF518BQ9C0D4 1074 aa2.35□□□□□ -2.03
RNU6-271P-201ENST00000363858 CHST8Q9H2A9 424 aa2.35□□□□□ -2.03
RNU6-271P-201ENST00000363858 FAM204AQ9H8W3 233 aa2.35□□□□□ -2.03
RNU6-271P-201ENST00000363858 GBA2Q9HCG7 927 aaPredicted RBP2.35□□□□□ -2.03
RNU6-271P-201ENST00000363858 KIAA1586Q9HCI6 787 aa2.35□□□□□ -2.03
RNU6-271P-201ENST00000363858 CNNM1Q9NRU3 951 aa2.35□□□□□ -2.03
RNU6-271P-201ENST00000363858 RGS17Q9UGC6 210 aaPredicted RBP2.35□□□□□ -2.03
RNU6-271P-201ENST00000363858 AFF4Q9UHB7 1163 aaKnown RBP2.35□□□□□ -2.03
RNU6-271P-201ENST00000363858 TPCN1Q9ULQ1 816 aa2.35□□□□□ -2.03
RNU6-271P-201ENST00000363858 SHOC2Q9UQ13 582 aa2.35□□□□□ -2.03
RNU6-271P-201ENST00000363858 CDY1Q9Y6F8 540 aa2.35□□□□□ -2.03
RNU6-271P-201ENST00000363858 ARHGEF17Q96PE2 2063 aaPredicted RBP2.35□□□□□ -2.03
RNU6-271P-201ENST00000363858 FER1L4A9Z1Z3 1794 aa2.34□□□□□ -2.03
RNU6-271P-201ENST00000363858 MASP2O00187 686 aa2.34□□□□□ -2.03
RNU6-271P-201ENST00000363858 SLC16A3O15427 465 aaKnown RBP2.34□□□□□ -2.03
RNU6-271P-201ENST00000363858 RRP9O43818 475 aaKnown RBP2.34□□□□□ -2.03
RNU6-271P-201ENST00000363858 TBC1D4O60343 1298 aa2.34□□□□□ -2.03
RNU6-271P-201ENST00000363858 TJP3O95049 919 aa2.34□□□□□ -2.03
RNU6-271P-201ENST00000363858 EBLN1P0CF75 366 aa2.34□□□□□ -2.03
RNU6-271P-201ENST00000363858 TXNP10599 105 aaKnown RBP2.34□□□□□ -2.03
RNU6-271P-201ENST00000363858 CYP2C9P11712 490 aa2.34□□□□□ -2.03
RNU6-271P-201ENST00000363858 TSHRP16473 764 aa2.34□□□□□ -2.03
RNU6-271P-201ENST00000363858 FPR3P25089 353 aa2.34□□□□□ -2.03
RNU6-271P-201ENST00000363858 KLRC1P26715 233 aa2.34□□□□□ -2.03
RNU6-271P-201ENST00000363858 LRPAP1P30533 357 aa2.34□□□□□ -2.03
RNU6-271P-201ENST00000363858 PDE6CP51160 858 aa2.34□□□□□ -2.03
RNU6-271P-201ENST00000363858 CYP4F2P78329 520 aa2.34□□□□□ -2.03
RNU6-271P-201ENST00000363858 PSG6Q00889 435 aa2.34□□□□□ -2.03
RNU6-271P-201ENST00000363858 TIAL1Q01085 375 aaKnown RBP eCLIP2.34□□□□□ -2.03
RNU6-271P-201ENST00000363858 FOXF2Q12947 444 aa2.34□□□□□ -2.03
RNU6-271P-201ENST00000363858 BMPR2Q13873 1038 aa2.34□□□□□ -2.03
RNU6-271P-201ENST00000363858 E2F2Q14209 437 aa2.34□□□□□ -2.03
RNU6-271P-201ENST00000363858 AMOTQ4VCS5 1084 aa2.34□□□□□ -2.03
RNU6-271P-201ENST00000363858 ZNF618Q5T7W0 954 aa2.34□□□□□ -2.03
RNU6-271P-201ENST00000363858 STRIP1Q5VSL9 837 aa2.34□□□□□ -2.03
RNU6-271P-201ENST00000363858 SLC9A4Q6AI14 798 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms