RNA–Protein interactions for RNA: ENST00000361575.3

RPL39-201, Transcript of ribosomal protein L39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL39, Length 401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-201ENST00000361575 IDEP14735 1019 aa5.74□□□□□ -1.49
RPL39-201ENST00000361575 TNFAIP3P21580 790 aa5.74□□□□□ -1.49
RPL39-201ENST00000361575 BDNFP23560 247 aa5.74□□□□□ -1.49
RPL39-201ENST00000361575 CNTFP26441 200 aa5.74□□□□□ -1.49
RPL39-201ENST00000361575 KLRK1P26718 216 aa5.74□□□□□ -1.49
RPL39-201ENST00000361575 SLC5A2P31639 672 aa5.74□□□□□ -1.49
RPL39-201ENST00000361575 APOBEC3AP31941 199 aaPredicted RBP5.74□□□□□ -1.49
RPL39-201ENST00000361575 ADD2P35612 726 aa5.74□□□□□ -1.49
RPL39-201ENST00000361575 SEC24CP53992 1094 aa5.74□□□□□ -1.49
RPL39-201ENST00000361575 OCA2Q04671 838 aa5.74□□□□□ -1.49
RPL39-201ENST00000361575 NSUN2Q08J23 767 aaKnown RBP eCLIP5.74□□□□□ -1.49
RPL39-201ENST00000361575 FAM110CQ1W6H9 321 aa5.74□□□□□ -1.49
RPL39-201ENST00000361575 TRIM71Q2Q1W2 868 aaKnown RBP5.74□□□□□ -1.49
RPL39-201ENST00000361575 MGAT5BQ3V5L5 792 aa5.74□□□□□ -1.49
RPL39-201ENST00000361575 INTS11Q5TA45 600 aaKnown RBP5.74□□□□□ -1.49
RPL39-201ENST00000361575 CACHD1Q5VU97 1274 aa5.74□□□□□ -1.49
RPL39-201ENST00000361575 TSHZ3Q63HK5 1081 aa5.74□□□□□ -1.49
RPL39-201ENST00000361575 NAIF1Q69YI7 327 aaPredicted RBP5.74□□□□□ -1.49
RPL39-201ENST00000361575 ABLIM2Q6H8Q1 611 aa5.74□□□□□ -1.49
RPL39-201ENST00000361575 LRRTM4Q86VH4 590 aa5.74□□□□□ -1.49
RPL39-201ENST00000361575 GATAD2AQ86YP4 633 aa5.74□□□□□ -1.49
RPL39-201ENST00000361575 OR56A1Q8NGH5 318 aa5.74□□□□□ -1.49
RPL39-201ENST00000361575 HERVK_113Q902F9 699 aa5.74□□□□□ -1.49
RPL39-201ENST00000361575 FAM227BQ96M60 508 aa5.74□□□□□ -1.49
RPL39-201ENST00000361575 PNKPQ96T60 521 aa5.74□□□□□ -1.49
RPL39-201ENST00000361575 FAM83DQ9H4H8 585 aa5.74□□□□□ -1.49
RPL39-201ENST00000361575 ZBTB26Q9HCK0 441 aa5.74□□□□□ -1.49
RPL39-201ENST00000361575 FSCN3Q9NQT6 498 aa5.74□□□□□ -1.49
RPL39-201ENST00000361575 HERC5Q9UII4 1024 aaKnown RBP5.74□□□□□ -1.49
RPL39-201ENST00000361575 SHOC2Q9UQ13 582 aa5.74□□□□□ -1.49
RPL39-201ENST00000361575 CHST2Q9Y4C5 530 aa5.74□□□□□ -1.49
RPL39-201ENST00000361575 RAD54BQ9Y620 910 aa5.74□□□□□ -1.49
RPL39-201ENST00000361575 SETD1BQ9UPS6 1966 aaKnown RBP5.74□□□□□ -1.49
RPL39-201ENST00000361575 A0A1B0GTW7 788 aa5.73□□□□□ -1.49
RPL39-201ENST00000361575 AQP7P3A6NL99 342 aa5.73□□□□□ -1.49
RPL39-201ENST00000361575 ADM5C9JUS6 153 aa5.73□□□□□ -1.49
RPL39-201ENST00000361575 AGPSO00116 658 aa5.73□□□□□ -1.49
RPL39-201ENST00000361575 ACTL6BO94805 426 aa5.73□□□□□ -1.49
RPL39-201ENST00000361575 GLP2RO95838 553 aa5.73□□□□□ -1.49
RPL39-201ENST00000361575 SPATA31D3P0C874 917 aa5.73□□□□□ -1.49
RPL39-201ENST00000361575 FGFR4P22455 802 aa5.73□□□□□ -1.49
RPL39-201ENST00000361575 RAP1GAPP47736 663 aa5.73□□□□□ -1.49
RPL39-201ENST00000361575 PXNP49023 591 aaPredicted RBP5.73□□□□□ -1.49
RPL39-201ENST00000361575 GEMIN4P57678 1058 aaKnown RBP5.73□□□□□ -1.49
RPL39-201ENST00000361575 JAG1P78504 1218 aa5.73□□□□□ -1.49
RPL39-201ENST00000361575 HSD11B2P80365 405 aa5.73□□□□□ -1.49
RPL39-201ENST00000361575 KRT17Q04695 432 aa5.73□□□□□ -1.49
RPL39-201ENST00000361575 ZNF844Q08AG5 666 aa5.73□□□□□ -1.49
RPL39-201ENST00000361575 TBX2Q13207 712 aaPredicted RBP5.73□□□□□ -1.49
RPL39-201ENST00000361575 CUL4BQ13620 913 aa5.73□□□□□ -1.49
RPL39-201ENST00000361575 TMEM108Q6UXF1 575 aa5.73□□□□□ -1.49
RPL39-201ENST00000361575 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.73□□□□□ -1.49
RPL39-201ENST00000361575 Q6ZRM9 215 aa5.73□□□□□ -1.49
RPL39-201ENST00000361575 SPATA31D4Q6ZUB0 917 aa5.73□□□□□ -1.49
RPL39-201ENST00000361575 SLC44A2Q8IWA5 706 aaPredicted RBP5.73□□□□□ -1.49
RPL39-201ENST00000361575 FTSJ3Q8IY81 847 aaKnown RBP5.73□□□□□ -1.49
RPL39-201ENST00000361575 D2HGDHQ8N465 521 aa5.73□□□□□ -1.49
RPL39-201ENST00000361575 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.73□□□□□ -1.499e-10■□□□□ 10.6
RPL39-201ENST00000361575 NAXEQ8NCW5 288 aa5.73□□□□□ -1.49
RPL39-201ENST00000361575 DNAJB14Q8TBM8 379 aa5.73□□□□□ -1.49
RPL39-201ENST00000361575 MIEF2Q96C03 454 aa5.73□□□□□ -1.49
RPL39-201ENST00000361575 TRIM5Q9C035 493 aa5.73□□□□□ -1.49
RPL39-201ENST00000361575 SLC25A32Q9H2D1 315 aa5.73□□□□□ -1.49
RPL39-201ENST00000361575 EPS8L2Q9H6S3 715 aa5.73□□□□□ -1.49
RPL39-201ENST00000361575 IFT80Q9P2H3 777 aaPredicted RBP5.73□□□□□ -1.49
RPL39-201ENST00000361575 NDRG4Q9ULP0 352 aaKnown RBP5.73□□□□□ -1.49
RPL39-201ENST00000361575 CA14Q9ULX7 337 aa5.73□□□□□ -1.49
RPL39-201ENST00000361575 USP15Q9Y4E8 981 aaPredicted RBP5.73□□□□□ -1.49
RPL39-201ENST00000361575 KAT6BQ8WYB5 2073 aa5.73□□□□□ -1.49
RPL39-201ENST00000361575 GRXCR1A8MXD5 290 aa5.72□□□□□ -1.49
RPL39-201ENST00000361575 CD3EAPO15446 510 aaKnown RBP5.72□□□□□ -1.49
RPL39-201ENST00000361575 GPR42O15529 346 aa5.72□□□□□ -1.49
RPL39-201ENST00000361575 SRGAP2O75044 1071 aa5.72□□□□□ -1.49
RPL39-201ENST00000361575 RASAL1O95294 804 aa5.72□□□□□ -1.49
RPL39-201ENST00000361575 ANXA6P08133 673 aa5.72□□□□□ -1.49
RPL39-201ENST00000361575 HGFP14210 728 aa5.72□□□□□ -1.49
RPL39-201ENST00000361575 KCNA2P16389 499 aa5.72□□□□□ -1.49
RPL39-201ENST00000361575 LRPAP1P30533 357 aa5.72□□□□□ -1.49
RPL39-201ENST00000361575 ATP1A4Q13733 1029 aa5.72□□□□□ -1.49
RPL39-201ENST00000361575 GRM4Q14833 912 aa5.72□□□□□ -1.49
RPL39-201ENST00000361575 PDCD4Q53EL6 469 aaKnown RBP5.72□□□□□ -1.49
RPL39-201ENST00000361575 KLHL17Q6TDP4 642 aa5.72□□□□□ -1.49
RPL39-201ENST00000361575 Q6ZSN1 163 aa5.72□□□□□ -1.49
RPL39-201ENST00000361575 PCGF5Q86SE9 256 aa5.72□□□□□ -1.49
RPL39-201ENST00000361575 NME8Q8N427 588 aa5.72□□□□□ -1.49
RPL39-201ENST00000361575 POU5F2Q8N7G0 328 aa5.72□□□□□ -1.49
RPL39-201ENST00000361575 CPT1CQ8TCG5 803 aa5.72□□□□□ -1.49
RPL39-201ENST00000361575 PPP2R3CQ969Q6 453 aa5.72□□□□□ -1.49
RPL39-201ENST00000361575 SLC38A3Q99624 504 aa5.72□□□□□ -1.49
RPL39-201ENST00000361575 GPR20Q99678 358 aa5.72□□□□□ -1.49
RPL39-201ENST00000361575 RTKNQ9BST9 563 aa5.72□□□□□ -1.49
RPL39-201ENST00000361575 GBA2Q9HCG7 927 aaPredicted RBP5.72□□□□□ -1.49
RPL39-201ENST00000361575 ZSCAN32Q9NX65 697 aa5.72□□□□□ -1.49
RPL39-201ENST00000361575 KIF17Q9P2E2 1029 aa5.72□□□□□ -1.49
RPL39-201ENST00000361575 DAPP1Q9UN19 280 aa5.72□□□□□ -1.49
RPL39-201ENST00000361575 ZFR2Q9UPR6 939 aaKnown RBP5.72□□□□□ -1.49
RPL39-201ENST00000361575 SSX2IPQ9Y2D8 614 aa5.72□□□□□ -1.49
RPL39-201ENST00000361575 FAM90A18PA6NE21 464 aa5.71□□□□□ -1.5
RPL39-201ENST00000361575 FAM90A16PA6NEW6 464 aa5.71□□□□□ -1.5
RPL39-201ENST00000361575 HMX3A6NHT5 357 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms