RNA–Protein interactions for RNA: ENST00000360495.9

CCDC144A-203, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,545 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-203ENST00000360495 HMG20AQ9NP66 347 aa13.91□□□□□ -0.18
CCDC144A-203ENST00000360495 BSDC1Q9NW68 430 aaPredicted RBP13.91□□□□□ -0.18
CCDC144A-203ENST00000360495 FAM25AB3EWG3 89 aa13.9□□□□□ -0.18
CCDC144A-203ENST00000360495 FAM25CB3EWG5 89 aa13.9□□□□□ -0.18
CCDC144A-203ENST00000360495 FAM25GB3EWG6 89 aa13.9□□□□□ -0.18
CCDC144A-203ENST00000360495 EEF2KO00418 725 aaKnown RBP13.9□□□□□ -0.18
CCDC144A-203ENST00000360495 FCHO1O14526 889 aa13.9□□□□□ -0.18
CCDC144A-203ENST00000360495 PEX1O43933 1283 aa13.9□□□□□ -0.18
CCDC144A-203ENST00000360495 PGK2P07205 417 aa13.9□□□□□ -0.18
CCDC144A-203ENST00000360495 FASP25445 335 aa13.9□□□□□ -0.18
CCDC144A-203ENST00000360495 PPP3CCP48454 512 aa13.9□□□□□ -0.18
CCDC144A-203ENST00000360495 SLC16A1P53985 500 aa13.9□□□□□ -0.18
CCDC144A-203ENST00000360495 NME5P56597 212 aa13.9□□□□□ -0.18
CCDC144A-203ENST00000360495 SNX31Q8N9S9 440 aa13.9□□□□□ -0.18
CCDC144A-203ENST00000360495 KYQ8NBH2 561 aa13.9□□□□□ -0.18
CCDC144A-203ENST00000360495 ENKURQ8TC29 256 aa13.9□□□□□ -0.18
CCDC144A-203ENST00000360495 HDHD2Q9H0R4 259 aa13.9□□□□□ -0.18
CCDC144A-203ENST00000360495 KRT84Q9NSB2 600 aa13.9□□□□□ -0.18
CCDC144A-203ENST00000360495 MEI4A8MW99 385 aa13.9□□□□□ -0.18
CCDC144A-203ENST00000360495 SUPT7LO94864 414 aa13.9□□□□□ -0.18
CCDC144A-203ENST00000360495 LCA5LO95447 670 aa13.9□□□□□ -0.18
CCDC144A-203ENST00000360495 PTGER2P43116 358 aa13.9□□□□□ -0.18
CCDC144A-203ENST00000360495 POU4F1Q01851 419 aa13.9□□□□□ -0.18
CCDC144A-203ENST00000360495 COX10Q12887 443 aa13.9□□□□□ -0.18
CCDC144A-203ENST00000360495 FAM180AQ6UWF9 173 aa13.9□□□□□ -0.18
CCDC144A-203ENST00000360495 SLC10A4Q96EP9 437 aa13.9□□□□□ -0.18
CCDC144A-203ENST00000360495 DCUN1D1Q96GG9 259 aa13.9□□□□□ -0.18
CCDC144A-203ENST00000360495 TRIM62Q9BVG3 475 aa13.9□□□□□ -0.18
CCDC144A-203ENST00000360495 LACRTQ9GZZ8 138 aa13.9□□□□□ -0.18
CCDC144A-203ENST00000360495 TUBGCP4Q9UGJ1 667 aa13.9□□□□□ -0.18
CCDC144A-203ENST00000360495 GTF3C4Q9UKN8 822 aa13.9□□□□□ -0.18
CCDC144A-203ENST00000360495 SNTNA6NMZ2 147 aa13.9□□□□□ -0.18
CCDC144A-203ENST00000360495 PTK6Q13882 451 aa13.9□□□□□ -0.18
CCDC144A-203ENST00000360495 PCSK7Q16549 785 aa13.9□□□□□ -0.18
CCDC144A-203ENST00000360495 RGS21Q2M5E4 152 aa13.9□□□□□ -0.18
CCDC144A-203ENST00000360495 FAXCQ5TGI0 409 aa13.9□□□□□ -0.18
CCDC144A-203ENST00000360495 KIF12Q96FN5 646 aa13.9□□□□□ -0.18
CCDC144A-203ENST00000360495 OLFM1Q99784 485 aa13.9□□□□□ -0.18
CCDC144A-203ENST00000360495 RNPEPL1Q9HAU8 725 aa13.9□□□□□ -0.18
CCDC144A-203ENST00000360495 ABCA5Q8WWZ7 1642 aa13.9□□□□□ -0.18
CCDC144A-203ENST00000360495 HEATR9A2RTY3 570 aa13.9□□□□□ -0.18
CCDC144A-203ENST00000360495 KIAA0391O15091 583 aaKnown RBP13.9□□□□□ -0.18
CCDC144A-203ENST00000360495 MAP3K13O43283 966 aa13.9□□□□□ -0.18
CCDC144A-203ENST00000360495 CBX6O95503 412 aa13.9□□□□□ -0.18
CCDC144A-203ENST00000360495 OR6Y1Q8NGX8 325 aa13.9□□□□□ -0.18
CCDC144A-203ENST00000360495 NR5A2O00482 541 aa13.89□□□□□ -0.19
CCDC144A-203ENST00000360495 TNPO2O14787 897 aaKnown RBP13.89□□□□□ -0.19
CCDC144A-203ENST00000360495 TNFRSF21O75509 655 aa13.89□□□□□ -0.19
CCDC144A-203ENST00000360495 NCOA4Q13772 614 aa13.89□□□□□ -0.19
CCDC144A-203ENST00000360495 MTFR1Q15390 333 aa13.89□□□□□ -0.19
CCDC144A-203ENST00000360495 TWF2Q6IBS0 349 aaKnown RBP13.89□□□□□ -0.19
CCDC144A-203ENST00000360495 TMED8Q6PL24 325 aaPredicted RBP13.89□□□□□ -0.19
CCDC144A-203ENST00000360495 OTOAQ7RTW8 1153 aa13.89□□□□□ -0.19
CCDC144A-203ENST00000360495 RTL3Q8N8U3 475 aaKnown RBP13.89□□□□□ -0.19
CCDC144A-203ENST00000360495 IPMKQ8NFU5 416 aa13.89□□□□□ -0.19
CCDC144A-203ENST00000360495 ACSF2Q96CM8 615 aaPredicted RBP13.89□□□□□ -0.19
CCDC144A-203ENST00000360495 RAVER2Q9HCJ3 691 aaKnown RBP13.89□□□□□ -0.19
CCDC144A-203ENST00000360495 SLC24A2Q9UI40 661 aa13.89□□□□□ -0.19
CCDC144A-203ENST00000360495 NAALADL1Q9UQQ1 740 aa13.89□□□□□ -0.19
CCDC144A-203ENST00000360495 ERVV-1B6SEH8 477 aa13.89□□□□□ -0.19
CCDC144A-203ENST00000360495 AP5Z1O43299 807 aa13.89□□□□□ -0.19
CCDC144A-203ENST00000360495 GRAP2O75791 330 aa13.89□□□□□ -0.19
CCDC144A-203ENST00000360495 BBOX1O75936 387 aa13.89□□□□□ -0.19
CCDC144A-203ENST00000360495 CNKSR1Q969H4 720 aa13.89□□□□□ -0.19
CCDC144A-203ENST00000360495 SEMA4AQ9H3S1 761 aa13.89□□□□□ -0.19
CCDC144A-203ENST00000360495 A0A087WXM4 84 aa13.89□□□□□ -0.19
CCDC144A-203ENST00000360495 FAM20BO75063 409 aa13.89□□□□□ -0.19
CCDC144A-203ENST00000360495 CSPG5O95196 566 aa13.89□□□□□ -0.19
CCDC144A-203ENST00000360495 PSMG1O95456 288 aa13.89□□□□□ -0.19
CCDC144A-203ENST00000360495 AVPR1AP37288 418 aa13.89□□□□□ -0.19
CCDC144A-203ENST00000360495 ZNF844Q08AG5 666 aa13.89□□□□□ -0.19
CCDC144A-203ENST00000360495 XRCC4Q13426 336 aa13.89□□□□□ -0.19
CCDC144A-203ENST00000360495 C11orf88Q6PI97 169 aa13.89□□□□□ -0.19
CCDC144A-203ENST00000360495 SYTL1Q8IYJ3 562 aa13.89□□□□□ -0.19
CCDC144A-203ENST00000360495 SH3TC2Q8TF17 1288 aa13.89□□□□□ -0.19
CCDC144A-203ENST00000360495 EHD4Q9H223 541 aa13.89□□□□□ -0.19
CCDC144A-203ENST00000360495 CNOT7Q9UIV1 285 aaKnown RBP13.89□□□□□ -0.19
CCDC144A-203ENST00000360495 PNMA8CA0A1B0GUJ8 204 aa13.89□□□□□ -0.19
CCDC144A-203ENST00000360495 PARNO95453 639 aaKnown RBP13.89□□□□□ -0.19
CCDC144A-203ENST00000360495 S100A9P06702 114 aaKnown RBP13.89□□□□□ -0.19
CCDC144A-203ENST00000360495 YWHABP31946 246 aaKnown RBP13.89□□□□□ -0.19
CCDC144A-203ENST00000360495 ACOT2P49753 483 aa13.89□□□□□ -0.19
CCDC144A-203ENST00000360495 STILQ15468 1287 aa13.89□□□□□ -0.19
CCDC144A-203ENST00000360495 CNGA2Q16280 664 aa13.89□□□□□ -0.19
CCDC144A-203ENST00000360495 SVOPQ8N4V2 548 aa13.89□□□□□ -0.19
CCDC144A-203ENST00000360495 DCPSQ96C86 337 aaKnown RBP13.89□□□□□ -0.19
CCDC144A-203ENST00000360495 OXNAD1Q96HP4 312 aaPredicted RBP13.89□□□□□ -0.19
CCDC144A-203ENST00000360495 TNIP3Q96KP6 325 aa13.89□□□□□ -0.19
CCDC144A-203ENST00000360495 ZFP42Q96MM3 310 aa13.89□□□□□ -0.19
CCDC144A-203ENST00000360495 PACSIN1Q9BY11 444 aa13.89□□□□□ -0.19
CCDC144A-203ENST00000360495 TRIM39Q9HCM9 518 aa13.89□□□□□ -0.19
CCDC144A-203ENST00000360495 MBD2Q9UBB5 411 aa13.89□□□□□ -0.19
CCDC144A-203ENST00000360495 EIF3LQ9Y262 564 aaKnown RBP13.89□□□□□ -0.19
CCDC144A-203ENST00000360495 ATP10AO60312 1499 aa13.89□□□□□ -0.19
CCDC144A-203ENST00000360495 HEG1Q9ULI3 1381 aa13.89□□□□□ -0.19
CCDC144A-203ENST00000360495 TRAPPC3O43617 180 aa13.89□□□□□ -0.19
CCDC144A-203ENST00000360495 KLHL18O94889 574 aa13.89□□□□□ -0.19
CCDC144A-203ENST00000360495 PIK3R1P27986 724 aa13.89□□□□□ -0.19
CCDC144A-203ENST00000360495 STIP1P31948 543 aaKnown RBP13.89□□□□□ -0.19
CCDC144A-203ENST00000360495 SFSWAPQ12872 951 aaKnown RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms