RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 ATG16L2Q8NAA4 619 aa9.63□□□□□ -0.87
VPS13A-203ENST00000360280 SLC9A7Q96T83 725 aa9.63□□□□□ -0.87
VPS13A-203ENST00000360280 FBXO28Q9NVF7 368 aa9.63□□□□□ -0.87
VPS13A-203ENST00000360280 ATP7BP35670 1465 aa9.63□□□□□ -0.87
VPS13A-203ENST00000360280 C2orf81A6NN90 581 aa9.63□□□□□ -0.87
VPS13A-203ENST00000360280 PTPN7P35236 360 aa9.63□□□□□ -0.87
VPS13A-203ENST00000360280 CCDC144BQ3MJ40 725 aa9.63□□□□□ -0.87
VPS13A-203ENST00000360280 ARID3BQ8IVW6 561 aaPredicted RBP9.63□□□□□ -0.87
VPS13A-203ENST00000360280 RCVRNP35243 200 aa9.63□□□□□ -0.87
VPS13A-203ENST00000360280 PDK1Q15118 436 aa9.63□□□□□ -0.87
VPS13A-203ENST00000360280 SGO1Q5FBB7 561 aa9.63□□□□□ -0.87
VPS13A-203ENST00000360280 SPATA2LQ8IUW3 424 aaPredicted RBP9.63□□□□□ -0.87
VPS13A-203ENST00000360280 PABPC1P11940 636 aaKnown RBP9.63□□□□□ -0.87
VPS13A-203ENST00000360280 TGM2P21980 687 aa9.63□□□□□ -0.87
VPS13A-203ENST00000360280 EFNA5P52803 228 aa9.63□□□□□ -0.87
VPS13A-203ENST00000360280 LAYNQ6UX15 382 aa9.63□□□□□ -0.87
VPS13A-203ENST00000360280 LRRC6Q86X45 466 aa9.63□□□□□ -0.87
VPS13A-203ENST00000360280 WDR24Q96S15 920 aa9.63□□□□□ -0.87
VPS13A-203ENST00000360280 ETAA1Q9NY74 926 aa9.63□□□□□ -0.87
VPS13A-203ENST00000360280 BTBD3Q9Y2F9 522 aa9.63□□□□□ -0.87
VPS13A-203ENST00000360280 LCA5LO95447 670 aa9.63□□□□□ -0.87
VPS13A-203ENST00000360280 RPN2P04844 631 aa9.63□□□□□ -0.87
VPS13A-203ENST00000360280 MAGEA4P43358 317 aa9.63□□□□□ -0.87
VPS13A-203ENST00000360280 DKK3Q9UBP4 350 aa9.63□□□□□ -0.87
VPS13A-203ENST00000360280 AGO2Q9UKV8 859 aaKnown RBP9.63□□□□□ -0.87
VPS13A-203ENST00000360280 MYL12BO14950 172 aa9.62□□□□□ -0.87
VPS13A-203ENST00000360280 CASP4P49662 377 aa9.62□□□□□ -0.87
VPS13A-203ENST00000360280 ZNF677Q86XU0 584 aa9.62□□□□□ -0.87
VPS13A-203ENST00000360280 FMR1NBQ8N0W7 255 aaPredicted RBP9.62□□□□□ -0.87
VPS13A-203ENST00000360280 CD248Q9HCU0 757 aa9.62□□□□□ -0.87
VPS13A-203ENST00000360280 MYRFQ9Y2G1 1151 aa9.62□□□□□ -0.87
VPS13A-203ENST00000360280 RNF123Q5XPI4 1314 aa9.62□□□□□ -0.87
VPS13A-203ENST00000360280 GTF2E2P29084 291 aaKnown RBP9.62□□□□□ -0.87
VPS13A-203ENST00000360280 IZUMO2Q6UXV1 221 aa9.62□□□□□ -0.87
VPS13A-203ENST00000360280 ADI1Q9BV57 179 aa9.62□□□□□ -0.87
VPS13A-203ENST00000360280 TRPM5Q9NZQ8 1165 aa9.62□□□□□ -0.87
VPS13A-203ENST00000360280 ZSWIM5Q9P217 1185 aa9.62□□□□□ -0.87
VPS13A-203ENST00000360280 EFCAB10A6NFE3 127 aa9.62□□□□□ -0.87
VPS13A-203ENST00000360280 TPST1O60507 370 aa9.62□□□□□ -0.87
VPS13A-203ENST00000360280 PSMD4P55036 377 aaKnown RBP9.62□□□□□ -0.87
VPS13A-203ENST00000360280 SLC7A14Q8TBB6 771 aa9.62□□□□□ -0.87
VPS13A-203ENST00000360280 TFB1MQ8WVM0 346 aaKnown RBP9.62□□□□□ -0.87
VPS13A-203ENST00000360280 LBHD1Q9BQE6 289 aaPredicted RBP9.62□□□□□ -0.87
VPS13A-203ENST00000360280 ERP44Q9BS26 406 aa9.62□□□□□ -0.87
VPS13A-203ENST00000360280 ZNF341Q9BYN7 854 aa9.62□□□□□ -0.87
VPS13A-203ENST00000360280 BCS1LQ9Y276 419 aa9.62□□□□□ -0.87
VPS13A-203ENST00000360280 CDK12Q9NYV4 1490 aaPredicted RBP9.62□□□□□ -0.87
VPS13A-203ENST00000360280 NFICP08651 508 aa9.62□□□□□ -0.87
VPS13A-203ENST00000360280 DNAJC10Q8IXB1 793 aa9.62□□□□□ -0.87
VPS13A-203ENST00000360280 AGAP3Q96P47 875 aa9.62□□□□□ -0.87
VPS13A-203ENST00000360280 PDXKO00764 312 aa9.62□□□□□ -0.87
VPS13A-203ENST00000360280 MAPK11Q15759 364 aa9.62□□□□□ -0.87
VPS13A-203ENST00000360280 ERAP2Q6P179 960 aa9.62□□□□□ -0.87
VPS13A-203ENST00000360280 MMADHCQ9H3L0 296 aaPredicted RBP9.62□□□□□ -0.87
VPS13A-203ENST00000360280 MIEF1Q9NQG6 463 aa9.62□□□□□ -0.87
VPS13A-203ENST00000360280 POLG2Q9UHN1 485 aa9.62□□□□□ -0.87
VPS13A-203ENST00000360280 SLCO1B7G3V0H7 640 aa9.62□□□□□ -0.87
VPS13A-203ENST00000360280 ZNF185O15231 689 aa9.62□□□□□ -0.87
VPS13A-203ENST00000360280 SSNA1O43805 119 aa9.62□□□□□ -0.87
VPS13A-203ENST00000360280 GDF11O95390 407 aa9.62□□□□□ -0.87
VPS13A-203ENST00000360280 POTEIP0CG38 1075 aa9.62□□□□□ -0.87
VPS13A-203ENST00000360280 ULK2Q8IYT8 1036 aa9.62□□□□□ -0.87
VPS13A-203ENST00000360280 SLC20A1Q8WUM9 679 aa9.62□□□□□ -0.87
VPS13A-203ENST00000360280 PHTF1Q9UMS5 762 aa9.62□□□□□ -0.87
VPS13A-203ENST00000360280 MAP2P11137 1827 aaKnown RBP9.62□□□□□ -0.87
VPS13A-203ENST00000360280 SLC26A4O43511 780 aa9.62□□□□□ -0.87
VPS13A-203ENST00000360280 TTKP33981 857 aa9.62□□□□□ -0.87
VPS13A-203ENST00000360280 POTEGQ6S5H5 508 aa9.62□□□□□ -0.87
VPS13A-203ENST00000360280 BTN2A1Q7KYR7 527 aa9.62□□□□□ -0.87
VPS13A-203ENST00000360280 RTKN2Q8IZC4 609 aa9.62□□□□□ -0.87
VPS13A-203ENST00000360280 ROGDIQ9GZN7 287 aa9.62□□□□□ -0.87
VPS13A-203ENST00000360280 GREM2Q9H772 168 aa9.62□□□□□ -0.87
VPS13A-203ENST00000360280 HOXC10Q9NYD6 342 aa9.62□□□□□ -0.87
VPS13A-203ENST00000360280 TAGLN3Q9UI15 199 aa9.62□□□□□ -0.87
VPS13A-203ENST00000360280 UBE2QL1A1L167 161 aa9.62□□□□□ -0.87
VPS13A-203ENST00000360280 PSMD14O00487 310 aa9.62□□□□□ -0.87
VPS13A-203ENST00000360280 AKR1B1P15121 316 aa9.62□□□□□ -0.87
VPS13A-203ENST00000360280 YWHAQP27348 245 aa9.62□□□□□ -0.87
VPS13A-203ENST00000360280 NAIF1Q69YI7 327 aaPredicted RBP9.62□□□□□ -0.87
VPS13A-203ENST00000360280 CCNJLQ8IV13 435 aa9.62□□□□□ -0.87
VPS13A-203ENST00000360280 HNRNPLLQ8WVV9 542 aaKnown RBP9.62□□□□□ -0.87
VPS13A-203ENST00000360280 GPR63Q9BZJ6 419 aa9.62□□□□□ -0.87
VPS13A-203ENST00000360280 COPS7BQ9H9Q2 264 aaPredicted RBP9.62□□□□□ -0.87
VPS13A-203ENST00000360280 GLRA3O75311 464 aa9.62□□□□□ -0.87
VPS13A-203ENST00000360280 CDK8P49336 464 aa9.62□□□□□ -0.87
VPS13A-203ENST00000360280 VN1R5Q7Z5H4 357 aa9.62□□□□□ -0.87
VPS13A-203ENST00000360280 BAZ2BQ9UIF8 2168 aaKnown RBP9.62□□□□□ -0.87
VPS13A-203ENST00000360280 TNFRSF21O75509 655 aa9.62□□□□□ -0.87
VPS13A-203ENST00000360280 FAM217BQ9NTX9 383 aaPredicted RBP9.62□□□□□ -0.87
VPS13A-203ENST00000360280 FEM1BQ9UK73 627 aa9.62□□□□□ -0.87
VPS13A-203ENST00000360280 SLC39A10Q9ULF5 831 aa9.62□□□□□ -0.87
VPS13A-203ENST00000360280 DYNC1LI2O43237 492 aaPredicted RBP9.62□□□□□ -0.87
VPS13A-203ENST00000360280 SFSWAPQ12872 951 aaKnown RBP9.62□□□□□ -0.87
VPS13A-203ENST00000360280 DNAJC3Q13217 504 aa9.62□□□□□ -0.87
VPS13A-203ENST00000360280 MAD2L1Q13257 205 aaPredicted RBP9.62□□□□□ -0.87
VPS13A-203ENST00000360280 ITGB3BPQ13352 177 aaPredicted RBP9.62□□□□□ -0.87
VPS13A-203ENST00000360280 RASA2Q15283 850 aa9.62□□□□□ -0.87
VPS13A-203ENST00000360280 ESRP1Q6NXG1 681 aaKnown RBP9.62□□□□□ -0.87
VPS13A-203ENST00000360280 POLR1BQ9H9Y6 1135 aa9.62□□□□□ -0.87
VPS13A-203ENST00000360280 RXFP1Q9HBX9 757 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms