RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 SLC20A1Q8WUM9 679 aa13.15□□□□□ -0.3
NIF3L1-201ENST00000359683 PGLYRP2Q96PD5 576 aa13.15□□□□□ -0.3
NIF3L1-201ENST00000359683 AGPAT1Q99943 283 aa13.15□□□□□ -0.3
NIF3L1-201ENST00000359683 ZNF518BQ9C0D4 1074 aa13.15□□□□□ -0.3
NIF3L1-201ENST00000359683 TSPAN16Q9UKR8 245 aa13.15□□□□□ -0.3
NIF3L1-201ENST00000359683 TCF20Q9UGU0 1960 aaKnown RBP13.14□□□□□ -0.31
NIF3L1-201ENST00000359683 TGM5O43548 720 aa13.14□□□□□ -0.31
NIF3L1-201ENST00000359683 CLASP2O75122 1294 aaKnown RBP13.14□□□□□ -0.31
NIF3L1-201ENST00000359683 MICAL2O94851 1124 aa13.14□□□□□ -0.31
NIF3L1-201ENST00000359683 MMEP08473 750 aa13.14□□□□□ -0.31
NIF3L1-201ENST00000359683 PLEKP08567 350 aaPredicted RBP13.14□□□□□ -0.31
NIF3L1-201ENST00000359683 CFHP08603 1231 aa13.14□□□□□ -0.31
NIF3L1-201ENST00000359683 BDNFP23560 247 aa13.14□□□□□ -0.31
NIF3L1-201ENST00000359683 ADORA2BP29275 332 aa13.14□□□□□ -0.31
NIF3L1-201ENST00000359683 MAGEA11P43364 429 aa13.14□□□□□ -0.31
NIF3L1-201ENST00000359683 CLCN4P51793 760 aa13.14□□□□□ -0.31
NIF3L1-201ENST00000359683 FMO1Q01740 532 aa13.14□□□□□ -0.31
NIF3L1-201ENST00000359683 ADCY1Q08828 1119 aa13.14□□□□□ -0.31
NIF3L1-201ENST00000359683 CCDC173Q0VFZ6 552 aa13.14□□□□□ -0.31
NIF3L1-201ENST00000359683 ADGRD2Q7Z7M1 963 aa13.14□□□□□ -0.31
NIF3L1-201ENST00000359683 FAM35AQ86V20 835 aa13.14□□□□□ -0.31
NIF3L1-201ENST00000359683 TTC30AQ86WT1 665 aa13.14□□□□□ -0.31
NIF3L1-201ENST00000359683 SLC22A17Q8WUG5 538 aa13.14□□□□□ -0.31
NIF3L1-201ENST00000359683 CHP1Q99653 195 aa13.14□□□□□ -0.31
NIF3L1-201ENST00000359683 MED10Q9BTT4 135 aa13.14□□□□□ -0.31
NIF3L1-201ENST00000359683 DUSP16Q9BY84 665 aa13.14□□□□□ -0.31
NIF3L1-201ENST00000359683 LHX5Q9H2C1 402 aa13.14□□□□□ -0.31
NIF3L1-201ENST00000359683 CRISPLD1Q9H336 500 aa13.14□□□□□ -0.31
NIF3L1-201ENST00000359683 CSNK1G1Q9HCP0 422 aa13.14□□□□□ -0.31
NIF3L1-201ENST00000359683 PRRC2BQ5JSZ5 2229 aaKnown RBP13.14□□□□□ -0.31
NIF3L1-201ENST00000359683 ATP8B3O60423 1300 aa13.14□□□□□ -0.31
NIF3L1-201ENST00000359683 SSU72P8A0A1W2PR75 194 aa13.13□□□□□ -0.31
NIF3L1-201ENST00000359683 SEC24AO95486 1093 aa13.13□□□□□ -0.31
NIF3L1-201ENST00000359683 HAPLN1P10915 354 aaPredicted RBP13.13□□□□□ -0.31
NIF3L1-201ENST00000359683 CYP2F1P24903 491 aa13.13□□□□□ -0.31
NIF3L1-201ENST00000359683 GPD2P43304 727 aa13.13□□□□□ -0.31
NIF3L1-201ENST00000359683 CDR1P51861 262 aa13.13□□□□□ -0.31
NIF3L1-201ENST00000359683 DUSP4Q13115 394 aa13.13□□□□□ -0.31
NIF3L1-201ENST00000359683 DUSP6Q16828 381 aa13.13□□□□□ -0.31
NIF3L1-201ENST00000359683 GOLGA7BQ2TAP0 167 aa13.13□□□□□ -0.31
NIF3L1-201ENST00000359683 TAF3Q5VWG9 929 aa13.13□□□□□ -0.31
NIF3L1-201ENST00000359683 DENND1BQ6P3S1 775 aa13.13□□□□□ -0.31
NIF3L1-201ENST00000359683 VSTM1Q6UX27 236 aa13.13□□□□□ -0.31
NIF3L1-201ENST00000359683 TCEAL8Q8IYN2 117 aa13.13□□□□□ -0.31
NIF3L1-201ENST00000359683 SLC30A5Q8TAD4 765 aa13.13□□□□□ -0.31
NIF3L1-201ENST00000359683 UBA3Q8TBC4 463 aa13.13□□□□□ -0.31
NIF3L1-201ENST00000359683 ATXN2LQ8WWM7 1075 aaKnown RBP13.13□□□□□ -0.31
NIF3L1-201ENST00000359683 SMARCD1Q96GM5 515 aa13.13□□□□□ -0.31
NIF3L1-201ENST00000359683 PCDHB18PQ96TA0 734 aa13.13□□□□□ -0.31
NIF3L1-201ENST00000359683 TLE6Q9H808 572 aa13.13□□□□□ -0.31
NIF3L1-201ENST00000359683 ABI2Q9NYB9 513 aaPredicted RBP13.13□□□□□ -0.31
NIF3L1-201ENST00000359683 HESX1Q9UBX0 185 aa13.13□□□□□ -0.31
NIF3L1-201ENST00000359683 ATG2AQ2TAZ0 1938 aa13.13□□□□□ -0.31
NIF3L1-201ENST00000359683 SPTBN5Q9NRC6 3674 aaKnown RBP13.13□□□□□ -0.31
NIF3L1-201ENST00000359683 PTPRDP23468 1912 aa13.13□□□□□ -0.31
NIF3L1-201ENST00000359683 DDX3XO00571 662 aaKnown RBP eCLIP13.13□□□□□ -0.317e-8■■■■□ 19.5
NIF3L1-201ENST00000359683 PER2O15055 1255 aa13.13□□□□□ -0.31
NIF3L1-201ENST00000359683 GLUD1P00367 558 aa13.13□□□□□ -0.31
NIF3L1-201ENST00000359683 CYP1A1P04798 512 aaPredicted RBP13.13□□□□□ -0.31
NIF3L1-201ENST00000359683 FAM200BP0CF97 657 aa13.13□□□□□ -0.31
NIF3L1-201ENST00000359683 NPR3P17342 541 aa13.13□□□□□ -0.31
NIF3L1-201ENST00000359683 TNFAIP3P21580 790 aa13.13□□□□□ -0.31
NIF3L1-201ENST00000359683 ANXA13P27216 316 aa13.13□□□□□ -0.31
NIF3L1-201ENST00000359683 SSTR3P32745 418 aaPredicted RBP13.13□□□□□ -0.31
NIF3L1-201ENST00000359683 CDH5P33151 784 aaPredicted RBP13.13□□□□□ -0.31
NIF3L1-201ENST00000359683 EIF4A3P38919 411 aaKnown RBP13.13□□□□□ -0.31
NIF3L1-201ENST00000359683 TUFMP49411 452 aaKnown RBP13.13□□□□□ -0.31
NIF3L1-201ENST00000359683 CACNA2D1P54289 1103 aa13.13□□□□□ -0.31
NIF3L1-201ENST00000359683 BCAT1P54687 386 aa13.13□□□□□ -0.31
NIF3L1-201ENST00000359683 ASTE1Q2TB18 679 aaPredicted RBP13.13□□□□□ -0.31
NIF3L1-201ENST00000359683 TDRD12Q587J7 1177 aaKnown RBP13.13□□□□□ -0.31
NIF3L1-201ENST00000359683 TRIM72Q6ZMU5 477 aa13.13□□□□□ -0.31
NIF3L1-201ENST00000359683 CLEC20AQ6ZU45 233 aa13.13□□□□□ -0.31
NIF3L1-201ENST00000359683 TMEM139Q8IV31 216 aa13.13□□□□□ -0.31
NIF3L1-201ENST00000359683 WDTC1Q8N5D0 677 aa13.13□□□□□ -0.31
NIF3L1-201ENST00000359683 ZMIZ2Q8NF64 920 aa13.13□□□□□ -0.31
NIF3L1-201ENST00000359683 SLC35F5Q8WV83 523 aa13.13□□□□□ -0.31
NIF3L1-201ENST00000359683 CDCA3Q99618 268 aaPredicted RBP13.13□□□□□ -0.31
NIF3L1-201ENST00000359683 SMOQ99835 787 aa13.13□□□□□ -0.31
NIF3L1-201ENST00000359683 RHOBTB2Q9BYZ6 727 aa13.13□□□□□ -0.31
NIF3L1-201ENST00000359683 UBXN6Q9BZV1 441 aa13.13□□□□□ -0.31
NIF3L1-201ENST00000359683 NSUN3Q9H649 340 aaKnown RBP13.13□□□□□ -0.31
NIF3L1-201ENST00000359683 TMEM30AQ9NV96 361 aa13.13□□□□□ -0.31
NIF3L1-201ENST00000359683 FBXW11Q9UKB1 542 aa13.13□□□□□ -0.31
NIF3L1-201ENST00000359683 SLC27A5Q9Y2P5 690 aa13.13□□□□□ -0.31
NIF3L1-201ENST00000359683 MTCH2Q9Y6C9 303 aa13.13□□□□□ -0.31
NIF3L1-201ENST00000359683 M0QYV0 167 aa13.12□□□□□ -0.31
NIF3L1-201ENST00000359683 AP1G2O75843 785 aa13.12□□□□□ -0.31
NIF3L1-201ENST00000359683 BEST1O76090 585 aa13.12□□□□□ -0.31
NIF3L1-201ENST00000359683 LSM8O95777 96 aaKnown RBP13.12□□□□□ -0.31
NIF3L1-201ENST00000359683 SETSIPP0DME0 302 aa13.12□□□□□ -0.31
NIF3L1-201ENST00000359683 UNGP13051 313 aaPredicted RBP13.12□□□□□ -0.31
NIF3L1-201ENST00000359683 ELF1P32519 619 aa13.12□□□□□ -0.31
NIF3L1-201ENST00000359683 PDE4CQ08493 712 aa13.12□□□□□ -0.31
NIF3L1-201ENST00000359683 BST2Q10589 180 aaKnown RBP13.12□□□□□ -0.31
NIF3L1-201ENST00000359683 KCNC3Q14003 757 aa13.12□□□□□ -0.31
NIF3L1-201ENST00000359683 CYP26C1Q6V0L0 522 aa13.12□□□□□ -0.31
NIF3L1-201ENST00000359683 RTL10Q7L3V2 364 aa13.12□□□□□ -0.31
NIF3L1-201ENST00000359683 RBM23Q86U06 439 aaKnown RBP13.12□□□□□ -0.31
NIF3L1-201ENST00000359683 TMTC1Q8IUR5 882 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms