RNA–Protein interactions for RNA: ENST00000359574.7

LFNG-203, Transcript of LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LFNG, Length 1,377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LFNG-203ENST00000359574 SNX25Q9H3E2 840 aa29.82■■■□□ 2.36
LFNG-203ENST00000359574 EBF3Q9H4W6 596 aa29.82■■■□□ 2.36
LFNG-203ENST00000359574 TRPC7Q9HCX4 862 aa29.82■■■□□ 2.36
LFNG-203ENST00000359574 OTOL1A6NHN0 477 aaPredicted RBP29.81■■■□□ 2.36
LFNG-203ENST00000359574 CMA1P23946 247 aa29.81■■■□□ 2.36
LFNG-203ENST00000359574 GNL1P36915 607 aaPredicted RBP29.81■■■□□ 2.36
LFNG-203ENST00000359574 MYL6P60660 151 aa29.81■■■□□ 2.36
LFNG-203ENST00000359574 CYP27A1Q02318 531 aa29.81■■■□□ 2.36
LFNG-203ENST00000359574 MAPRE1Q15691 268 aaKnown RBP29.81■■■□□ 2.36
LFNG-203ENST00000359574 WDR72Q3MJ13 1102 aa29.81■■■□□ 2.36
LFNG-203ENST00000359574 KMT5BQ4FZB7 885 aa29.81■■■□□ 2.36
LFNG-203ENST00000359574 SPEM1Q8N4L4 309 aa29.81■■■□□ 2.36
LFNG-203ENST00000359574 PCED1BQ96HM7 432 aa29.81■■■□□ 2.36
LFNG-203ENST00000359574 CYP2S1Q96SQ9 504 aa29.81■■■□□ 2.36
LFNG-203ENST00000359574 XYLT2Q9H1B5 865 aa29.81■■■□□ 2.36
LFNG-203ENST00000359574 EPC1Q9H2F5 836 aa29.81■■■□□ 2.36
LFNG-203ENST00000359574 TACC1O75410 805 aa29.8■■■□□ 2.36
LFNG-203ENST00000359574 CXCL12P48061 93 aa29.8■■■□□ 2.36
LFNG-203ENST00000359574 TNNC1P63316 161 aa29.8■■■□□ 2.36
LFNG-203ENST00000359574 CCINQ13939 588 aa29.8■■■□□ 2.36
LFNG-203ENST00000359574 ZNF268Q14587 947 aaPredicted RBP29.8■■■□□ 2.36
LFNG-203ENST00000359574 PPP2R5DQ14738 602 aa29.8■■■□□ 2.36
LFNG-203ENST00000359574 MDH1BQ5I0G3 518 aa29.8■■■□□ 2.36
LFNG-203ENST00000359574 VSTM1Q6UX27 236 aa29.8■■■□□ 2.36
LFNG-203ENST00000359574 GOLGA5Q8TBA6 731 aa29.8■■■□□ 2.36
LFNG-203ENST00000359574 MYCBPAPQ8TBZ2 947 aa29.8■■■□□ 2.36
LFNG-203ENST00000359574 SMG5Q9UPR3 1016 aaKnown RBP29.8■■■□□ 2.36
LFNG-203ENST00000359574 DMXL1Q9Y485 3027 aa29.8■■■□□ 2.36
LFNG-203ENST00000359574 ARSAP15289 507 aa29.79■■■□□ 2.36
LFNG-203ENST00000359574 TRPC3Q13507 836 aa29.79■■■□□ 2.36
LFNG-203ENST00000359574 RUNX3Q13761 415 aa29.79■■■□□ 2.36
LFNG-203ENST00000359574 DGKKQ5KSL6 1271 aa29.79■■■□□ 2.36
LFNG-203ENST00000359574 OR6B3Q8NGW1 331 aa29.79■■■□□ 2.36
LFNG-203ENST00000359574 CHFRQ96EP1 664 aa29.79■■■□□ 2.36
LFNG-203ENST00000359574 SPATA17Q96L03 361 aa29.79■■■□□ 2.36
LFNG-203ENST00000359574 SPATA32Q96LK8 384 aa29.79■■■□□ 2.36
LFNG-203ENST00000359574 DPEP3Q9H4B8 488 aa29.79■■■□□ 2.36
LFNG-203ENST00000359574 C2orf42Q9NWW7 574 aa29.79■■■□□ 2.36
LFNG-203ENST00000359574 NXF1Q9UBU9 619 aaKnown RBP29.79■■■□□ 2.36
LFNG-203ENST00000359574 HPSEQ9Y251 543 aa29.79■■■□□ 2.36
LFNG-203ENST00000359574 C2orf78A6NCI8 922 aa29.78■■■□□ 2.36
LFNG-203ENST00000359574 GRIK1P39086 918 aa29.78■■■□□ 2.36
LFNG-203ENST00000359574 NRLP54845 237 aa29.78■■■□□ 2.36
LFNG-203ENST00000359574 USP46P62068 366 aa29.78■■■□□ 2.36
LFNG-203ENST00000359574 CC2D1AQ6P1N0 951 aaPredicted RBP29.78■■■□□ 2.36
LFNG-203ENST00000359574 DMAC2Q9NW81 257 aa29.78■■■□□ 2.36
LFNG-203ENST00000359574 TRAV19A0A0A6YYK7 116 aa29.77■■■□□ 2.36
LFNG-203ENST00000359574 STAU1O95793 577 aaKnown RBP29.77■■■□□ 2.36
LFNG-203ENST00000359574 ID4P47928 161 aa29.77■■■□□ 2.36
LFNG-203ENST00000359574 KRT85P78386 507 aa29.77■■■□□ 2.36
LFNG-203ENST00000359574 FAM160A1Q05DH4 1040 aa29.77■■■□□ 2.36
LFNG-203ENST00000359574 TDRD10Q5VZ19 366 aaKnown RBP29.77■■■□□ 2.36
LFNG-203ENST00000359574 TTC16Q8NEE8 873 aa29.77■■■□□ 2.36
LFNG-203ENST00000359574 PARD3BQ8TEW8 1205 aa29.77■■■□□ 2.36
LFNG-203ENST00000359574 KCTD10Q9H3F6 313 aa29.77■■■□□ 2.36
LFNG-203ENST00000359574 GCNT4Q9P109 453 aa29.77■■■□□ 2.36
LFNG-203ENST00000359574 USP25Q9UHP3 1055 aa29.77■■■□□ 2.36
LFNG-203ENST00000359574 LRRIQ3A6PVS8 624 aaPredicted RBP29.77■■■□□ 2.36
LFNG-203ENST00000359574 PHACTR2O75167 634 aa29.77■■■□□ 2.36
LFNG-203ENST00000359574 CKMP06732 381 aa29.77■■■□□ 2.36
LFNG-203ENST00000359574 FAM163BP0C2L3 166 aa29.77■■■□□ 2.36
LFNG-203ENST00000359574 USP17L7P0C7H9 530 aa29.77■■■□□ 2.36
LFNG-203ENST00000359574 PTPN1P18031 435 aaKnown RBP29.77■■■□□ 2.36
LFNG-203ENST00000359574 ATICP31939 592 aa29.77■■■□□ 2.36
LFNG-203ENST00000359574 DMWDQ09019 674 aa29.77■■■□□ 2.36
LFNG-203ENST00000359574 PSMD2Q13200 908 aa29.77■■■□□ 2.36
LFNG-203ENST00000359574 ZNF77Q15935 545 aa29.77■■■□□ 2.36
LFNG-203ENST00000359574 ARL14EPQ8N8R7 260 aaPredicted RBP29.77■■■□□ 2.36
LFNG-203ENST00000359574 FSIP1Q8NA03 581 aa29.77■■■□□ 2.36
LFNG-203ENST00000359574 SYAP1Q96A49 352 aaPredicted RBP29.77■■■□□ 2.36
LFNG-203ENST00000359574 NCDNQ9UBB6 729 aa29.77■■■□□ 2.36
LFNG-203ENST00000359574 F8VP50 259 aa29.76■■■□□ 2.35
LFNG-203ENST00000359574 ANXA13P27216 316 aa29.76■■■□□ 2.35
LFNG-203ENST00000359574 CLDN10P78369 228 aa29.76■■■□□ 2.35
LFNG-203ENST00000359574 BIRC3Q13489 604 aa29.76■■■□□ 2.35
LFNG-203ENST00000359574 MTF1Q14872 753 aa29.76■■■□□ 2.35
LFNG-203ENST00000359574 DENND5BQ6ZUT9 1274 aa29.76■■■□□ 2.35
LFNG-203ENST00000359574 ELMO3Q96BJ8 720 aa29.76■■■□□ 2.35
LFNG-203ENST00000359574 CEP295NLQ96MC4 621 aa29.76■■■□□ 2.35
LFNG-203ENST00000359574 SMYD3Q9H7B4 428 aa29.76■■■□□ 2.35
LFNG-203ENST00000359574 TMEM30AQ9NV96 361 aa29.76■■■□□ 2.35
LFNG-203ENST00000359574 K7ESF4 209 aa29.75■■■□□ 2.35
LFNG-203ENST00000359574 TRIM66O15016 1216 aa29.75■■■□□ 2.35
LFNG-203ENST00000359574 PAPSS2O95340 614 aaPredicted RBP29.75■■■□□ 2.35
LFNG-203ENST00000359574 CACNA2D1P54289 1103 aa29.75■■■□□ 2.35
LFNG-203ENST00000359574 USP4Q13107 963 aa29.75■■■□□ 2.35
LFNG-203ENST00000359574 PDGFRLQ15198 375 aa29.75■■■□□ 2.35
LFNG-203ENST00000359574 SLC9A9Q8IVB4 645 aa29.75■■■□□ 2.35
LFNG-203ENST00000359574 TMEM174Q8WUU8 243 aa29.75■■■□□ 2.35
LFNG-203ENST00000359574 GTF3C3Q9Y5Q9 886 aa29.75■■■□□ 2.35
LFNG-203ENST00000359574 A8MXQ7 604 aa29.74■■■□□ 2.35
LFNG-203ENST00000359574 HOXC13P31276 330 aa29.74■■■□□ 2.35
LFNG-203ENST00000359574 NDUFA8P51970 172 aa29.74■■■□□ 2.35
LFNG-203ENST00000359574 KCNB1Q14721 858 aa29.74■■■□□ 2.35
LFNG-203ENST00000359574 ZNF699Q32M78 642 aa29.74■■■□□ 2.35
LFNG-203ENST00000359574 TMEM196Q5HYL7 178 aa29.74■■■□□ 2.35
LFNG-203ENST00000359574 NAIF1Q69YI7 327 aaPredicted RBP29.74■■■□□ 2.35
LFNG-203ENST00000359574 FSTL4Q6MZW2 842 aa29.74■■■□□ 2.35
LFNG-203ENST00000359574 SYNPOQ8N3V7 929 aa29.74■■■□□ 2.35
LFNG-203ENST00000359574 B3GALNT2Q8NCR0 500 aa29.74■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms