RNA–Protein interactions for RNA: ENST00000358808.6

CLIP1-202, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLIP1, Length 5,880 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-202ENST00000358808 S100A13Q99584 98 aa10.57□□□□□ -0.72
CLIP1-202ENST00000358808 SIKE1Q9BRV8 207 aa10.57□□□□□ -0.72
CLIP1-202ENST00000358808 RSPH9Q9H1X1 276 aaPredicted RBP10.57□□□□□ -0.72
CLIP1-202ENST00000358808 MRPL39Q9NYK5 338 aaKnown RBP10.57□□□□□ -0.72
CLIP1-202ENST00000358808 RNF112Q9ULX5 631 aa10.57□□□□□ -0.72
CLIP1-202ENST00000358808 STON1Q9Y6Q2 735 aa10.57□□□□□ -0.72
CLIP1-202ENST00000358808 LGALS16A8MUM7 142 aa10.57□□□□□ -0.72
CLIP1-202ENST00000358808 AKAP5P24588 427 aa10.57□□□□□ -0.72
CLIP1-202ENST00000358808 SPRP35270 261 aaPredicted RBP10.57□□□□□ -0.72
CLIP1-202ENST00000358808 STAT4Q14765 748 aa10.57□□□□□ -0.72
CLIP1-202ENST00000358808 NCF4Q15080 339 aa10.57□□□□□ -0.72
CLIP1-202ENST00000358808 TCEAL5Q5H9L2 206 aa10.57□□□□□ -0.72
CLIP1-202ENST00000358808 SKA1Q96BD8 255 aa10.57□□□□□ -0.72
CLIP1-202ENST00000358808 CNDP1Q96KN2 507 aa10.57□□□□□ -0.72
CLIP1-202ENST00000358808 PRMT1Q99873 361 aaKnown RBP10.57□□□□□ -0.72
CLIP1-202ENST00000358808 FOXP3Q9BZS1 431 aa10.57□□□□□ -0.72
CLIP1-202ENST00000358808 ARMC7Q9H6L4 198 aa10.57□□□□□ -0.72
CLIP1-202ENST00000358808 ABHD10Q9NUJ1 306 aa10.57□□□□□ -0.72
CLIP1-202ENST00000358808 KLHL20Q9Y2M5 609 aa10.57□□□□□ -0.72
CLIP1-202ENST00000358808 TMEM191CA6NGB0 347 aa10.57□□□□□ -0.72
CLIP1-202ENST00000358808 CCDC130P13994 396 aa10.57□□□□□ -0.72
CLIP1-202ENST00000358808 MAGEA9P43362 315 aa10.57□□□□□ -0.72
CLIP1-202ENST00000358808 ACOT2P49753 483 aa10.57□□□□□ -0.72
CLIP1-202ENST00000358808 CPT1AP50416 773 aa10.57□□□□□ -0.72
CLIP1-202ENST00000358808 ACTN3Q08043 901 aaPredicted RBP10.57□□□□□ -0.72
CLIP1-202ENST00000358808 PDK1Q15118 436 aa10.57□□□□□ -0.72
CLIP1-202ENST00000358808 PFKFB3Q16875 520 aaPredicted RBP10.57□□□□□ -0.72
CLIP1-202ENST00000358808 CLEC16AQ2KHT3 1053 aa10.57□□□□□ -0.72
CLIP1-202ENST00000358808 ANGEL2Q5VTE6 544 aaKnown RBP10.57□□□□□ -0.72
CLIP1-202ENST00000358808 NLRP14Q86W24 1093 aa10.57□□□□□ -0.72
CLIP1-202ENST00000358808 WDR36Q8NI36 951 aaKnown RBP10.57□□□□□ -0.72
CLIP1-202ENST00000358808 MRPS31Q92665 395 aaKnown RBP10.57□□□□□ -0.72
CLIP1-202ENST00000358808 SENP7Q9BQF6 1050 aa10.57□□□□□ -0.72
CLIP1-202ENST00000358808 THTPAQ9BU02 230 aa10.57□□□□□ -0.72
CLIP1-202ENST00000358808 DCP1AQ9NPI6 582 aaPredicted RBP10.57□□□□□ -0.72
CLIP1-202ENST00000358808 AVENQ9NQS1 362 aaPredicted RBP10.57□□□□□ -0.72
CLIP1-202ENST00000358808 UBR1Q8IWV7 1749 aa10.57□□□□□ -0.72
CLIP1-202ENST00000358808 ESYT3A0FGR9 886 aa10.57□□□□□ -0.72
CLIP1-202ENST00000358808 CHURC1-FNTBB4DL54 471 aa10.57□□□□□ -0.72
CLIP1-202ENST00000358808 SNAP23O00161 211 aa10.57□□□□□ -0.72
CLIP1-202ENST00000358808 RTN2O75298 545 aa10.57□□□□□ -0.72
CLIP1-202ENST00000358808 ACADSBP45954 432 aa10.57□□□□□ -0.72
CLIP1-202ENST00000358808 HUNKP57058 714 aa10.57□□□□□ -0.72
CLIP1-202ENST00000358808 EDRF1Q3B7T1 1238 aa10.57□□□□□ -0.72
CLIP1-202ENST00000358808 MIIPQ5JXC2 388 aa10.57□□□□□ -0.72
CLIP1-202ENST00000358808 TRMT2AQ8IZ69 625 aaKnown RBP10.57□□□□□ -0.72
CLIP1-202ENST00000358808 BLOC1S5Q8TDH9 187 aa10.57□□□□□ -0.72
CLIP1-202ENST00000358808 RSPH1Q8WYR4 309 aa10.57□□□□□ -0.72
CLIP1-202ENST00000358808 EMILIN2Q9BXX0 1053 aa10.57□□□□□ -0.72
CLIP1-202ENST00000358808 TRIT1Q9H3H1 467 aaKnown RBP10.57□□□□□ -0.72
CLIP1-202ENST00000358808 ALBP02768 609 aa10.56□□□□□ -0.72
CLIP1-202ENST00000358808 POLBP06746 335 aa10.56□□□□□ -0.72
CLIP1-202ENST00000358808 MAPK1P28482 360 aa10.56□□□□□ -0.72
CLIP1-202ENST00000358808 WEE1P30291 646 aa10.56□□□□□ -0.72
CLIP1-202ENST00000358808 AMPD2Q01433 879 aa10.56□□□□□ -0.72
CLIP1-202ENST00000358808 SEMA3FQ13275 785 aa10.56□□□□□ -0.72
CLIP1-202ENST00000358808 GALNTL6Q49A17 601 aa10.56□□□□□ -0.72
CLIP1-202ENST00000358808 DNAL1Q4LDG9 190 aa10.56□□□□□ -0.72
CLIP1-202ENST00000358808 FAM45BPQ6NSW5 357 aa10.56□□□□□ -0.72
CLIP1-202ENST00000358808 TIGD7Q6NT04 549 aaPredicted RBP10.56□□□□□ -0.72
CLIP1-202ENST00000358808 ZCCHC8Q6NZY4 707 aaKnown RBP10.56□□□□□ -0.72
CLIP1-202ENST00000358808 LONP2Q86WA8 852 aa10.56□□□□□ -0.72
CLIP1-202ENST00000358808 CDK20Q8IZL9 346 aa10.56□□□□□ -0.72
CLIP1-202ENST00000358808 USP13Q92995 863 aaPredicted RBP10.56□□□□□ -0.72
CLIP1-202ENST00000358808 KCNK16Q96T55 309 aa10.56□□□□□ -0.72
CLIP1-202ENST00000358808 SEPT3Q9UH03 358 aa10.56□□□□□ -0.72
CLIP1-202ENST00000358808 LRRC7Q96NW7 1537 aa10.56□□□□□ -0.72
CLIP1-202ENST00000358808 F5H5T6 163 aa10.56□□□□□ -0.72
CLIP1-202ENST00000358808 VPS26AO75436 327 aa10.56□□□□□ -0.72
CLIP1-202ENST00000358808 FGFR1P11362 822 aa10.56□□□□□ -0.72
CLIP1-202ENST00000358808 GYS1P13807 737 aa10.56□□□□□ -0.72
CLIP1-202ENST00000358808 NOS3P29474 1203 aa10.56□□□□□ -0.72
CLIP1-202ENST00000358808 AVPR1AP37288 418 aa10.56□□□□□ -0.72
CLIP1-202ENST00000358808 QRICH1Q2TAL8 776 aa10.56□□□□□ -0.72
CLIP1-202ENST00000358808 LDHDQ86WU2 507 aa10.56□□□□□ -0.72
CLIP1-202ENST00000358808 DENND6AQ8IWF6 608 aa10.56□□□□□ -0.72
CLIP1-202ENST00000358808 PARP9Q8IXQ6 854 aa10.56□□□□□ -0.72
CLIP1-202ENST00000358808 STAG2Q8N3U4 1231 aa10.56□□□□□ -0.72
CLIP1-202ENST00000358808 OSBPL9Q96SU4 736 aa10.56□□□□□ -0.72
CLIP1-202ENST00000358808 TRPC4Q9UBN4 977 aa10.56□□□□□ -0.72
CLIP1-202ENST00000358808 ANAPC2Q9UJX6 822 aa10.56□□□□□ -0.72
CLIP1-202ENST00000358808 ADAM30Q9UKF2 790 aa10.56□□□□□ -0.72
CLIP1-202ENST00000358808 VPS9D1Q9Y2B5 631 aa10.56□□□□□ -0.72
CLIP1-202ENST00000358808 PFASO15067 1338 aa10.56□□□□□ -0.72
CLIP1-202ENST00000358808 NPTXRO95502 500 aa10.56□□□□□ -0.72
CLIP1-202ENST00000358808 CNPP09543 421 aaKnown RBP10.56□□□□□ -0.72
CLIP1-202ENST00000358808 CYP2C9P11712 490 aa10.56□□□□□ -0.72
CLIP1-202ENST00000358808 ODC1P11926 461 aa10.56□□□□□ -0.72
CLIP1-202ENST00000358808 ZNF200P98182 395 aaPredicted RBP10.56□□□□□ -0.72
CLIP1-202ENST00000358808 COG2Q14746 738 aa10.56□□□□□ -0.72
CLIP1-202ENST00000358808 CRAMP1Q96RY5 1269 aa10.56□□□□□ -0.72
CLIP1-202ENST00000358808 GJB4Q9NTQ9 266 aa10.56□□□□□ -0.72
CLIP1-202ENST00000358808 GGA3Q9NZ52 723 aa10.56□□□□□ -0.72
CLIP1-202ENST00000358808 WDR35Q9P2L0 1181 aa10.56□□□□□ -0.72
CLIP1-202ENST00000358808 GGT7Q9UJ14 662 aa10.56□□□□□ -0.72
CLIP1-202ENST00000358808 TSC22D4Q9Y3Q8 395 aa10.56□□□□□ -0.72
CLIP1-202ENST00000358808 GNG14A0A1W2PPG7 69 aa10.56□□□□□ -0.72
CLIP1-202ENST00000358808 SPTLC1O15269 473 aa10.56□□□□□ -0.72
CLIP1-202ENST00000358808 CKBP12277 381 aa10.56□□□□□ -0.72
CLIP1-202ENST00000358808 GRM4Q14833 912 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms