RNA–Protein interactions for RNA: ENST00000358763.6

SYN3-202, Transcript of synapsin III, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SYN3, Length 3,126 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-202ENST00000358763 GOLGA6L10A0A0M3HER8 536 aa12.61□□□□□ -0.39
SYN3-202ENST00000358763 GABRDO14764 452 aa12.61□□□□□ -0.39
SYN3-202ENST00000358763 PSTPIP1O43586 416 aa12.61□□□□□ -0.39
SYN3-202ENST00000358763 ERLIN1O75477 346 aa12.61□□□□□ -0.39
SYN3-202ENST00000358763 PTPN1P18031 435 aaKnown RBP12.61□□□□□ -0.39
SYN3-202ENST00000358763 BCAT1P54687 386 aa12.61□□□□□ -0.39
SYN3-202ENST00000358763 GSCP56915 257 aaPredicted RBP12.61□□□□□ -0.39
SYN3-202ENST00000358763 BST2Q10589 180 aaKnown RBP12.61□□□□□ -0.39
SYN3-202ENST00000358763 ZNF280BQ86YH2 543 aa12.61□□□□□ -0.39
SYN3-202ENST00000358763 SCUBE3Q8IX30 993 aa12.61□□□□□ -0.39
SYN3-202ENST00000358763 ANKRD52Q8NB46 1076 aa12.61□□□□□ -0.39
SYN3-202ENST00000358763 CLEC4CQ8WTT0 213 aa12.61□□□□□ -0.39
SYN3-202ENST00000358763 RNF25Q96BH1 459 aaPredicted RBP12.61□□□□□ -0.39
SYN3-202ENST00000358763 PPP1R12CQ9BZL4 782 aa12.61□□□□□ -0.39
SYN3-202ENST00000358763 CCL23P55773 120 aa12.61□□□□□ -0.39
SYN3-202ENST00000358763 PIGHQ14442 188 aaPredicted RBP12.61□□□□□ -0.39
SYN3-202ENST00000358763 TRADDQ15628 312 aa12.61□□□□□ -0.39
SYN3-202ENST00000358763 TCTN1Q2MV58 587 aa12.61□□□□□ -0.39
SYN3-202ENST00000358763 GLE1Q53GS7 698 aaKnown RBP12.61□□□□□ -0.39
SYN3-202ENST00000358763 TRNP1Q6NT89 227 aa12.61□□□□□ -0.39
SYN3-202ENST00000358763 FUKQ8N0W3 1084 aa12.61□□□□□ -0.39
SYN3-202ENST00000358763 SYT15Q9BQS2 421 aa12.61□□□□□ -0.39
SYN3-202ENST00000358763 MED10Q9BTT4 135 aa12.61□□□□□ -0.39
SYN3-202ENST00000358763 HEMGNQ9BXL5 484 aa12.61□□□□□ -0.39
SYN3-202ENST00000358763 SLC4A5Q9BY07 1137 aa12.61□□□□□ -0.39
SYN3-202ENST00000358763 EPB41L5Q9HCM4 733 aa12.61□□□□□ -0.39
SYN3-202ENST00000358763 CRTAC1Q9NQ79 661 aa12.61□□□□□ -0.39
SYN3-202ENST00000358763 TTI1O43156 1089 aa12.6□□□□□ -0.39
SYN3-202ENST00000358763 PAPSS1O43252 624 aaPredicted RBP12.6□□□□□ -0.39
SYN3-202ENST00000358763 ZRANB2O95218 330 aaKnown RBP eCLIP12.6□□□□□ -0.39
SYN3-202ENST00000358763 LCP1P13796 627 aa12.6□□□□□ -0.39
SYN3-202ENST00000358763 FLT3P36888 993 aa12.6□□□□□ -0.39
SYN3-202ENST00000358763 RABGGTBP53611 331 aa12.6□□□□□ -0.39
SYN3-202ENST00000358763 SMTNL2Q2TAL5 461 aa12.6□□□□□ -0.39
SYN3-202ENST00000358763 BEND6Q5SZJ8 279 aaPredicted RBP12.6□□□□□ -0.39
SYN3-202ENST00000358763 CD300LGQ6UXG3 332 aa12.6□□□□□ -0.39
SYN3-202ENST00000358763 ANKS1BQ7Z6G8 1248 aa12.6□□□□□ -0.39
SYN3-202ENST00000358763 ARFGAP1Q8N6T3 406 aa12.6□□□□□ -0.39
SYN3-202ENST00000358763 PRELID2Q8N945 189 aa12.6□□□□□ -0.39
SYN3-202ENST00000358763 DIS3LQ8TF46 1054 aaKnown RBP12.6□□□□□ -0.39
SYN3-202ENST00000358763 ZWILCHQ9H900 591 aa12.6□□□□□ -0.39
SYN3-202ENST00000358763 SCN5AQ14524 2016 aa12.6□□□□□ -0.39
SYN3-202ENST00000358763 LRCH4O75427 683 aa12.6□□□□□ -0.39
SYN3-202ENST00000358763 DDHD2O94830 711 aa12.6□□□□□ -0.39
SYN3-202ENST00000358763 KRT1P04264 644 aa12.6□□□□□ -0.39
SYN3-202ENST00000358763 SETSIPP0DME0 302 aa12.6□□□□□ -0.39
SYN3-202ENST00000358763 HSPA6P17066 643 aa12.6□□□□□ -0.39
SYN3-202ENST00000358763 AARSP49588 968 aaKnown RBP eCLIP12.6□□□□□ -0.39
SYN3-202ENST00000358763 SMC1AQ14683 1233 aaKnown RBP12.6□□□□□ -0.39
SYN3-202ENST00000358763 RAB6CQ53S08 254 aa12.6□□□□□ -0.39
SYN3-202ENST00000358763 OLFML1Q6UWY5 402 aa12.6□□□□□ -0.39
SYN3-202ENST00000358763 PLVAPQ9BX97 442 aa12.6□□□□□ -0.39
SYN3-202ENST00000358763 RAB6CQ9H0N0 254 aa12.6□□□□□ -0.39
SYN3-202ENST00000358763 MYBPHLA2RUH7 354 aa12.6□□□□□ -0.39
SYN3-202ENST00000358763 BEST1O76090 585 aa12.6□□□□□ -0.39
SYN3-202ENST00000358763 EOMESO95936 686 aa12.6□□□□□ -0.39
SYN3-202ENST00000358763 TUBBP07437 444 aa12.6□□□□□ -0.39
SYN3-202ENST00000358763 RARAP10276 462 aa12.6□□□□□ -0.39
SYN3-202ENST00000358763 RALAP11233 206 aa12.6□□□□□ -0.39
SYN3-202ENST00000358763 MCM3P25205 808 aa12.6□□□□□ -0.39
SYN3-202ENST00000358763 GATMP50440 423 aa12.6□□□□□ -0.39
SYN3-202ENST00000358763 CDO1Q16878 200 aa12.6□□□□□ -0.39
SYN3-202ENST00000358763 C15orf59Q2T9L4 293 aaPredicted RBP12.6□□□□□ -0.39
SYN3-202ENST00000358763 GLIPR1L2Q4G1C9 344 aa12.6□□□□□ -0.39
SYN3-202ENST00000358763 NOMO2Q5JPE7 1267 aa12.6□□□□□ -0.39
SYN3-202ENST00000358763 SH3PXD2AQ5TCZ1 1133 aa12.6□□□□□ -0.39
SYN3-202ENST00000358763 CCNI2Q6ZMN8 369 aaPredicted RBP12.6□□□□□ -0.39
SYN3-202ENST00000358763 PAQR9Q6ZVX9 377 aa12.6□□□□□ -0.39
SYN3-202ENST00000358763 MTERF4Q7Z6M4 381 aaKnown RBP12.6□□□□□ -0.39
SYN3-202ENST00000358763 KATNAL2Q8IYT4 538 aa12.6□□□□□ -0.39
SYN3-202ENST00000358763 TMEM86AQ8N2M4 240 aa12.6□□□□□ -0.39
SYN3-202ENST00000358763 NIPA2Q8N8Q9 360 aa12.6□□□□□ -0.39
SYN3-202ENST00000358763 RXFP2Q8WXD0 754 aa12.6□□□□□ -0.39
SYN3-202ENST00000358763 IFT81Q8WYA0 676 aa12.6□□□□□ -0.39
SYN3-202ENST00000358763 TRIM51Q9BSJ1 452 aa12.6□□□□□ -0.39
SYN3-202ENST00000358763 DNAI2Q9GZS0 605 aa12.6□□□□□ -0.39
SYN3-202ENST00000358763 PCSK1NQ9UHG2 260 aa12.6□□□□□ -0.39
SYN3-202ENST00000358763 SASH3O75995 380 aa12.59□□□□□ -0.39
SYN3-202ENST00000358763 ODC1P11926 461 aa12.59□□□□□ -0.39
SYN3-202ENST00000358763 CARSP49589 748 aaKnown RBP12.59□□□□□ -0.39
SYN3-202ENST00000358763 MNX1P50219 401 aaPredicted RBP12.59□□□□□ -0.39
SYN3-202ENST00000358763 SIX1Q15475 284 aaPredicted RBP12.59□□□□□ -0.39
SYN3-202ENST00000358763 TRIM60Q495X7 471 aa12.59□□□□□ -0.39
SYN3-202ENST00000358763 PLEKHG4Q58EX7 1191 aa12.59□□□□□ -0.39
SYN3-202ENST00000358763 KCNT1Q5JUK3 1230 aa12.59□□□□□ -0.39
SYN3-202ENST00000358763 TMEM110Q86TL2 294 aa12.59□□□□□ -0.39
SYN3-202ENST00000358763 HNRNPLLQ8WVV9 542 aaKnown RBP12.59□□□□□ -0.39
SYN3-202ENST00000358763 MAGOHBQ96A72 148 aaKnown RBP12.59□□□□□ -0.39
SYN3-202ENST00000358763 FTHL17Q9BXU8 183 aa12.59□□□□□ -0.39
SYN3-202ENST00000358763 HIPK3Q9H422 1215 aa12.59□□□□□ -0.39
SYN3-202ENST00000358763 SLITRK6Q9H5Y7 841 aa12.59□□□□□ -0.39
SYN3-202ENST00000358763 KRT82Q9NSB4 513 aa12.59□□□□□ -0.39
SYN3-202ENST00000358763 TBC1D13Q9NVG8 400 aa12.59□□□□□ -0.39
SYN3-202ENST00000358763 PITPNM1O00562 1244 aa12.59□□□□□ -0.39
SYN3-202ENST00000358763 PHF2O75151 1096 aa12.59□□□□□ -0.39
SYN3-202ENST00000358763 PDGFRAP16234 1089 aa12.59□□□□□ -0.39
SYN3-202ENST00000358763 IL1R2P27930 398 aa12.59□□□□□ -0.39
SYN3-202ENST00000358763 LHX1P48742 406 aa12.59□□□□□ -0.39
SYN3-202ENST00000358763 FAM189BP81408 668 aa12.59□□□□□ -0.39
SYN3-202ENST00000358763 RNASELQ05823 741 aaKnown RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms