RNA–Protein interactions for RNA: ENST00000357980.8

TPM1-205, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-205ENST00000357980 MIF4GDA9UHW6 222 aaKnown RBP18■□□□□ 0.47
TPM1-205ENST00000357980 CLDN5O00501 218 aa18■□□□□ 0.47
TPM1-205ENST00000357980 KCNK3O14649 394 aa18■□□□□ 0.47
TPM1-205ENST00000357980 TADA3O75528 432 aa18■□□□□ 0.47
TPM1-205ENST00000357980 PLA2G4AP47712 749 aa18■□□□□ 0.47
TPM1-205ENST00000357980 SLC11A1P49279 550 aa18■□□□□ 0.47
TPM1-205ENST00000357980 RGS7P49802 495 aa18■□□□□ 0.47
TPM1-205ENST00000357980 ZNF252P-AS1Q0IIN9 211 aa18■□□□□ 0.47
TPM1-205ENST00000357980 FAM171BQ6P995 826 aa18■□□□□ 0.47
TPM1-205ENST00000357980 ZNF572Q7Z3I7 529 aaPredicted RBP18■□□□□ 0.47
TPM1-205ENST00000357980 TMEM199Q8N511 208 aa18■□□□□ 0.47
TPM1-205ENST00000357980 OR10T2Q8NGX3 314 aa18■□□□□ 0.47
TPM1-205ENST00000357980 TOP1MTQ969P6 601 aa18■□□□□ 0.47
TPM1-205ENST00000357980 PCED1BQ96HM7 432 aa18■□□□□ 0.47
TPM1-205ENST00000357980 TMEM175Q9BSA9 504 aa18■□□□□ 0.47
TPM1-205ENST00000357980 DUSP16Q9BY84 665 aa18■□□□□ 0.47
TPM1-205ENST00000357980 MIS12Q9H081 205 aa18■□□□□ 0.47
TPM1-205ENST00000357980 CYLDQ9NQC7 956 aa18■□□□□ 0.47
TPM1-205ENST00000357980 PCDH10Q9P2E7 1040 aa18■□□□□ 0.47
TPM1-205ENST00000357980 GOLGA8SH3BPF8 625 aa17.99■□□□□ 0.47
TPM1-205ENST00000357980 TRAPPC3O43617 180 aa17.99■□□□□ 0.47
TPM1-205ENST00000357980 UPP2O95045 317 aa17.99■□□□□ 0.47
TPM1-205ENST00000357980 MAN1A1P33908 653 aa17.99■□□□□ 0.47
TPM1-205ENST00000357980 CTNNA1P35221 906 aaKnown RBP17.99■□□□□ 0.47
TPM1-205ENST00000357980 OGDHQ02218 1023 aa17.99■□□□□ 0.47
TPM1-205ENST00000357980 INTS6LQ5JSJ4 861 aaKnown RBP17.99■□□□□ 0.47
TPM1-205ENST00000357980 DCAF12L1Q5VU92 463 aa17.99■□□□□ 0.47
TPM1-205ENST00000357980 ALG3Q92685 438 aa17.99■□□□□ 0.47
TPM1-205ENST00000357980 KRT35Q92764 455 aa17.99■□□□□ 0.47
TPM1-205ENST00000357980 SELENOOQ9BVL4 669 aa17.99■□□□□ 0.47
TPM1-205ENST00000357980 IP6K2Q9UHH9 426 aa17.99■□□□□ 0.47
TPM1-205ENST00000357980 XPO1O14980 1071 aaKnown RBP17.98■□□□□ 0.47
TPM1-205ENST00000357980 SPOPO43791 374 aa17.98■□□□□ 0.47
TPM1-205ENST00000357980 EFCAB14O75071 495 aa17.98■□□□□ 0.47
TPM1-205ENST00000357980 TADA2AO75478 443 aa17.98■□□□□ 0.47
TPM1-205ENST00000357980 OAZ2O95190 189 aa17.98■□□□□ 0.47
TPM1-205ENST00000357980 ALDH2P05091 517 aa17.98■□□□□ 0.47
TPM1-205ENST00000357980 GALTP07902 379 aa17.98■□□□□ 0.47
TPM1-205ENST00000357980 KRT3P12035 628 aa17.98■□□□□ 0.47
TPM1-205ENST00000357980 NPR3P17342 541 aa17.98■□□□□ 0.47
TPM1-205ENST00000357980 SLC1A1P43005 524 aa17.98■□□□□ 0.47
TPM1-205ENST00000357980 MARCKSL1P49006 195 aa17.98■□□□□ 0.47
TPM1-205ENST00000357980 YWHAHQ04917 246 aaPredicted RBP17.98■□□□□ 0.47
TPM1-205ENST00000357980 CKAP4Q07065 602 aaKnown RBP17.98■□□□□ 0.47
TPM1-205ENST00000357980 DCUN1D2Q6PH85 259 aa17.98■□□□□ 0.47
TPM1-205ENST00000357980 FAM183BPQ6ZVS7 135 aa17.98■□□□□ 0.47
TPM1-205ENST00000357980 PIWIL1Q96J94 861 aaKnown RBP17.98■□□□□ 0.47
TPM1-205ENST00000357980 PBKQ96KB5 322 aa17.98■□□□□ 0.47
TPM1-205ENST00000357980 COLEC11Q9BWP8 271 aa17.98■□□□□ 0.47
TPM1-205ENST00000357980 RC3H2Q9HBD1 1191 aaKnown RBP17.98■□□□□ 0.47
TPM1-205ENST00000357980 RNF14Q9UBS8 474 aa17.98■□□□□ 0.47
TPM1-205ENST00000357980 LCMT1Q9UIC8 334 aa17.98■□□□□ 0.47
TPM1-205ENST00000357980 PATJQ8NI35 1801 aa17.98■□□□□ 0.47
TPM1-205ENST00000357980 EFCAB8A8MWE9 144 aa17.98■□□□□ 0.47
TPM1-205ENST00000357980 PIK3R2O00459 728 aa17.98■□□□□ 0.47
TPM1-205ENST00000357980 SYN3O14994 580 aa17.98■□□□□ 0.47
TPM1-205ENST00000357980 BEST1O76090 585 aa17.98■□□□□ 0.47
TPM1-205ENST00000357980 CTNNA2P26232 953 aa17.98■□□□□ 0.47
TPM1-205ENST00000357980 RFC1P35251 1148 aaPredicted RBP17.98■□□□□ 0.47
TPM1-205ENST00000357980 PEX5P50542 639 aa17.98■□□□□ 0.47
TPM1-205ENST00000357980 WDR5P61964 334 aaKnown RBP17.98■□□□□ 0.47
TPM1-205ENST00000357980 DEFB103AP81534 67 aa17.98■□□□□ 0.47
TPM1-205ENST00000357980 OLFML1Q6UWY5 402 aa17.98■□□□□ 0.47
TPM1-205ENST00000357980 CLEC20AQ6ZU45 233 aa17.98■□□□□ 0.47
TPM1-205ENST00000357980 FAM35AQ86V20 835 aa17.98■□□□□ 0.47
TPM1-205ENST00000357980 THEM5Q8N1Q8 247 aa17.98■□□□□ 0.47
TPM1-205ENST00000357980 NIPA2Q8N8Q9 360 aa17.98■□□□□ 0.47
TPM1-205ENST00000357980 JOSD2Q8TAC2 188 aa17.98■□□□□ 0.47
TPM1-205ENST00000357980 FNIP1Q8TF40 1166 aa17.98■□□□□ 0.47
TPM1-205ENST00000357980 MS4A14Q96JA4 679 aa17.98■□□□□ 0.47
TPM1-205ENST00000357980 HSFY1Q96LI6 401 aa17.98■□□□□ 0.47
TPM1-205ENST00000357980 TMEM209Q96SK2 561 aa17.98■□□□□ 0.47
TPM1-205ENST00000357980 CARD9Q9H257 536 aa17.98■□□□□ 0.47
TPM1-205ENST00000357980 METTL5Q9NRN9 209 aaKnown RBP17.98■□□□□ 0.47
TPM1-205ENST00000357980 KRT82Q9NSB4 513 aa17.98■□□□□ 0.47
TPM1-205ENST00000357980 EHD2Q9NZN4 543 aa17.98■□□□□ 0.47
TPM1-205ENST00000357980 FAN1Q9Y2M0 1017 aa17.98■□□□□ 0.47
TPM1-205ENST00000357980 CCDC66A2RUB6 948 aa17.97■□□□□ 0.47
TPM1-205ENST00000357980 PAPSS1O43252 624 aaPredicted RBP17.97■□□□□ 0.47
TPM1-205ENST00000357980 FAM200BP0CF97 657 aa17.97■□□□□ 0.47
TPM1-205ENST00000357980 ACRP10323 421 aa17.97■□□□□ 0.47
TPM1-205ENST00000357980 SNX16P57768 344 aa17.97■□□□□ 0.47
TPM1-205ENST00000357980 FAM102AQ5T9C2 384 aaPredicted RBP17.97■□□□□ 0.47
TPM1-205ENST00000357980 LRRTM3Q86VH5 581 aa17.97■□□□□ 0.47
TPM1-205ENST00000357980 TMEM173Q86WV6 379 aaPredicted RBP17.97■□□□□ 0.47
TPM1-205ENST00000357980 UBL4BQ8N7F7 174 aa17.97■□□□□ 0.47
TPM1-205ENST00000357980 MYLPFQ96A32 169 aa17.97■□□□□ 0.47
TPM1-205ENST00000357980 ZNF689Q96CS4 500 aaPredicted RBP17.97■□□□□ 0.47
TPM1-205ENST00000357980 MED10Q9BTT4 135 aa17.97■□□□□ 0.47
TPM1-205ENST00000357980 GPR62Q9BZJ7 368 aa17.97■□□□□ 0.47
TPM1-205ENST00000357980 CWH43Q9H720 699 aa17.97■□□□□ 0.47
TPM1-205ENST00000357980 IL23AQ9NPF7 189 aa17.97■□□□□ 0.47
TPM1-205ENST00000357980 TMEM30AQ9NV96 361 aa17.97■□□□□ 0.47
TPM1-205ENST00000357980 SMARCAL1Q9NZC9 954 aa17.97■□□□□ 0.47
TPM1-205ENST00000357980 PCDHA3Q9Y5H8 950 aa17.97■□□□□ 0.47
TPM1-205ENST00000357980 SF3B1O75533 1304 aaKnown RBP eCLIP17.96■□□□□ 0.479e-6■■■■■ 68.9
TPM1-205ENST00000357980 CTAGE15A4D2H0 777 aa17.96■□□□□ 0.47
TPM1-205ENST00000357980 BAIAP3O94812 1187 aa17.96■□□□□ 0.47
TPM1-205ENST00000357980 AMHP03971 560 aa17.96■□□□□ 0.47
TPM1-205ENST00000357980 CTAGE8P0CG41 777 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms