RNA–Protein interactions for RNA: ENST00000356316.7

CAPN3-204, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-204ENST00000356316 PHACTR2O75167 634 aa11.4□□□□□ -0.58
CAPN3-204ENST00000356316 ATP2C2O75185 946 aa11.4□□□□□ -0.58
CAPN3-204ENST00000356316 CLSTN1O94985 981 aa11.4□□□□□ -0.58
CAPN3-204ENST00000356316 TDGF1P13385 188 aa11.4□□□□□ -0.58
CAPN3-204ENST00000356316 HDCP19113 662 aa11.4□□□□□ -0.58
CAPN3-204ENST00000356316 LMO2P25791 158 aa11.4□□□□□ -0.58
CAPN3-204ENST00000356316 GNL1P36915 607 aaPredicted RBP11.4□□□□□ -0.58
CAPN3-204ENST00000356316 MAGEA11P43364 429 aa11.4□□□□□ -0.58
CAPN3-204ENST00000356316 CYP2J2P51589 502 aa11.4□□□□□ -0.58
CAPN3-204ENST00000356316 TNNC1P63316 161 aa11.4□□□□□ -0.58
CAPN3-204ENST00000356316 NR1H3Q13133 447 aa11.4□□□□□ -0.58
CAPN3-204ENST00000356316 TRPC3Q13507 836 aa11.4□□□□□ -0.58
CAPN3-204ENST00000356316 CCINQ13939 588 aa11.4□□□□□ -0.58
CAPN3-204ENST00000356316 GAS6Q14393 721 aa11.4□□□□□ -0.58
CAPN3-204ENST00000356316 KCNB1Q14721 858 aa11.4□□□□□ -0.58
CAPN3-204ENST00000356316 ATL3Q6DD88 541 aa11.4□□□□□ -0.58
CAPN3-204ENST00000356316 CNNM4Q6P4Q7 775 aa11.4□□□□□ -0.58
CAPN3-204ENST00000356316 FAM171BQ6P995 826 aa11.4□□□□□ -0.58
CAPN3-204ENST00000356316 SHC4Q6S5L8 630 aa11.4□□□□□ -0.58
CAPN3-204ENST00000356316 VSTM1Q6UX27 236 aa11.4□□□□□ -0.58
CAPN3-204ENST00000356316 Q6ZS52 159 aa11.4□□□□□ -0.58
CAPN3-204ENST00000356316 TRAPPC11Q7Z392 1133 aa11.4□□□□□ -0.58
CAPN3-204ENST00000356316 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.4□□□□□ -0.58
CAPN3-204ENST00000356316 OSTM1Q86WC4 334 aa11.4□□□□□ -0.58
CAPN3-204ENST00000356316 CEP57L1Q8IYX8 460 aa11.4□□□□□ -0.58
CAPN3-204ENST00000356316 CPA6Q8N4T0 437 aa11.4□□□□□ -0.58
CAPN3-204ENST00000356316 XXYLT1Q8NBI6 393 aa11.4□□□□□ -0.58
CAPN3-204ENST00000356316 STKLD1Q8NE28 680 aa11.4□□□□□ -0.58
CAPN3-204ENST00000356316 GLIS3Q8NEA6 775 aa11.4□□□□□ -0.58
CAPN3-204ENST00000356316 CXorf38Q8TB03 319 aa11.4□□□□□ -0.58
CAPN3-204ENST00000356316 SNX21Q969T3 373 aa11.4□□□□□ -0.58
CAPN3-204ENST00000356316 CCDC127Q96BQ5 260 aa11.4□□□□□ -0.58
CAPN3-204ENST00000356316 CEP295NLQ96MC4 621 aa11.4□□□□□ -0.58
CAPN3-204ENST00000356316 CYP2S1Q96SQ9 504 aa11.4□□□□□ -0.58
CAPN3-204ENST00000356316 SYT15Q9BQS2 421 aa11.4□□□□□ -0.58
CAPN3-204ENST00000356316 OCEL1Q9H607 264 aa11.4□□□□□ -0.58
CAPN3-204ENST00000356316 DUS2Q9NX74 493 aaKnown RBP11.4□□□□□ -0.58
CAPN3-204ENST00000356316 CGNQ9P2M7 1197 aaKnown RBP11.4□□□□□ -0.58
CAPN3-204ENST00000356316 CDV3Q9UKY7 258 aaKnown RBP11.4□□□□□ -0.58
CAPN3-204ENST00000356316 SLC8A2Q9UPR5 921 aa11.4□□□□□ -0.58
CAPN3-204ENST00000356316 UBE4BO95155 1302 aa11.39□□□□□ -0.59
CAPN3-204ENST00000356316 TRDMT1O14717 391 aaKnown RBP11.39□□□□□ -0.59
CAPN3-204ENST00000356316 CLIC2O15247 247 aa11.39□□□□□ -0.59
CAPN3-204ENST00000356316 HRO43593 1189 aa11.39□□□□□ -0.59
CAPN3-204ENST00000356316 PAPSS2O95340 614 aaPredicted RBP11.39□□□□□ -0.59
CAPN3-204ENST00000356316 RETP07949 1114 aa11.39□□□□□ -0.59
CAPN3-204ENST00000356316 FAM163BP0C2L3 166 aa11.39□□□□□ -0.59
CAPN3-204ENST00000356316 ZSCAN22P10073 491 aaPredicted RBP11.39□□□□□ -0.59
CAPN3-204ENST00000356316 DRD1P21728 446 aa11.39□□□□□ -0.59
CAPN3-204ENST00000356316 WARSP23381 471 aaKnown RBP11.39□□□□□ -0.59
CAPN3-204ENST00000356316 BDNFP23560 247 aa11.39□□□□□ -0.59
CAPN3-204ENST00000356316 HOXD13P35453 343 aa11.39□□□□□ -0.59
CAPN3-204ENST00000356316 IFNAR2P48551 515 aa11.39□□□□□ -0.59
CAPN3-204ENST00000356316 PSMC1P62191 440 aaKnown RBP11.39□□□□□ -0.59
CAPN3-204ENST00000356316 FAM160A1Q05DH4 1040 aa11.39□□□□□ -0.59
CAPN3-204ENST00000356316 SPEM2Q0P670 501 aa11.39□□□□□ -0.59
CAPN3-204ENST00000356316 MTF1Q14872 753 aa11.39□□□□□ -0.59
CAPN3-204ENST00000356316 WDR72Q3MJ13 1102 aa11.39□□□□□ -0.59
CAPN3-204ENST00000356316 TMEM196Q5HYL7 178 aa11.39□□□□□ -0.59
CAPN3-204ENST00000356316 SCARA3Q6AZY7 606 aa11.39□□□□□ -0.59
CAPN3-204ENST00000356316 TRIM68Q6AZZ1 485 aa11.39□□□□□ -0.59
CAPN3-204ENST00000356316 UNC13DQ70J99 1090 aa11.39□□□□□ -0.59
CAPN3-204ENST00000356316 EPM2AIP1Q7L775 607 aaPredicted RBP11.39□□□□□ -0.59
CAPN3-204ENST00000356316 NELFCDQ8IXH7 590 aa11.39□□□□□ -0.59
CAPN3-204ENST00000356316 OR6B3Q8NGW1 331 aa11.39□□□□□ -0.59
CAPN3-204ENST00000356316 MYCBPAPQ8TBZ2 947 aa11.39□□□□□ -0.59
CAPN3-204ENST00000356316 ATP2A3Q93084 1043 aa11.39□□□□□ -0.59
CAPN3-204ENST00000356316 FAM84AQ96KN4 292 aa11.39□□□□□ -0.59
CAPN3-204ENST00000356316 SPATA17Q96L03 361 aa11.39□□□□□ -0.59
CAPN3-204ENST00000356316 PKMYT1Q99640 499 aa11.39□□□□□ -0.59
CAPN3-204ENST00000356316 BLZF1Q9H2G9 400 aa11.39□□□□□ -0.59
CAPN3-204ENST00000356316 AGPAT3Q9NRZ7 376 aa11.39□□□□□ -0.59
CAPN3-204ENST00000356316 DLL3Q9NYJ7 618 aa11.39□□□□□ -0.59
CAPN3-204ENST00000356316 TRPM5Q9NZQ8 1165 aa11.39□□□□□ -0.59
CAPN3-204ENST00000356316 EP300Q09472 2414 aaPredicted RBP11.39□□□□□ -0.59
CAPN3-204ENST00000356316 F5P12259 2224 aa11.39□□□□□ -0.59
CAPN3-204ENST00000356316 PTPRJQ12913 1337 aa11.38□□□□□ -0.59
CAPN3-204ENST00000356316 OBSL1O75147 1896 aa11.38□□□□□ -0.59
CAPN3-204ENST00000356316 PVALEFA0A1B0GWK0 134 aa11.38□□□□□ -0.59
CAPN3-204ENST00000356316 K7ESF4 209 aa11.38□□□□□ -0.59
CAPN3-204ENST00000356316 TRIM66O15016 1216 aa11.38□□□□□ -0.59
CAPN3-204ENST00000356316 HCRTO43612 131 aa11.38□□□□□ -0.59
CAPN3-204ENST00000356316 FOXD2O60548 495 aaPredicted RBP11.38□□□□□ -0.59
CAPN3-204ENST00000356316 EXOC3O60645 756 aa11.38□□□□□ -0.59
CAPN3-204ENST00000356316 LRP3O75074 770 aa11.38□□□□□ -0.59
CAPN3-204ENST00000356316 ABL1P00519 1130 aa11.38□□□□□ -0.59
CAPN3-204ENST00000356316 CST3P01034 146 aaPredicted RBP11.38□□□□□ -0.59
CAPN3-204ENST00000356316 HOXA6P31267 233 aa11.38□□□□□ -0.59
CAPN3-204ENST00000356316 AFMP43652 599 aa11.38□□□□□ -0.59
CAPN3-204ENST00000356316 PPP3CCP48454 512 aa11.38□□□□□ -0.59
CAPN3-204ENST00000356316 GALK1P51570 392 aa11.38□□□□□ -0.59
CAPN3-204ENST00000356316 CYP24A1Q07973 514 aa11.38□□□□□ -0.59
CAPN3-204ENST00000356316 DMWDQ09019 674 aa11.38□□□□□ -0.59
CAPN3-204ENST00000356316 PSMD2Q13200 908 aa11.38□□□□□ -0.59
CAPN3-204ENST00000356316 PSMD6Q15008 389 aa11.38□□□□□ -0.59
CAPN3-204ENST00000356316 FBXO43Q4G163 708 aa11.38□□□□□ -0.59
CAPN3-204ENST00000356316 DENND5BQ6ZUT9 1274 aa11.38□□□□□ -0.59
CAPN3-204ENST00000356316 ARL14EPQ8N8R7 260 aaPredicted RBP11.38□□□□□ -0.59
CAPN3-204ENST00000356316 CCDC26Q8TAB7 109 aa11.38□□□□□ -0.59
CAPN3-204ENST00000356316 GOLGA5Q8TBA6 731 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms